RNA–Protein interactions for RNA: YCR083W

TRX3, Transcript of Mitochondrial thioredoxin, yeast

Gene TRX3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRX3	YCR083W	ERO1	Q03103	563 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	YDR341C	Q05506	607 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	PUS7	Q08647	676 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	AFT2	Q08957	416 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	TIP41	Q12199	356 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	PUS1	Q12211	544 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	HBN1	Q96VH4	193 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	PET123	P17558	318 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	TSR4	P25040	408 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	HIR1	P32479	840 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	SFA1	P32771	386 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	LTV1	P34078	463 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	PNT1	P38969	423 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	LYS14	P40971	790 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	YFL054C	P43549	646 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
TRX3	YCR083W	HSV2	P50079	448 aa	Predicted RBP	4.04	□□□□□ -1.76
TRX3	YCR083W	RTC4	P53850	401 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	NSG2	P53898	299 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	EAR1	Q03212	550 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	VPS60	Q03390	229 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	GIC2	Q06648	383 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	YPR071W	Q12346	211 aa		4.04	□□□□□ -1.76
TRX3	YCR083W	FLO11	P08640	1367 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	AI3	P03877	415 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	CDC37	P06101	506 aa	Known RBP	4.03	□□□□□ -1.76
TRX3	YCR083W	MSD1	P15179	658 aa	Known RBP	4.03	□□□□□ -1.76
TRX3	YCR083W	THR4	P16120	514 aa	Known RBP	4.03	□□□□□ -1.76
TRX3	YCR083W	SRP54	P20424	541 aa	Known RBP	4.03	□□□□□ -1.76
TRX3	YCR083W	STE11	P23561	717 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	SAS3	P34218	831 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	YET1	P35723	206 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	SAP190	P36123	1033 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	YRO2	P38079	344 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	PCH2	P38126	564 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	BCD1	P38772	366 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	TOM71	P38825	639 aa	Known RBP	4.03	□□□□□ -1.76
TRX3	YCR083W	RTT107	P38850	1070 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	VPS8	P39702	1274 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	AIP1	P46680	615 aa	Known RBP	4.03	□□□□□ -1.76
TRX3	YCR083W	ALT1	P52893	592 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	ALF1	P53904	254 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	EIS1	Q05050	843 aa	Known RBP	4.03	□□□□□ -1.76
TRX3	YCR083W	PSR2	Q07949	397 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	NTG2	Q08214	380 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	ACM1	Q08981	209 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	HMI1	Q12039	706 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	CLF1	Q12309	687 aa	Predicted RBP	4.03	□□□□□ -1.76
TRX3	YCR083W	GRX6	Q12438	231 aa		4.03	□□□□□ -1.76
TRX3	YCR083W	QCR6	P00127	147 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	UBC1	P21734	215 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	SRM1	P21827	482 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	SPO11	P23179	398 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	RRP43	P25359	394 aa	Predicted RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	MRC1	P25588	1096 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	MSH2	P25847	964 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	SEC65	P29478	273 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	NAM7	P30771	971 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	PRO1	P32264	428 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	YSC84	P32793	468 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	WHI3	P34761	661 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	MDJ1	P35191	511 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	UGA2	P38067	497 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	ERT1	P38140	529 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	MCX1	P38323	520 aa	Predicted RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	ERG7	P38604	731 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	SPT8	P38915	602 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	STT3	P39007	718 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	CAJ1	P39101	391 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	CIN4	P39110	191 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	SAH1	P39954	449 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	RPN3	P40016	523 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	SEC9	P40357	651 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	YFL066C	P43538	392 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	APT1	P49435	187 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	YGR237C	P50089	785 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	CAF130	P53280	1122 aa	Predicted RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	TNA1	P53322	534 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	RET3	P53600	189 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
TRX3	YCR083W	ERG5	P54781	538 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	SRP1	Q02821	542 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	PRP42	Q03776	544 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	UTP14	Q04500	899 aa	Known RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	VPS38	Q05919	439 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	ACK1	Q07622	623 aa	Predicted RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	YAP7	Q08182	245 aa		4.02	□□□□□ -1.77
TRX3	YCR083W	KEL3	Q08979	651 aa	Predicted RBP	4.02	□□□□□ -1.77
TRX3	YCR083W	ADE8	P04161	214 aa		4.01	□□□□□ -1.77
TRX3	YCR083W	RPS7A	P26786	190 aa	Known RBP	4.01	□□□□□ -1.77
TRX3	YCR083W	DPB3	P27344	201 aa		4.01	□□□□□ -1.77
TRX3	YCR083W	PSO2	P30620	661 aa		4.01	□□□□□ -1.77
TRX3	YCR083W	DOM34	P33309	386 aa		4.01	□□□□□ -1.77
TRX3	YCR083W	SLA2	P33338	968 aa		4.01	□□□□□ -1.77
TRX3	YCR083W	STO1	P34160	861 aa	Known RBP	4.01	□□□□□ -1.77
TRX3	YCR083W	EFM2	P38347	419 aa		4.01	□□□□□ -1.77
TRX3	YCR083W	YHL012W	P38709	493 aa		4.01	□□□□□ -1.77
TRX3	YCR083W	MIP6	P38760	659 aa	Known RBP	4.01	□□□□□ -1.77
TRX3	YCR083W	CTM1	P38818	585 aa		4.01	□□□□□ -1.77
TRX3	YCR083W	CCT3	P39077	534 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms