RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C DAS1P47005 663 aa6.17□□□□□ -1.42
MDH3YDL078C STB4P50104 949 aa6.17□□□□□ -1.42
MDH3YDL078C NUT1P53114 1132 aa6.17□□□□□ -1.42
MDH3YDL078C TIM8P57744 87 aa6.17□□□□□ -1.42
MDH3YDL078C ISU2Q12056 156 aa6.17□□□□□ -1.42
MDH3YDL078C CTF3Q12748 733 aa6.17□□□□□ -1.42
MDH3YDL078C LAA1P39526 2014 aa6.16□□□□□ -1.42
MDH3YDL078C VPS3P23643 1011 aa6.16□□□□□ -1.42
MDH3YDL078C RAD27P26793 382 aa6.16□□□□□ -1.42
MDH3YDL078C SIP5P40210 489 aaKnown RBP6.16□□□□□ -1.42
MDH3YDL078C YIR016WP40572 265 aa6.16□□□□□ -1.42
MDH3YDL078C YJL045WP47052 634 aa6.16□□□□□ -1.42
MDH3YDL078C YGR237CP50089 785 aa6.16□□□□□ -1.42
MDH3YDL078C NOP13P53883 403 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
MDH3YDL078C STP1Q00947 519 aa6.16□□□□□ -1.42
MDH3YDL078C GIR2Q03768 265 aaPredicted RBP6.16□□□□□ -1.42
MDH3YDL078C TIF35Q04067 274 aaKnown RBP6.16□□□□□ -1.42
MDH3YDL078C COG4Q06096 861 aa6.16□□□□□ -1.42
MDH3YDL078C YLR257WQ06146 321 aaKnown RBP6.16□□□□□ -1.42
MDH3YDL078C GLE1Q12315 538 aa6.16□□□□□ -1.42
MDH3YDL078C GAL80P04387 435 aa6.15□□□□□ -1.42
MDH3YDL078C SLY41P22215 453 aa6.15□□□□□ -1.42
MDH3YDL078C SPT5P27692 1063 aaKnown RBP6.15□□□□□ -1.42
MDH3YDL078C EFB1P32471 206 aaKnown RBP6.15□□□□□ -1.42
MDH3YDL078C YKL023WP36103 277 aaKnown RBP6.15□□□□□ -1.42
MDH3YDL078C RGD1P38339 666 aa6.15□□□□□ -1.42
MDH3YDL078C CTM1P38818 585 aa6.15□□□□□ -1.42
MDH3YDL078C MOB1P40484 314 aa6.15□□□□□ -1.42
MDH3YDL078C MAF1P41910 395 aa6.15□□□□□ -1.42
MDH3YDL078C STU2P46675 888 aa6.15□□□□□ -1.42
MDH3YDL078C FYV8P46949 817 aaKnown RBP6.15□□□□□ -1.42
MDH3YDL078C POL31P46957 487 aa6.15□□□□□ -1.42
MDH3YDL078C BFA1P47113 574 aa6.15□□□□□ -1.42
MDH3YDL078C COS5P47187 383 aa6.15□□□□□ -1.42
MDH3YDL078C LSC2P53312 427 aa6.15□□□□□ -1.42
MDH3YDL078C SPC98P53540 846 aa6.15□□□□□ -1.42
MDH3YDL078C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
MDH3YDL078C SNU56Q03782 492 aaKnown RBP6.15□□□□□ -1.42
MDH3YDL078C GGA1Q06336 557 aa6.15□□□□□ -1.42
MDH3YDL078C AFT2Q08957 416 aa6.15□□□□□ -1.42
MDH3YDL078C TRS33Q99394 268 aa6.15□□□□□ -1.42
MDH3YDL078C SNF1P06782 633 aaKnown RBP6.14□□□□□ -1.43
MDH3YDL078C MAS1P10507 462 aa6.14□□□□□ -1.43
MDH3YDL078C SAF1P38352 637 aa6.14□□□□□ -1.43
MDH3YDL078C RRM3P38766 723 aa6.14□□□□□ -1.43
MDH3YDL078C RTT107P38850 1070 aa6.14□□□□□ -1.43
MDH3YDL078C UBP5P39944 805 aa6.14□□□□□ -1.43
MDH3YDL078C SEC9P40357 651 aa6.14□□□□□ -1.43
MDH3YDL078C AIM20P40451 204 aa6.14□□□□□ -1.43
MDH3YDL078C LEM3P42838 414 aa6.14□□□□□ -1.43
MDH3YDL078C YNL108CP53929 270 aa6.14□□□□□ -1.43
MDH3YDL078C RPA49Q01080 415 aaPredicted RBP6.14□□□□□ -1.43
MDH3YDL078C TBF1Q02457 562 aa6.14□□□□□ -1.43
MDH3YDL078C HCR1Q05775 265 aaKnown RBP6.14□□□□□ -1.43
MDH3YDL078C CDD1Q06549 142 aa6.14□□□□□ -1.43
MDH3YDL078C YOL075CQ08234 1294 aa6.14□□□□□ -1.43
MDH3YDL078C FAL1Q12099 399 aaKnown RBP6.14□□□□□ -1.43
MDH3YDL078C NFI1Q12216 726 aa6.14□□□□□ -1.43
MDH3YDL078C SFI1Q12369 946 aa6.14□□□□□ -1.43
MDH3YDL078C GIS3Q12418 502 aa6.14□□□□□ -1.43
MDH3YDL078C CDC37P06101 506 aaKnown RBP6.13□□□□□ -1.43
MDH3YDL078C PGS1P25578 521 aa6.13□□□□□ -1.43
MDH3YDL078C GSY2P27472 705 aa6.13□□□□□ -1.43
MDH3YDL078C PUP2P32379 260 aa6.13□□□□□ -1.43
MDH3YDL078C PEX2P32800 271 aa6.13□□□□□ -1.43
MDH3YDL078C KDX1P36005 433 aa6.13□□□□□ -1.43
MDH3YDL078C ADE17P38009 592 aaKnown RBP6.13□□□□□ -1.43
MDH3YDL078C TBS1P38114 1094 aa6.13□□□□□ -1.43
MDH3YDL078C SHE3P38272 425 aaKnown RBP6.13□□□□□ -1.43
MDH3YDL078C PCM1P38628 557 aaKnown RBP6.13□□□□□ -1.43
MDH3YDL078C PEX28P38848 579 aa6.13□□□□□ -1.43
MDH3YDL078C KAP123P40069 1113 aaKnown RBP6.13□□□□□ -1.43
MDH3YDL078C IAH1P41734 238 aa6.13□□□□□ -1.43
MDH3YDL078C FIG4P42837 879 aa6.13□□□□□ -1.43
MDH3YDL078C AIP1P46680 615 aaKnown RBP6.13□□□□□ -1.43
MDH3YDL078C ALT1P52893 592 aa6.13□□□□□ -1.43
MDH3YDL078C ADA2Q02336 434 aa6.13□□□□□ -1.43
MDH3YDL078C GFD1Q04839 188 aaKnown RBP6.13□□□□□ -1.43
MDH3YDL078C UTP13Q05946 817 aaKnown RBP6.13□□□□□ -1.43
MDH3YDL078C ORM2Q06144 216 aa6.13□□□□□ -1.43
MDH3YDL078C RGA2Q06407 1009 aa6.13□□□□□ -1.43
MDH3YDL078C ARR1Q06596 294 aa6.13□□□□□ -1.43
MDH3YDL078C IWR1Q07532 353 aaPredicted RBP6.13□□□□□ -1.43
MDH3YDL078C TAF10Q12030 206 aa6.13□□□□□ -1.43
MDH3YDL078C SPE1P08432 466 aa6.12□□□□□ -1.43
MDH3YDL078C MCM1P11746 286 aa6.12□□□□□ -1.43
MDH3YDL078C HMG2P12684 1045 aa6.12□□□□□ -1.43
MDH3YDL078C APE1P14904 514 aa6.12□□□□□ -1.43
MDH3YDL078C IME1P21190 360 aa6.12□□□□□ -1.43
MDH3YDL078C MRC1P25588 1096 aa6.12□□□□□ -1.43
MDH3YDL078C APL1P27351 700 aa6.12□□□□□ -1.43
MDH3YDL078C SLA2P33338 968 aa6.12□□□□□ -1.43
MDH3YDL078C YBR284WP38150 797 aa6.12□□□□□ -1.43
MDH3YDL078C NPR3P38742 1146 aa6.12□□□□□ -1.43
MDH3YDL078C RVS167P39743 482 aaKnown RBP6.12□□□□□ -1.43
MDH3YDL078C CEP3P40969 608 aa6.12□□□□□ -1.43
MDH3YDL078C TAF1P46677 1066 aa6.12□□□□□ -1.43
MDH3YDL078C YGL140CP53120 1219 aa6.12□□□□□ -1.43
MDH3YDL078C EBS1Q03466 884 aaKnown RBP6.12□□□□□ -1.43
MDH3YDL078C STE20Q03497 939 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms