RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 RIMBP3BA6NNM3 1639 aa6.7□□□□□ -1.34
SRP54-212ENST00000556992 RIMBP3Q9UFD9 1639 aa6.7□□□□□ -1.34
SRP54-212ENST00000556992 Q6ZS46 218 aa6.7□□□□□ -1.34
SRP54-212ENST00000556992 ACAD11Q709F0 780 aa6.7□□□□□ -1.34
SRP54-212ENST00000556992 RBSNQ9H1K0 784 aa6.7□□□□□ -1.34
SRP54-212ENST00000556992 GOLGA2P5Q9HBQ8 144 aa6.7□□□□□ -1.34
SRP54-212ENST00000556992 C11orf16Q9NQ32 467 aa6.7□□□□□ -1.34
SRP54-212ENST00000556992 NOVA2Q9UNW9 492 aaKnown RBP6.7□□□□□ -1.34
SRP54-212ENST00000556992 RAXQ9Y2V3 346 aa6.7□□□□□ -1.34
SRP54-212ENST00000556992 GAPVD1Q14C86 1478 aa6.69□□□□□ -1.34
SRP54-212ENST00000556992 ADAMTS4O75173 837 aa6.69□□□□□ -1.34
SRP54-212ENST00000556992 CEP135Q66GS9 1140 aa6.69□□□□□ -1.34
SRP54-212ENST00000556992 NLRP13Q86W25 1043 aa6.69□□□□□ -1.34
SRP54-212ENST00000556992 ARMC10Q8N2F6 343 aa6.69□□□□□ -1.34
SRP54-212ENST00000556992 PPME1Q9Y570 386 aa6.69□□□□□ -1.34
SRP54-212ENST00000556992 A6NJR5 290 aa6.68□□□□□ -1.34
SRP54-212ENST00000556992 UBAP1LF5GYI3 381 aa6.68□□□□□ -1.34
SRP54-212ENST00000556992 DDX3YO15523 660 aaKnown RBP6.68□□□□□ -1.34
SRP54-212ENST00000556992 IGLV1-40P01703 118 aa6.68□□□□□ -1.34
SRP54-212ENST00000556992 SOX18P35713 384 aa6.68□□□□□ -1.34
SRP54-212ENST00000556992 NAA30Q147X3 362 aaPredicted RBP6.68□□□□□ -1.34
SRP54-212ENST00000556992 CYB5RLQ6IPT4 315 aa6.68□□□□□ -1.34
SRP54-212ENST00000556992 RASSF4Q9H2L5 321 aa6.68□□□□□ -1.34
SRP54-212ENST00000556992 STOML1Q9UBI4 398 aa6.68□□□□□ -1.34
SRP54-212ENST00000556992 OAS3Q9Y6K5 1087 aaKnown RBP6.68□□□□□ -1.34
SRP54-212ENST00000556992 IFT140Q96RY7 1462 aa6.67□□□□□ -1.34
SRP54-212ENST00000556992 PTCD1O75127 700 aaKnown RBP6.67□□□□□ -1.34
SRP54-212ENST00000556992 CYP2E1P05181 493 aaPredicted RBP6.67□□□□□ -1.34
SRP54-212ENST00000556992 SH2B1Q9NRF2 756 aaPredicted RBP6.67□□□□□ -1.34
SRP54-212ENST00000556992 ZNF777Q9ULD5 760 aaPredicted RBP6.67□□□□□ -1.34
SRP54-212ENST00000556992 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.67□□□□□ -1.34
SRP54-212ENST00000556992 TTBK1Q5TCY1 1321 aaPredicted RBP6.67□□□□□ -1.34
SRP54-212ENST00000556992 KIF21AQ7Z4S6 1674 aa6.67□□□□□ -1.34
SRP54-212ENST00000556992 HMX2A2RU54 273 aa6.66□□□□□ -1.34
SRP54-212ENST00000556992 TNFRSF10BO14763 440 aa6.66□□□□□ -1.34
SRP54-212ENST00000556992 TM4SF5O14894 197 aa6.66□□□□□ -1.34
SRP54-212ENST00000556992 HOXD8P13378 290 aaPredicted RBP6.66□□□□□ -1.34
SRP54-212ENST00000556992 CD68P34810 354 aaPredicted RBP6.66□□□□□ -1.34
SRP54-212ENST00000556992 OCLNQ16625 522 aa6.66□□□□□ -1.34
SRP54-212ENST00000556992 OR13H1Q8NG92 308 aa6.66□□□□□ -1.34
SRP54-212ENST00000556992 UBASH3BQ8TF42 649 aa6.66□□□□□ -1.34
SRP54-212ENST00000556992 STK32AQ8WU08 396 aa6.66□□□□□ -1.34
SRP54-212ENST00000556992 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.66□□□□□ -1.34
SRP54-212ENST00000556992 ZMIZ1Q9ULJ6 1067 aa6.66□□□□□ -1.34
SRP54-212ENST00000556992 COL17A1Q9UMD9 1497 aaPredicted RBP6.66□□□□□ -1.34
SRP54-212ENST00000556992 ADAM11O75078 769 aa6.65□□□□□ -1.34
SRP54-212ENST00000556992 EPHA1P21709 976 aa6.65□□□□□ -1.34
SRP54-212ENST00000556992 IRAK1P51617 712 aa6.65□□□□□ -1.34
SRP54-212ENST00000556992 GP2P55259 537 aaKnown RBP6.65□□□□□ -1.34
SRP54-212ENST00000556992 C16orf46Q6P387 395 aa6.65□□□□□ -1.34
SRP54-212ENST00000556992 ZDHHC13Q8IUH4 622 aa6.65□□□□□ -1.34
SRP54-212ENST00000556992 TRIM42Q8IWZ5 723 aa6.65□□□□□ -1.34
SRP54-212ENST00000556992 GPR152Q8TDT2 470 aa6.65□□□□□ -1.34
SRP54-212ENST00000556992 FOXD4L4Q8WXT5 416 aaPredicted RBP6.65□□□□□ -1.34
SRP54-212ENST00000556992 UTP4Q969X6 686 aaKnown RBP6.65□□□□□ -1.34
SRP54-212ENST00000556992 C7orf69Q9H7B7 122 aa6.65□□□□□ -1.34
SRP54-212ENST00000556992 SRA1Q9HD15 236 aaKnown RBP6.65□□□□□ -1.34
SRP54-212ENST00000556992 FHAD1B1AJZ9 1412 aa6.65□□□□□ -1.35
SRP54-212ENST00000556992 AQRO60306 1485 aaKnown RBP eCLIP6.65□□□□□ -1.35
SRP54-212ENST00000556992 ARAP1Q96P48 1450 aa6.65□□□□□ -1.35
SRP54-212ENST00000556992 BTBD11A6QL63 1104 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 ZBTB39O15060 712 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 DHX15O43143 795 aaKnown RBP6.64□□□□□ -1.35
SRP54-212ENST00000556992 COBLO75128 1261 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 ACPPP15309 386 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 TAL1P17542 331 aaPredicted RBP6.64□□□□□ -1.35
SRP54-212ENST00000556992 BRD2P25440 801 aaKnown RBP6.64□□□□□ -1.35
SRP54-212ENST00000556992 CDC27P30260 824 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 SCNN1AP37088 669 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 KIAA1211Q6ZU35 1233 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 MAP4K3Q8IVH8 894 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 COL26A1Q96A83 441 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 GRIN2BQ13224 1484 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 ARHGAP35Q9NRY4 1499 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 PRDM2Q13029 1718 aa6.64□□□□□ -1.35
SRP54-212ENST00000556992 ZAP70P43403 619 aa6.63□□□□□ -1.35
SRP54-212ENST00000556992 NFIAQ12857 509 aa6.63□□□□□ -1.35
SRP54-212ENST00000556992 HYAL2Q12891 473 aa6.63□□□□□ -1.35
SRP54-212ENST00000556992 CCER1Q8TC90 406 aaPredicted RBP6.63□□□□□ -1.35
SRP54-212ENST00000556992 KANSL3Q9P2N6 904 aa6.63□□□□□ -1.35
SRP54-212ENST00000556992 ACIN1Q9UKV3 1341 aaKnown RBP6.62□□□□□ -1.35
SRP54-212ENST00000556992 KIAA1324LA8MWY0 1029 aaPredicted RBP6.62□□□□□ -1.35
SRP54-212ENST00000556992 FSCN2O14926 492 aa6.62□□□□□ -1.35
SRP54-212ENST00000556992 PAX4O43316 350 aa6.62□□□□□ -1.35
SRP54-212ENST00000556992 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.353e-23■■■■□ 22.6
SRP54-212ENST00000556992 FAM69CQ0P6D2 419 aa6.62□□□□□ -1.35
SRP54-212ENST00000556992 DUOXA2Q1HG44 320 aa6.62□□□□□ -1.35
SRP54-212ENST00000556992 TTC39BQ5VTQ0 682 aaPredicted RBP6.62□□□□□ -1.35
SRP54-212ENST00000556992 PIK3R5Q8WYR1 880 aa6.62□□□□□ -1.35
SRP54-212ENST00000556992 KLHDC7BQ96G42 594 aa6.62□□□□□ -1.35
SRP54-212ENST00000556992 SPACA7Q96KW9 195 aa6.62□□□□□ -1.35
SRP54-212ENST00000556992 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
SRP54-212ENST00000556992 PRR19A6NJB7 356 aa6.61□□□□□ -1.35
SRP54-212ENST00000556992 TRPA1O75762 1119 aa6.61□□□□□ -1.35
SRP54-212ENST00000556992 FAM46AQ96IP4 442 aaKnown RBP6.61□□□□□ -1.35
SRP54-212ENST00000556992 CEP41Q9BYV8 373 aa6.61□□□□□ -1.35
SRP54-212ENST00000556992 MUC3BQ9H195 1237 aa6.61□□□□□ -1.35
SRP54-212ENST00000556992 TMEM63CQ9P1W3 806 aa6.61□□□□□ -1.35
SRP54-212ENST00000556992 FMN1Q68DA7 1419 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 GSC2O15499 205 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms