RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Tpm4Q6IRU2 248 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ankrd23Q812A3 306 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Telo2Q9DC40 840 aaKnown RBP14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 PhaxQ9JJT9 385 aaKnown RBP14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 EcsitQ9QZH6 435 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Pde3aQ9Z0X4 1141 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Abcc12Q80WJ6 1366 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Limch1Q3UH68 1057 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Dusp10Q9ESS0 483 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Calcoco2A2A6M5 331 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Arhgap4B1AUY3 965 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Plekhd1B2RPU2 505 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Hoxc9P09633 260 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Vps33bP59016 617 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Cers3Q1A3B0 383 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Pcdhb15Q91Y04 786 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ccdc96Q9CR92 584 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Aox2Q5SGK3 1345 aa14.05□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Zap70P43404 618 aa14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 HellsQ60848 821 aa14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Abcf1Q6P542 837 aaKnown RBP14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Gpatch3Q8BIY1 525 aa14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Etf1Q8BWY3 437 aaKnown RBP14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Kiaa1524Q8BWY9 907 aa14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 OscarQ8VBT3 265 aa14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 StrbpQ91WM1 672 aaKnown RBP14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Zbtb3Q91X45 518 aa14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Col4a3bpQ9EQG9 624 aa14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Bag3Q9JLV1 577 aaKnown RBP14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 ChmQ9QXG2 665 aa14.04□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Eif4a1P60843 406 aaKnown RBP14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ddb1Q3U1J4 1140 aaKnown RBP14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Gsdma3Q5Y4Y6 464 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Tgfb1i1Q62219 461 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Pnpla2Q8BJ56 486 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 BbxQ8VBW5 907 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Trim59Q922Y2 403 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ankrd1Q9CR42 319 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Naa16Q9DBB4 864 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Slit1Q80TR4 1531 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Nwd2Q6P5U7 1742 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Map9Q3TRR0 646 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Zranb3Q6NZP1 1069 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Cnpy2Q9QXT0 182 aa14.03□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ric1Q69ZJ7 1422 aa14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Atp2b1G5E829 1220 aa14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 MecomP14404 1042 aa14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 XpcP51612 930 aa14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Larp1Q6ZQ58 1072 aaKnown RBP14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Dnm3Q8BZ98 863 aa14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Golph3lQ8R088 285 aaKnown RBP14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Mrpl44Q9CY73 333 aaKnown RBP14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Golga5Q9QYE6 729 aa14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 GakQ99KY4 1305 aa14.02□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Chrm1P12657 460 aa14.02□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Tada3Q8R0L9 432 aa14.02□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Ginm1Q91WR6 327 aa14.02□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Xpo4Q9ESJ0 1151 aa14.02□□□□□ -0.17
Ufd1-201ENSMUST00000005394 AceP09470 1312 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 AW822073A0A0N4SUK1 652 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Cfdp1O88271 295 aaKnown RBP14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Myo1aO88329 1043 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Samsn1P57725 372 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Znf532Q6NXK2 1036 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 CrebrfQ8CDG5 640 aaKnown RBP14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Frat2Q8K025 231 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 TkfcQ8VC30 578 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Fam76aQ922G2 307 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Rbm33Q9CXK9 1231 aaKnown RBP14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Zcrb1Q9CZ96 217 aaKnown RBP14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Flt4P35917 1363 aa14.01□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Mdm2P23804 489 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Ric8aQ3TIR3 530 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Ccdc102aQ3TMW1 549 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Sik1Q60670 779 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Adck5Q80V03 582 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 LarsQ8BMJ2 1178 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Nek11Q8C0Q4 628 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Amotl1Q9D4H4 968 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Rai14Q9EP71 979 aaKnown RBP14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Myo1bP46735 1107 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Plcb3P51432 1234 aaKnown RBP14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Exoc5Q3TPX4 708 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 L1td1Q587J6 782 aaKnown RBP14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Tceanc2Q8R2M0 207 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Iffo2Q8R2V2 512 aa14□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Col15a1O35206 1367 aa13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Myo3bQ1EG27 1305 aa13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Wdr19Q3UGF1 1341 aa13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Lcmt1A0A0U1RNF2 332 aa13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Rtel1Q0VGM9 1203 aa13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Usp44Q8C2S0 711 aa13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Lrit1Q8K099 624 aa13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Tmem119Q8R138 280 aa13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Nop2Q922K7 793 aaKnown RBP13.99□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Col1a2Q01149 1372 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Mst1rQ62190 1378 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 GalcP54818 684 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Itga6Q61739 1091 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 BrapQ99MP8 591 aa13.98□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms