RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W CEG1Q01159 459 aaPredicted RBP2.51□□□□□ -2.01
SNC1YAL030W YMR210WQ03649 449 aa2.51□□□□□ -2.01
SNC1YAL030W HMO1Q03973 246 aaKnown RBP2.51□□□□□ -2.01
SNC1YAL030W MUS81Q04149 632 aaPredicted RBP2.51□□□□□ -2.01
SNC1YAL030W EIS1Q05050 843 aaKnown RBP2.51□□□□□ -2.01
SNC1YAL030W SGD1Q06132 899 aa2.51□□□□□ -2.01
SNC1YAL030W OMS1Q06668 471 aa2.51□□□□□ -2.01
SNC1YAL030W MED7Q08278 222 aa2.51□□□□□ -2.01
SNC1YAL030W YOL114CQ12322 202 aa2.51□□□□□ -2.01
SNC1YAL030W VPS5Q92331 675 aa2.51□□□□□ -2.01
SNC1YAL030W CDC6P09119 513 aa2.5□□□□□ -2.01
SNC1YAL030W PYC1P11154 1178 aaKnown RBP2.5□□□□□ -2.01
SNC1YAL030W GLN4P13188 809 aaKnown RBP2.5□□□□□ -2.01
SNC1YAL030W ATP12P22135 325 aa2.5□□□□□ -2.01
SNC1YAL030W IMG2P25642 146 aaPredicted RBP2.5□□□□□ -2.01
SNC1YAL030W SEC21P32074 935 aaKnown RBP2.5□□□□□ -2.01
SNC1YAL030W DBF20P32328 564 aa2.5□□□□□ -2.01
SNC1YAL030W PET127P32606 800 aa2.5□□□□□ -2.01
SNC1YAL030W APT2P36973 181 aa2.5□□□□□ -2.01
SNC1YAL030W EXO84P38261 753 aa2.5□□□□□ -2.01
SNC1YAL030W YBR259WP38338 688 aa2.5□□□□□ -2.01
SNC1YAL030W YHR202WP38887 602 aa2.5□□□□□ -2.01
SNC1YAL030W SAK1P38990 1142 aa2.5□□□□□ -2.01
SNC1YAL030W DUN1P39009 513 aa2.5□□□□□ -2.01
SNC1YAL030W STL1P39932 569 aa2.5□□□□□ -2.01
SNC1YAL030W EXG2P52911 562 aa2.5□□□□□ -2.01
SNC1YAL030W NCS6P53088 359 aa2.5□□□□□ -2.01
SNC1YAL030W ARG5,6Q01217 863 aa2.5□□□□□ -2.01
SNC1YAL030W REC102Q02721 264 aa2.5□□□□□ -2.01
SNC1YAL030W LEE1Q02799 301 aaKnown RBP2.5□□□□□ -2.01
SNC1YAL030W YML131WQ03102 365 aa2.5□□□□□ -2.01
SNC1YAL030W PPN1Q04119 674 aa2.5□□□□□ -2.01
SNC1YAL030W OPY2Q06810 360 aa2.5□□□□□ -2.01
SNC1YAL030W NOP12Q08208 459 aaKnown RBP2.5□□□□□ -2.01
SNC1YAL030W HMI1Q12039 706 aa2.5□□□□□ -2.01
SNC1YAL030W NUR1Q12066 484 aa2.5□□□□□ -2.01
SNC1YAL030W SWM1Q12379 170 aa2.5□□□□□ -2.01
SNC1YAL030W ATG11Q12527 1178 aa2.5□□□□□ -2.01
SNC1YAL030W YLR415CO13578 112 aa2.49□□□□□ -2.01
SNC1YAL030W TUB3P09734 445 aaKnown RBP2.49□□□□□ -2.01
SNC1YAL030W YEL076C-AP0CX16 216 aa2.49□□□□□ -2.01
SNC1YAL030W YLR464WP0CX17 216 aa2.49□□□□□ -2.01
SNC1YAL030W HSC82P15108 705 aaKnown RBP2.49□□□□□ -2.01
SNC1YAL030W APA1P16550 321 aaKnown RBP2.49□□□□□ -2.01
SNC1YAL030W IME1P21190 360 aa2.49□□□□□ -2.01
SNC1YAL030W PRP22P24384 1145 aaKnown RBP2.49□□□□□ -2.01
SNC1YAL030W DGR2P32330 852 aa2.49□□□□□ -2.01
SNC1YAL030W YPT7P32939 208 aa2.49□□□□□ -2.01
SNC1YAL030W LRG1P35688 1017 aa2.49□□□□□ -2.01
SNC1YAL030W YKR073CP36153 106 aa2.49□□□□□ -2.01
SNC1YAL030W TOS1P38288 455 aa2.49□□□□□ -2.01
SNC1YAL030W YEL076CP39971 216 aa2.49□□□□□ -2.01
SNC1YAL030W VPS27P40343 622 aaKnown RBP2.49□□□□□ -2.01
SNC1YAL030W YIL092WP40497 633 aa2.49□□□□□ -2.01
SNC1YAL030W VHR1P40522 640 aa2.49□□□□□ -2.01
SNC1YAL030W TAF1P46677 1066 aa2.49□□□□□ -2.01
SNC1YAL030W PRP31P49704 494 aaPredicted RBP2.49□□□□□ -2.01
SNC1YAL030W SPO1P53541 631 aa2.49□□□□□ -2.01
SNC1YAL030W NRD1P53617 575 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01 RIP-Chip
SNC1YAL030W TEP1P53916 434 aa2.49□□□□□ -2.01
SNC1YAL030W PKH1Q03407 766 aa2.49□□□□□ -2.01
SNC1YAL030W TRS130Q03660 1102 aa2.49□□□□□ -2.01
SNC1YAL030W YDR132CQ03900 495 aa2.49□□□□□ -2.01
SNC1YAL030W TRI1Q05024 226 aa2.49□□□□□ -2.01
SNC1YAL030W ASM4Q05166 528 aa2.49□□□□□ -2.01
SNC1YAL030W DUS4Q06063 367 aa2.49□□□□□ -2.01
SNC1YAL030W BLS1Q06071 122 aa2.49□□□□□ -2.01
SNC1YAL030W COG4Q06096 861 aa2.49□□□□□ -2.01
SNC1YAL030W YPS7Q06325 596 aa2.49□□□□□ -2.01
SNC1YAL030W STP4Q07351 490 aa2.49□□□□□ -2.01
SNC1YAL030W WHI4Q07655 649 aaKnown RBP2.49□□□□□ -2.01
SNC1YAL030W NGL1Q08213 363 aaKnown RBP2.49□□□□□ -2.01
SNC1YAL030W YOR352WQ08816 343 aa2.49□□□□□ -2.01
SNC1YAL030W GPB1Q08886 897 aa2.49□□□□□ -2.01
SNC1YAL030W CWC2Q12046 339 aaPredicted RBP2.49□□□□□ -2.01
SNC1YAL030W YDL177CQ12257 170 aa2.49□□□□□ -2.01
SNC1YAL030W RRI2Q12348 645 aa2.49□□□□□ -2.01
SNC1YAL030W TRP3P00937 484 aa2.48□□□□□ -2.01
SNC1YAL030W ERG20P08524 352 aaKnown RBP2.48□□□□□ -2.01
SNC1YAL030W FRS1P15624 595 aaKnown RBP2.48□□□□□ -2.01
SNC1YAL030W PRP4P20053 465 aaKnown RBP2.48□□□□□ -2.01
SNC1YAL030W ADE2P21264 571 aaKnown RBP2.48□□□□□ -2.01
SNC1YAL030W EMC1P25574 760 aa2.48□□□□□ -2.01
SNC1YAL030W MSH1P25846 959 aa2.48□□□□□ -2.01
SNC1YAL030W PUB1P32588 453 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SNC1YAL030W XRS2P33301 854 aa2.48□□□□□ -2.01
SNC1YAL030W TGL1P34163 548 aa2.48□□□□□ -2.01
SNC1YAL030W MAC1P35192 417 aa2.48□□□□□ -2.01
SNC1YAL030W ETP1P38748 585 aaKnown RBP2.48□□□□□ -2.01
SNC1YAL030W LAM1P38851 1228 aa2.48□□□□□ -2.01
SNC1YAL030W ERP2P39704 215 aa2.48□□□□□ -2.01
SNC1YAL030W SWD1P39706 426 aa2.48□□□□□ -2.01
SNC1YAL030W EAF5P39995 279 aa2.48□□□□□ -2.01
SNC1YAL030W VID27P40157 782 aa2.48□□□□□ -2.01
SNC1YAL030W RPT2P40327 437 aaKnown RBP2.48□□□□□ -2.01
SNC1YAL030W RAD26P40352 1085 aa2.48□□□□□ -2.01
SNC1YAL030W IML2P47031 731 aa2.48□□□□□ -2.01
SNC1YAL030W TAF4P50105 388 aa2.48□□□□□ -2.01
SNC1YAL030W PEF1P53238 335 aa2.48□□□□□ -2.01
SNC1YAL030W CPR6P53691 371 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 81 ms