RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Ccdc160Q3UYG1 323 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Eps15l1Q60902 907 aaKnown RBP8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Nutm1Q8BHP2 1126 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Anapc5Q8BTZ4 740 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 PpanQ91YU8 470 aaKnown RBP8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Tacc2Q9JJG0 1149 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Rps6ka2Q9WUT3 733 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mrc2Q64449 1479 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ppp1r9aH3BJD6 1292 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ncf2O70145 525 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Fkbp4P30416 458 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Slc12a2P55012 1205 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cdr2P97817 455 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Pfdn6Q03958 127 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mybpc2Q5XKE0 1136 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Hyou1Q9JKR6 999 aaKnown RBP8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Carmil1Q6EDY6 1374 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Pdzd8B9EJ80 1147 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Fbln2P37889 1221 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Hspa8P63017 646 aaKnown RBP8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Slc8a1P70414 970 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Stoml1Q8CI66 399 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cog6Q8R3I3 657 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Exoc1Q8R3S6 894 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 HnrnpmQ9D0E1 729 aaKnown RBP8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cwc25Q9DBF7 416 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mmel1Q9JLI3 765 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Serpini1O35684 410 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ube2hP62257 183 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 AmfrQ9R049 643 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Atp6v0a1Q9Z1G4 839 aaKnown RBP8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ift81O35594 676 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 GnaqP21279 359 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 GabpaQ00422 454 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Srek1ip1Q4V9W2 153 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Tmtc4Q8BG19 741 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Bag2Q91YN9 210 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Calml3Q9D6P8 149 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Golga5Q9QYE6 729 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Wdr46Q9Z0H1 622 aaKnown RBP8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Atp2b1G5E829 1220 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Zc3h18Q0P678 948 aaKnown RBP8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ice2Q3UZ18 988 aaKnown RBP8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Palm2Q8BR92 376 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Lin9Q8C735 542 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Klhdc4Q921I2 584 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Hs6st3Q9QYK4 470 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Copg1Q9QZE5 874 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Kif6E9PX57 802 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 P2rx5Q3UYI1 455 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mrps26Q80ZS3 200 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gm28961A0A087WPA5 222 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gm21858A0A087WQ24 222 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Rpl13P47963 211 aaKnown RBP8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Usp8Q80U87 1080 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Klhl30Q8C3F7 581 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mrpl44Q9CY73 333 aaKnown RBP8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gm21083A0A0G2JFD5 256 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Speer2E9Q9U2 264 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ppme1Q8BVQ5 386 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Nlrp3Q8R4B8 1033 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 ZgpatQ8VDM1 511 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Myo1bP46735 1107 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Wwc1Q5SXA9 1104 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Map3k11Q80XI6 850 aa8.6□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Iqcj-Schip1A0A088MLT8 559 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Schip1P0DPB4 484 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Tnnc2P20801 160 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Eef2P58252 858 aaKnown RBP8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Lrch1P62046 709 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Sox13Q04891 613 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Leo1Q5XJE5 667 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 AmotQ8VHG2 1126 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Atp6v0a4Q920R6 833 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Irx4Q9QY61 515 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 AknaQ80VW7 1404 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ccdc153P0C7Q1 202 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cct6aP80317 531 aaKnown RBP8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Arhgef9Q3UTH8 516 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mtrf1lQ8BJU9 373 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Vps37bQ8R0J7 285 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Trim42Q9D2H5 723 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Zranb2Q9R020 330 aaKnown RBP8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ift20Q61025 132 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 CarsQ9ER72 831 aaKnown RBP8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Diaph3Q9Z207 1171 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Sdccag3A2AIW0 432 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Tbc1d8bA3KGB4 1114 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Stk10O55098 966 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Zfyve27Q3TXX3 415 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Serpinb6Q60854 378 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Fgd5Q80UZ0 1219 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ccdc65Q8VHI7 493 aa8.59□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Wdr62Q3U3T8 1523 aa8.59□□□□□ -1.04
Pcdh9-204ENSMUST00000193901 Cetn3O35648 167 aa8.58□□□□□ -1.04
Pcdh9-204ENSMUST00000193901 Kmt5bQ3U8K7 883 aa8.58□□□□□ -1.04
Pcdh9-204ENSMUST00000193901 Zfp397Q7TNK4 527 aa8.58□□□□□ -1.04
Pcdh9-204ENSMUST00000193901 Stag1Q9D3E6 1258 aa8.58□□□□□ -1.04
Pcdh9-204ENSMUST00000193901 Atp8b3Q6UQ17 1335 aa8.58□□□□□ -1.04
Pcdh9-204ENSMUST00000193901 Zfpm1O35615 995 aa8.58□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms