RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PYCARD-AS1I3L0S3 204 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 J3QW42 95 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 P2RY10O00398 339 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 CASKO14936 926 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 RAF1P04049 648 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 CALRP27797 417 aaKnown RBP13.4□□□□□ -0.26
VAMP1-207ENST00000539047 UGT2B10P36537 528 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 SOX2P48431 317 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 KRTAP27-1Q3LI81 207 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 FAM169BQ8N8A8 192 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 OR13C5Q8NGS8 318 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 NDNFQ8TB73 568 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 OR51E1Q8TCB6 317 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 RNF166Q96A37 237 aaPredicted RBP13.4□□□□□ -0.26
VAMP1-207ENST00000539047 CCDC120Q96HB5 630 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 DCUN1D5Q9BTE7 237 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 OPA3Q9H6K4 179 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 TCF7L1Q9HCS4 588 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 PRRC2CQ9Y520 2896 aaKnown RBP13.4□□□□□ -0.26
VAMP1-207ENST00000539047 TRBV5-5A0A0J9YX44 114 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 PDCD5O14737 125 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 LRRTM2O43300 516 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 ATE1O95260 518 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 IL1AP01583 271 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 ZNF14P17017 642 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-207ENST00000539047 GNLYP22749 145 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 MTNR1BP49286 362 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 SPCS2Q15005 226 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 DGUOKQ16854 277 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 C3orf36Q3SXR2 165 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 TPRA1Q86W33 373 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 LIX1LQ8IVB5 337 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 WDR31Q8NA23 367 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 RGP1Q92546 391 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-207ENST00000539047 TMEM106AQ96A25 262 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 FAM71F1Q96KD3 344 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-207ENST00000539047 POM121L2Q96KW2 1035 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 DERL3Q96Q80 235 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 NGBQ9NPG2 151 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 GPR84Q9NQS5 396 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 SLC25A15Q9Y619 301 aa13.39□□□□□ -0.27
VAMP1-207ENST00000539047 A0A1W2PPW3 197 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 SC5DO75845 299 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 IGKV3-15P01624 115 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 UCHL1P09936 223 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 GNALP38405 381 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 RPS11P62280 158 aaKnown RBP eCLIP13.38□□□□□ -0.27
VAMP1-207ENST00000539047 PPP3R1P63098 170 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 FAM27E3Q08E93 113 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 TMEM91Q6ZNR0 172 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 MRPL21Q7Z2W9 205 aaKnown RBP13.38□□□□□ -0.27
VAMP1-207ENST00000539047 CROCCP3Q8IVE0 287 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 RDH10Q8IZV5 341 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 ITFG2Q969R8 447 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 REEP6Q96HR9 211 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 MED18Q9BUE0 208 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 C1QTNF5Q9BXJ0 243 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 NOX4Q9NPH5 578 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 KCNJ16Q9NPI9 418 aa13.38□□□□□ -0.27
VAMP1-207ENST00000539047 CCDC59Q9P031 241 aaKnown RBP13.38□□□□□ -0.27
VAMP1-207ENST00000539047 LOC100509620A0A075B734 347 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 TRAV1-2A0A0B4J238 106 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 H3BSH0 61 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 J3QKU1 62 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 DHRS3O75911 302 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 AGFG2O95081 481 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 CDRT1O95170 752 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 OCMP0CE72 109 aaPredicted RBP13.37□□□□□ -0.27
VAMP1-207ENST00000539047 CCL1P22362 96 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 ADORA2A-AS1P86434 159 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 FBXL19-AS1Q494R0 122 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 ALKBH2Q6NS38 261 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 UNQ9370/PRO34162Q6UXP9 181 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 PRSS45Q7RTY3 260 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 ZNF584Q8IVC4 421 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 C1orf174Q8IYL3 243 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 LILRB4Q8NHJ6 448 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 RNASE6Q93091 150 aaKnown RBP13.37□□□□□ -0.27
VAMP1-207ENST00000539047 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 TRMT61AQ96FX7 289 aaKnown RBP13.37□□□□□ -0.27
VAMP1-207ENST00000539047 MS4A3Q96HJ5 214 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 NEK6Q9HC98 313 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 SNTG1Q9NSN8 517 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 TBCCD1Q9NVR7 557 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 CRNNQ9UBG3 495 aaPredicted RBP13.37□□□□□ -0.27
VAMP1-207ENST00000539047 SPEF1Q9Y4P9 236 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 MYO18BQ8IUG5 2567 aa13.37□□□□□ -0.27
VAMP1-207ENST00000539047 LOC390937A0A1W2PQ73 354 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 DHRS7CA6NNS2 312 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 M0R1B8 84 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 CCL2P13500 99 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 FSTP19883 344 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 SDC2P34741 201 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 MAP2K3P46734 347 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 UQCRFS1P47985 274 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 RORCP51449 518 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 ZNF83P51522 516 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 MXD1Q05195 221 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 INSL4Q14641 139 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 TAB1Q15750 504 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms