RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 ATG3Q9NT62 314 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 PCDHB3Q9Y5E6 796 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 ACTN4O43707 911 aaKnown RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 PRKAR2BP31323 418 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 LINC01559Q495D7 138 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 GRIPAP1Q4V328 841 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 SULT6B1Q6IMI4 303 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 CAPN12Q6ZSI9 719 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 ZNF687Q8N1G0 1237 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 THAP11Q96EK4 314 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 PHACTR3Q96KR7 559 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 FKBPLQ9UIM3 349 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 KIAA1024Q9UPX6 916 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 ABCC12Q96J65 1359 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 USP17L5A8MUK1 530 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 PPP4CP60510 307 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 LSM11P83369 360 aaKnown RBP eCLIP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 SLC10A5Q5PT55 438 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 BRICD5Q6PL45 260 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 MYH16Q9H6N6 1097 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 ANO2Q9NQ90 1003 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 GREB1LQ9C091 1923 aaPredicted RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 ATP9BO43861 1147 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 GIGYF1O75420 1035 aaPredicted RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 F12P00748 615 aaPredicted RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 CYP19A1P11511 503 aaPredicted RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 MMP14P50281 582 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 EIF5P55010 431 aaKnown RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 PIP4K2BP78356 416 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 MTMR3Q13615 1198 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 KMT5BQ4FZB7 885 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 CC2D1BQ5T0F9 858 aaKnown RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 ZNF790Q6PG37 636 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 TOM1L2Q6ZVM7 507 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 NKX2-3Q8TAU0 364 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 RNF166Q96A37 237 aaPredicted RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 VPS33BQ9H267 617 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 VRTNQ9H8Y1 702 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 MKRN1Q9UHC7 482 aaKnown RBP3.93□□□□□ -1.78
CCDC178-213ENST00000583930 PCDHB9Q9Y5E1 797 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 KAT6BQ8WYB5 2073 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 FANCIQ9NVI1 1328 aa3.93□□□□□ -1.78
CCDC178-213ENST00000583930 CCDC88AQ3V6T2 1871 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 ZBBXA8MT70 800 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 MTX1Q13505 466 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 INTS5Q6P9B9 1019 aaKnown RBP3.92□□□□□ -1.78
CCDC178-213ENST00000583930 AKAP11Q9UKA4 1901 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 CACNA1SQ13698 1873 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 HRO43593 1189 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 RPS6KA4O75676 772 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 PTPN5P54829 565 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 CLDN10P78369 228 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 WDR43Q15061 677 aaKnown RBP eCLIP3.92□□□□□ -1.78
CCDC178-213ENST00000583930 PIGBQ92521 554 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 WNT2BQ93097 391 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 C8orf37Q96NL8 207 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 FMNL2Q96PY5 1086 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 NUDT12Q9BQG2 462 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 PDS5AQ29RF7 1337 aaKnown RBP3.92□□□□□ -1.78
CCDC178-213ENST00000583930 LTBP3Q9NS15 1303 aa3.92□□□□□ -1.78
CCDC178-213ENST00000583930 ZC3H4Q9UPT8 1303 aaKnown RBP3.92□□□□□ -1.78
CCDC178-213ENST00000583930 COL2A1P02458 1487 aaPredicted RBP3.92□□□□□ -1.78
CCDC178-213ENST00000583930 SNRPA1P09661 255 aaKnown RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 RASA1P20936 1047 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 ZC3H6P61129 1189 aaKnown RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 XPCQ01831 940 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 NR1H3Q13133 447 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 CCDC184Q52MB2 194 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 C1orf141Q5JVX7 400 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 ZNF530Q6P9A1 599 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 C15orf52Q6ZUT6 534 aaKnown RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 ADAM32Q8TC27 787 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 KCTD12Q96CX2 325 aaKnown RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 SLC4A9Q96Q91 983 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 NOVA2Q9UNW9 492 aaKnown RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 MAPK8IP3Q9UPT6 1336 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 ADCY9O60503 1353 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 SOWAHBA6NEL2 793 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 GOLGA8CPA6NN73 597 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 SOCS7O14512 581 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 PPEF1O14829 653 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 INTS3Q68E01 1043 aaKnown RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 SPSB2Q99619 263 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 DDX21Q9NR30 783 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 HYPKQ9NX55 129 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 AK9Q5TCS8 1911 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 CARMIL3Q8ND23 1372 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 USP42Q9H9J4 1324 aaKnown RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 PRMT3O60678 531 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 VAMP4O75379 141 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 TM4SF1P30408 202 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 SLC4A3P48751 1232 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 CASP7P55210 303 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 EVA1CP58658 441 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 CHRNA2Q15822 529 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 MEX3CQ5U5Q3 659 aaKnown RBP3.91□□□□□ -1.78
CCDC178-213ENST00000583930 ZNF34Q8IZ26 560 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 MKNK1Q9BUB5 465 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 ISCA1Q9BUE6 129 aa3.91□□□□□ -1.78
CCDC178-213ENST00000583930 COL1A1P02452 1464 aaPredicted RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms