RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Prdm1Q60636 856 aa12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Rbm5Q91YE7 815 aaKnown RBP12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Clstn1Q9EPL2 979 aa12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Foxo3Q9WVH4 672 aa12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 RubcnlQ3TD16 648 aa12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Mctp2Q5RJH2 878 aa12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Ifit1Q64282 463 aa12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Kiaa0319lQ8K135 1048 aa12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Appbp2Q9DAX9 585 aa12.74□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Celf1P28659 486 aaKnown RBP12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Gm21985Q6P6P5 1106 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Eef2kO08796 724 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 PnnO35691 725 aaKnown RBP12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Stat1P42225 749 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Plekhf1Q3TB82 279 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Kiaa0753Q6A000 959 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Shisa4Q8CA71 197 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Lgr5Q9Z1P4 907 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Lrp6O88572 1613 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Prl3d1P18121 224 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Cnnm3Q32NY4 713 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Lrrc43Q3V0L5 667 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Nxf7Q80SZ6 620 aaKnown RBP12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Usp42B2RQC2 1324 aaKnown RBP12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Cntnap1O54991 1385 aa12.73□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Krt24A1L317 512 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Myl10Q62082 202 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 SowahdQ8BY98 327 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 RtcbQ99LF4 505 aaKnown RBP12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Kcnq5Q9JK45 933 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Gm29094F6Q785 221 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Sept9Q80UG5 583 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Samm50Q8BGH2 469 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Cnot6lQ8VEG6 555 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Riok1Q922Q2 567 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 MthfsQ9D110 203 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Mroh6V9GX81 722 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Gm4340L7N2C4 268 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 CrcpO35427 148 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 ZwintQ9CQU5 252 aa12.72□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Cacna1sQ02789 1880 aa12.71□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Dnajc2P54103 621 aaKnown RBP12.71□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Ell2Q3UKU1 639 aa12.71□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 TrhQ62361 256 aa12.71□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Ankrd13dQ6PD24 605 aa12.71□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Zbtb21E9Q444 1094 aa12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Pcdhb9E9Q5G2 828 aa12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Abl1P00520 1123 aa12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ppp1r10Q80W00 888 aaKnown RBP12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ccar2Q8VDP4 922 aaKnown RBP12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 SnrkQ8VDU5 748 aa12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Zcrb1Q9CZ96 217 aaKnown RBP12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 ParvgQ9ERD8 331 aa12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ric1Q69ZJ7 1422 aa12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Setdb1O88974 1307 aa12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Arhgap33Q80YF9 1305 aa12.71□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 GabrdP22933 449 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ces1dQ8VCT4 565 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ppp4r3bQ922R5 820 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Bloc1s2Q9CWG9 143 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Mapkapk5O54992 473 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 ImpactO55091 318 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Fam83bQ0VBM2 1012 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Agtpbp1Q641K1 1218 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ube3bQ9ES34 1070 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Tbc1d8Q9Z1A9 1134 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 1700006A11RikB9EHI3 544 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Cd22P35329 862 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Arid3aQ62431 601 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Cep57l1Q8VDS7 400 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 NaspQ99MD9 773 aaKnown RBP12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Akt1s1Q9D1F4 257 aa12.7□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Gm7347D3YYI9 267 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Speer4aF8VPX6 267 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ubash3aQ3V3E1 624 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ube3cQ80U95 1083 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 4931400O07RikQ9D4M5 137 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Osbpl5Q9ER64 874 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Irs4Q9Z0Y7 1216 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Sipa1l3G3X9J0 1776 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Pet2A2AHY8 747 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Tnni2P13412 182 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 SfswapQ3USH5 945 aaKnown RBP12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 HlfQ8BW74 295 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Fsd2Q8BZ52 692 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ppil4Q9CXG3 492 aaKnown RBP12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 CrebrfQ8CDG5 640 aaKnown RBP12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 CerkQ8K4Q7 531 aa12.69□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Vmn2r23E9PXI5 849 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ipo4Q8VI75 1082 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Chrna2Q91X60 512 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Pold4Q9CWP8 107 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Naa16Q9DBB4 864 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Efcc1Q9JJF6 558 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Mcm3P25206 812 aaKnown RBP12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Kif4P33174 1231 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Msl1Q6PDM1 616 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ano1Q8BHY3 960 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Cep55Q8BT07 462 aa12.68□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Gripap1Q8VD04 806 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms