RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 HXT16P47185 567 aa0.58□□□□□ -2.32
snR50snR50 CCM1P48237 864 aaPredicted RBP0.58□□□□□ -2.32
snR50snR50 ASN1P49089 572 aaKnown RBP0.58□□□□□ -2.32
snR50snR50 EEB1Q02891 456 aa0.58□□□□□ -2.32
snR50snR50 VPS16Q03308 798 aa0.58□□□□□ -2.32
snR50snR50 SPO20Q04359 397 aa0.58□□□□□ -2.32
snR50snR50 ARG7Q04728 441 aa0.58□□□□□ -2.32
snR50snR50 GAD1Q04792 585 aa0.58□□□□□ -2.32
snR50snR50 DUS3Q06053 668 aaKnown RBP0.58□□□□□ -2.32
snR50snR50 GRS2Q06817 618 aa0.58□□□□□ -2.32
snR50snR50 BSC6Q08280 497 aa0.58□□□□□ -2.32
snR50snR50 MSC6Q08818 692 aaKnown RBP0.58□□□□□ -2.32
snR50snR50 FRE7Q12333 620 aa0.58□□□□□ -2.32
snR50snR50 GPR1Q12361 961 aa0.58□□□□□ -2.32
snR50snR50 RQC2Q12532 1038 aaKnown RBP0.58□□□□□ -2.32
snR50snR50 AI5_ALPHAQ9ZZX1 630 aa0.58□□□□□ -2.32
snR50snR50 ADE8P04161 214 aa0.57□□□□□ -2.32
snR50snR50 TPK2P06245 380 aa0.57□□□□□ -2.32
snR50snR50 STE12P13574 688 aa0.57□□□□□ -2.32
snR50snR50 ABF1P14164 731 aa0.57□□□□□ -2.32
snR50snR50 ATO2P32907 282 aa0.57□□□□□ -2.32
snR50snR50 AFR1P33304 620 aa0.57□□□□□ -2.32
snR50snR50 DUT1P33317 147 aa0.57□□□□□ -2.32
snR50snR50 MOT2P34909 587 aaKnown RBP0.57□□□□□ -2.32
snR50snR50 EXO84P38261 753 aa0.57□□□□□ -2.32
snR50snR50 APD1P38281 316 aa0.57□□□□□ -2.32
snR50snR50 FMO1P38866 432 aa0.57□□□□□ -2.32
snR50snR50 MET10P39692 1035 aa0.57□□□□□ -2.32
snR50snR50 IRR1P40541 1150 aa0.57□□□□□ -2.32
snR50snR50 ATG36P46983 293 aa0.57□□□□□ -2.32
snR50snR50 PIP2P52960 996 aa0.57□□□□□ -2.32
snR50snR50 YGL260WP53056 76 aa0.57□□□□□ -2.32
snR50snR50 IDP3P53982 420 aaKnown RBP0.57□□□□□ -2.32
snR50snR50 RSC9Q03124 581 aa0.57□□□□□ -2.32
snR50snR50 FCP1Q03254 732 aa0.57□□□□□ -2.32
snR50snR50 CTK1Q03957 528 aaKnown RBP0.57□□□□□ -2.32
snR50snR50 YPT1P01123 206 aaKnown RBP0.56□□□□□ -2.32
snR50snR50 YER190C-BP0CX94 160 aa0.56□□□□□ -2.32
snR50snR50 YEL077W-AP0CX95 160 aa0.56□□□□□ -2.32
snR50snR50 YGR296C-BP0CX96 160 aa0.56□□□□□ -2.32
snR50snR50 YPL283W-BP0CX97 160 aa0.56□□□□□ -2.32
snR50snR50 YPR204C-AP0CX98 160 aa0.56□□□□□ -2.32
snR50snR50 MVD1P32377 396 aaKnown RBP0.56□□□□□ -2.32
snR50snR50 SET3P36124 751 aa0.56□□□□□ -2.32
snR50snR50 SAK1P38990 1142 aa0.56□□□□□ -2.32
snR50snR50 LYS9P38999 446 aa0.56□□□□□ -2.32
snR50snR50 STM1P39015 273 aaKnown RBP0.56□□□□□ -2.32
snR50snR50 RPS26AP39938 119 aaKnown RBP0.56□□□□□ -2.32
snR50snR50 RPS26BP39939 119 aaKnown RBP0.56□□□□□ -2.32
snR50snR50 YIL169CP40442 995 aa0.56□□□□□ -2.32
snR50snR50 CEP3P40969 608 aa0.56□□□□□ -2.32
snR50snR50 SSY5P47002 699 aa0.56□□□□□ -2.32
snR50snR50 YGL117WP53133 265 aa0.56□□□□□ -2.32
snR50snR50 MTL1P53214 551 aa0.56□□□□□ -2.32
snR50snR50 ATP23P53722 227 aa0.56□□□□□ -2.32
snR50snR50 RMD1Q03441 430 aa0.56□□□□□ -2.32
snR50snR50 BUL2Q03758 920 aaKnown RBP0.56□□□□□ -2.32
snR50snR50 ESF1Q06344 628 aaKnown RBP0.56□□□□□ -2.32
snR50snR50 USV1Q12132 391 aa0.56□□□□□ -2.32
snR50snR50 CRC1Q12289 327 aa0.56□□□□□ -2.32
snR50snR50 HAT1Q12341 374 aa0.56□□□□□ -2.32
snR50snR50 WHI5Q12416 295 aa0.56□□□□□ -2.32
snR50snR50 ZRT2Q12436 422 aa0.56□□□□□ -2.32
snR50snR50 RPS9AO13516 197 aaKnown RBP0.55□□□□□ -2.32
snR50snR50 LEU2P04173 364 aaPredicted RBP0.55□□□□□ -2.32
snR50snR50 CDC34P14682 295 aa0.55□□□□□ -2.32
snR50snR50 PRP16P15938 1071 aaPredicted RBP0.55□□□□□ -2.32
snR50snR50 PRP28P23394 588 aa0.55□□□□□ -2.32
snR50snR50 AAD3P25612 363 aa0.55□□□□□ -2.32
snR50snR50 SBA1P28707 216 aaKnown RBP0.55□□□□□ -2.32
snR50snR50 PET112P33893 541 aa0.55□□□□□ -2.32
snR50snR50 TIF3P34167 436 aaKnown RBP0.55□□□□□ -2.32
snR50snR50 APL2P36000 726 aaPredicted RBP0.55□□□□□ -2.32
snR50snR50 TRZ1P36159 838 aaPredicted RBP0.55□□□□□ -2.32
snR50snR50 PCA1P38360 1216 aa0.55□□□□□ -2.32
snR50snR50 YMR124WP39523 943 aaKnown RBP0.55□□□□□ -2.32
snR50snR50 CFD1P40558 293 aa0.55□□□□□ -2.32
snR50snR50 AZF1P41696 914 aa0.55□□□□□ -2.32
snR50snR50 SHE10P53075 577 aa0.55□□□□□ -2.32
snR50snR50 YGR151CP53287 111 aa0.55□□□□□ -2.32
snR50snR50 SPC98P53540 846 aa0.55□□□□□ -2.32
snR50snR50 CPR8P53728 308 aa0.55□□□□□ -2.32
snR50snR50 NOG2P53742 486 aaKnown RBP0.55□□□□□ -2.32
snR50snR50 YMR317WQ04893 1140 aa0.55□□□□□ -2.32
snR50snR50 ENT2Q05785 613 aa0.55□□□□□ -2.32
snR50snR50 YLR225CQ05948 407 aaKnown RBP0.55□□□□□ -2.32
snR50snR50 MCM21Q06675 368 aa0.55□□□□□ -2.32
snR50snR50 THI21Q08975 551 aa0.55□□□□□ -2.32
snR50snR50 HAL9Q12180 1030 aa0.55□□□□□ -2.32
snR50snR50 PRS5Q12265 496 aaKnown RBP0.55□□□□□ -2.32
snR50snR50 PMA2P19657 947 aa0.54□□□□□ -2.32
snR50snR50 YCP4P25349 247 aaKnown RBP0.54□□□□□ -2.32
snR50snR50 AGP1P25376 633 aa0.54□□□□□ -2.32
snR50snR50 SEC20P28791 383 aa0.54□□□□□ -2.32
snR50snR50 CYS3P31373 394 aaKnown RBP0.54□□□□□ -2.32
snR50snR50 PPH3P32345 308 aa0.54□□□□□ -2.32
snR50snR50 FMP46P36141 133 aaKnown RBP0.54□□□□□ -2.32
snR50snR50 HSL7P38274 827 aa0.54□□□□□ -2.32
snR50snR50 CRP1P38845 465 aaKnown RBP0.54□□□□□ -2.32
snR50snR50 TPO2P53283 614 aa0.54□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms