RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	YGR153W	P48238	217 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	GCV2	P49095	1034 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	IMD3	P50095	523 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	COG6	P53959	839 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	LGE1	Q02796	332 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	FUS2	Q05670	677 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	HCR1	Q05775	265 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	YPR097W	Q06839	1073 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	ADY3	Q07732	790 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	ATP16	Q12165	160 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	ACF2	Q12168	779 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	IES3	Q12345	250 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	RKM4	Q12504	494 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	YML002W	P0CF17	737 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	CBF1	P17106	351 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	KIP2	P28743	706 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	JNM1	P36224	373 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	PCF11	P39081	626 aa	Predicted RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	DPH1	P40487	425 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	SGM1	P47166	707 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	TRF5	P48561	642 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	ATG1	P53104	897 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	ORC4	P54791	529 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	ACL4	Q03771	387 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	NBA1	Q08229	501 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	CDC53	Q12018	815 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	RTC5	Q12108	567 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	HSC82	P15108	705 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	CLB2	P24869	491 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	HXT3	P32466	567 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	UIP5	P36137	443 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	YHR020W	P38708	688 aa	Known RBP	4.27	□□□□□ -1.73
PIM1	YBL022C	AKR1	P39010	764 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	CCT6	P39079	546 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	MAM33	P40513	266 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	SYO1	Q07395	620 aa		4.27	□□□□□ -1.73
PIM1	YBL022C	TRP2	P00899	507 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	TSR4	P25040	408 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	RPC53	P25441	422 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	SLX5	P32828	619 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	ECM31	P38122	312 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	FES1	P38260	290 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	CRG1	P38892	291 aa	RIP-Chip data	4.26	□□□□□ -1.73	RIP-Chip
PIM1	YBL022C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
PIM1	YBL022C	TMN3	P40071	706 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	BRO1	P48582	844 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	YPL034W	Q03083	165 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	YLR287C	Q05881	355 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	RGC1	Q06108	1083 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	ATG17	Q06410	417 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	CLP1	Q08685	445 aa	Predicted RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	RKM1	Q08961	583 aa	Predicted RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	CMD1	P06787	147 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	URE2	P23202	354 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	TPO5	P36029	618 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	GLO3	P38682	493 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	STM1	P39015	273 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	PRK1	P40494	810 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	CAB2	P40506	365 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	SNL1	P40548	159 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	PTK2	P47116	818 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	HAM1	P47119	197 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	UBP15	P50101	1230 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	LSG1	P53145	640 aa	Known RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	YNR063W	P53749	607 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	TAF12	Q03761	539 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	VPS64	Q03944	604 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	ARP6	Q12509	438 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	BRR1	Q99177	341 aa	Predicted RBP	4.26	□□□□□ -1.73
PIM1	YBL022C	GSC2	P40989	1895 aa		4.26	□□□□□ -1.73
PIM1	YBL022C	ATR1	P13090	542 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	MAE1	P36013	669 aa	Known RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	YBR139W	P38109	508 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	YHR045W	P38775	560 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	PCI8	P40512	444 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	ALG2	P43636	503 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	HPC2	Q01448	625 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	ABZ2	Q03266	374 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	CSR1	Q06705	408 aa	Known RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	INP54	Q08227	384 aa	Known RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	GRX6	Q12438	231 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	URA3	P03962	267 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	COR1	P07256	457 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	GCN3	P14741	305 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	NMT1	P14743	455 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	SRP101	P32916	621 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	BMH2	P34730	273 aa	Known RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	ERT1	P38140	529 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	HAL5	P38970	855 aa	Known RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	LCP5	P40079	357 aa	Predicted RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	MNN11	P46985	422 aa	Known RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	KEL2	P50090	882 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	PSP2	P50109	593 aa	Known RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	ECM11	Q04110	302 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	ASA1	Q06822	443 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	ISY1	P21374	235 aa	Predicted RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	TPS2	P31688	896 aa	Known RBP	4.25	□□□□□ -1.73
PIM1	YBL022C	ASF1	P32447	279 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	YSC84	P32793	468 aa		4.25	□□□□□ -1.73
PIM1	YBL022C	RER2	P35196	286 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms