RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A SAH1P39954 449 aaKnown RBP8.77□□□□□ -1.01
TGA1tA(UGC)A IWR1Q07532 353 aaPredicted RBP8.77□□□□□ -1.01
TGA1tA(UGC)A SPE3Q12074 293 aaKnown RBP8.77□□□□□ -1.01
TGA1tA(UGC)A MRC1P25588 1096 aa8.76□□□□□ -1.01
TGA1tA(UGC)A RPN12P32496 274 aa8.76□□□□□ -1.01
TGA1tA(UGC)A MNR2P35724 969 aa8.76□□□□□ -1.01
TGA1tA(UGC)A ADE17P38009 592 aaKnown RBP8.76□□□□□ -1.01
TGA1tA(UGC)A RRM3P38766 723 aa8.76□□□□□ -1.01
TGA1tA(UGC)A RSM25P40496 264 aa8.76□□□□□ -1.01
TGA1tA(UGC)A CPR7P47103 393 aa8.76□□□□□ -1.01
TGA1tA(UGC)A GFD1Q04839 188 aaKnown RBP8.76□□□□□ -1.01
TGA1tA(UGC)A ABP140Q08641 628 aaKnown RBP8.76□□□□□ -1.01
TGA1tA(UGC)A LEA1Q08963 238 aaPredicted RBP8.76□□□□□ -1.01
TGA1tA(UGC)A MAS1P10507 462 aa8.75□□□□□ -1.01
TGA1tA(UGC)A HMG2P12684 1045 aa8.75□□□□□ -1.01
TGA1tA(UGC)A RRT12P25381 491 aa8.75□□□□□ -1.01
TGA1tA(UGC)A PPZ1P26570 692 aa8.75□□□□□ -1.01
TGA1tA(UGC)A ISF1P32488 338 aa8.75□□□□□ -1.01
TGA1tA(UGC)A KDX1P36005 433 aa8.75□□□□□ -1.01
TGA1tA(UGC)A PCM1P38628 557 aaKnown RBP8.75□□□□□ -1.01
TGA1tA(UGC)A CTM1P38818 585 aa8.75□□□□□ -1.01
TGA1tA(UGC)A TAF1P46677 1066 aa8.75□□□□□ -1.01
TGA1tA(UGC)A SMC3P47037 1230 aa8.75□□□□□ -1.01
TGA1tA(UGC)A ALT1P52893 592 aa8.75□□□□□ -1.01
TGA1tA(UGC)A TBF1Q02457 562 aa8.75□□□□□ -1.01
TGA1tA(UGC)A PML39Q03760 334 aa8.75□□□□□ -1.01
TGA1tA(UGC)A RGA2Q06407 1009 aa8.75□□□□□ -1.01
TGA1tA(UGC)A CSR1Q06705 408 aaKnown RBP8.75□□□□□ -1.01
TGA1tA(UGC)A TMA16Q08687 178 aa8.75□□□□□ -1.01
TGA1tA(UGC)A RRD2Q12461 358 aa8.75□□□□□ -1.01
TGA1tA(UGC)A GAL10P04397 699 aa8.74□□□□□ -1.01
TGA1tA(UGC)A ATE1P16639 503 aa8.74□□□□□ -1.01
TGA1tA(UGC)A RNR1P21524 888 aaKnown RBP8.74□□□□□ -1.01
TGA1tA(UGC)A SAT4P25333 603 aaKnown RBP8.74□□□□□ -1.01
TGA1tA(UGC)A APL1P27351 700 aa8.74□□□□□ -1.01
TGA1tA(UGC)A TBS1P38114 1094 aa8.74□□□□□ -1.01
TGA1tA(UGC)A KAP123P40069 1113 aaKnown RBP8.74□□□□□ -1.01
TGA1tA(UGC)A DSE1P40077 573 aa8.74□□□□□ -1.01
TGA1tA(UGC)A LSB6P42951 607 aa8.74□□□□□ -1.01
TGA1tA(UGC)A YNL011CP53980 444 aa8.74□□□□□ -1.01
TGA1tA(UGC)A YLR297WQ05899 129 aa8.74□□□□□ -1.01
TGA1tA(UGC)A ECM3Q99252 613 aa8.74□□□□□ -1.01
TGA1tA(UGC)A GAC1P28006 793 aa8.73□□□□□ -1.01
TGA1tA(UGC)A KIP1P28742 1111 aa8.73□□□□□ -1.01
TGA1tA(UGC)A MET4P32389 672 aa8.73□□□□□ -1.01
TGA1tA(UGC)A YKL097CP34245 136 aa8.73□□□□□ -1.01
TGA1tA(UGC)A RPC25P35718 212 aa8.73□□□□□ -1.01
TGA1tA(UGC)A YET1P35723 206 aa8.73□□□□□ -1.01
TGA1tA(UGC)A YKL023WP36103 277 aaKnown RBP8.73□□□□□ -1.01
TGA1tA(UGC)A SDS3P40505 327 aa8.73□□□□□ -1.01
TGA1tA(UGC)A COS5P47187 383 aa8.73□□□□□ -1.01
TGA1tA(UGC)A UBP3Q01477 912 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
TGA1tA(UGC)A GIR2Q03768 265 aaPredicted RBP8.73□□□□□ -1.01
TGA1tA(UGC)A AI5_BETAQ9ZZX0 354 aa8.73□□□□□ -1.01
TGA1tA(UGC)A CDC37P06101 506 aaKnown RBP8.72□□□□□ -1.01
TGA1tA(UGC)A KGD2P19262 463 aaPredicted RBP8.72□□□□□ -1.01
TGA1tA(UGC)A IMG2P25642 146 aaPredicted RBP8.72□□□□□ -1.01
TGA1tA(UGC)A FRE1P32791 686 aa8.72□□□□□ -1.01
TGA1tA(UGC)A SHM1P37292 490 aaPredicted RBP8.72□□□□□ -1.01
TGA1tA(UGC)A KIC1P38692 1080 aa8.72□□□□□ -1.01
TGA1tA(UGC)A YJR054WP47114 497 aa8.72□□□□□ -1.01
TGA1tA(UGC)A VPS70P47161 811 aa8.72□□□□□ -1.01
TGA1tA(UGC)A GPM2Q12008 311 aa8.72□□□□□ -1.01
TGA1tA(UGC)A HRT3Q12347 344 aa8.72□□□□□ -1.01
TGA1tA(UGC)A TOR1P35169 2470 aa8.72□□□□□ -1.01
TGA1tA(UGC)A IRA2P19158 3079 aa8.72□□□□□ -1.01
TGA1tA(UGC)A BET2P20133 325 aa8.71□□□□□ -1.02
TGA1tA(UGC)A TKL2P33315 681 aa8.71□□□□□ -1.02
TGA1tA(UGC)A YKR051WP36142 418 aa8.71□□□□□ -1.02
TGA1tA(UGC)A MIP6P38760 659 aaKnown RBP8.71□□□□□ -1.02
TGA1tA(UGC)A SFB3P38810 929 aa8.71□□□□□ -1.02
TGA1tA(UGC)A SSL2Q00578 843 aa8.71□□□□□ -1.02
TGA1tA(UGC)A LEE1Q02799 301 aaKnown RBP8.71□□□□□ -1.02
TGA1tA(UGC)A HER2Q03557 464 aa8.71□□□□□ -1.02
TGA1tA(UGC)A HCR1Q05775 265 aaKnown RBP8.71□□□□□ -1.02
TGA1tA(UGC)A SPO75Q07798 868 aa8.71□□□□□ -1.02
TGA1tA(UGC)A FMP25Q08023 583 aa8.71□□□□□ -1.02
TGA1tA(UGC)A IRC10Q08118 586 aa8.71□□□□□ -1.02
TGA1tA(UGC)A CWC2Q12046 339 aaPredicted RBP8.71□□□□□ -1.02
TGA1tA(UGC)A PDE1P22434 369 aa8.7□□□□□ -1.02
TGA1tA(UGC)A VBA3P25594 458 aa8.7□□□□□ -1.02
TGA1tA(UGC)A VBA5P36172 582 aa8.7□□□□□ -1.02
TGA1tA(UGC)A YBR056WP38081 501 aa8.7□□□□□ -1.02
TGA1tA(UGC)A SHE3P38272 425 aaKnown RBP8.7□□□□□ -1.02
TGA1tA(UGC)A TGL3P40308 642 aa8.7□□□□□ -1.02
TGA1tA(UGC)A HFM1P51979 1187 aa8.7□□□□□ -1.02
TGA1tA(UGC)A PUS2P53167 370 aa8.7□□□□□ -1.02
TGA1tA(UGC)A ESBP6P53918 673 aa8.7□□□□□ -1.02
TGA1tA(UGC)A MUB1Q03162 620 aa8.7□□□□□ -1.02
TGA1tA(UGC)A MZM1Q03429 123 aaPredicted RBP8.7□□□□□ -1.02
TGA1tA(UGC)A STE20Q03497 939 aaKnown RBP8.7□□□□□ -1.02
TGA1tA(UGC)A WAR1Q03631 944 aa8.7□□□□□ -1.02
TGA1tA(UGC)A TEL1P38110 2787 aa8.7□□□□□ -1.02
TGA1tA(UGC)A RAD16P31244 790 aa8.69□□□□□ -1.02
TGA1tA(UGC)A CSG2P35206 410 aa8.69□□□□□ -1.02
TGA1tA(UGC)A PXL1P36166 706 aa8.69□□□□□ -1.02
TGA1tA(UGC)A CDC27P38042 758 aa8.69□□□□□ -1.02
TGA1tA(UGC)A RAD55P38953 406 aa8.69□□□□□ -1.02
TGA1tA(UGC)A FHL1P39521 936 aa8.69□□□□□ -1.02
TGA1tA(UGC)A SBE2P42223 864 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms