RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W YJL163CP46996 555 aa1.34□□□□□ -2.19
SEC8YPR055W TEX1P53851 422 aaKnown RBP1.34□□□□□ -2.19
SEC8YPR055W DNM1P54861 757 aa1.34□□□□□ -2.19
SEC8YPR055W NHX1Q04121 633 aa1.34□□□□□ -2.19
SEC8YPR055W PPR1P07272 904 aaPredicted RBP1.34□□□□□ -2.2
SEC8YPR055W GSY1P23337 708 aa1.34□□□□□ -2.2
SEC8YPR055W PCL5P38794 229 aa1.34□□□□□ -2.2
SEC8YPR055W CAF16P43569 289 aa1.34□□□□□ -2.2
SEC8YPR055W ORC1P54784 914 aaPredicted RBP1.34□□□□□ -2.2
SEC8YPR055W SNP1Q00916 300 aaPredicted RBP1.34□□□□□ -2.2
SEC8YPR055W ATG33Q06485 197 aa1.34□□□□□ -2.2
SEC8YPR055W ECM3Q99252 613 aa1.34□□□□□ -2.2
SEC8YPR055W HOG1P32485 435 aa1.33□□□□□ -2.2
SEC8YPR055W CBR1P38626 284 aaKnown RBP1.33□□□□□ -2.2
SEC8YPR055W BCD1P38772 366 aa1.33□□□□□ -2.2
SEC8YPR055W SFB3P38810 929 aa1.33□□□□□ -2.2
SEC8YPR055W LYS9P38999 446 aa1.33□□□□□ -2.2
SEC8YPR055W MET13P53128 600 aa1.33□□□□□ -2.2
SEC8YPR055W GND2P53319 492 aa1.33□□□□□ -2.2
SEC8YPR055W RPL8AP17076 256 aaKnown RBP1.33□□□□□ -2.2
SEC8YPR055W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
SEC8YPR055W MVD1P32377 396 aaKnown RBP1.33□□□□□ -2.2
SEC8YPR055W KTR4P38131 464 aa1.33□□□□□ -2.2
SEC8YPR055W HOS4P40480 1083 aa1.33□□□□□ -2.2
SEC8YPR055W UBA2P52488 636 aa1.33□□□□□ -2.2
SEC8YPR055W YBP2P53169 641 aa1.33□□□□□ -2.2
SEC8YPR055W CTF4Q01454 927 aa1.33□□□□□ -2.2
SEC8YPR055W GSF2Q04697 403 aaKnown RBP1.33□□□□□ -2.2
SEC8YPR055W NGG1P32494 702 aa1.33□□□□□ -2.2
SEC8YPR055W PEX2P32800 271 aa1.33□□□□□ -2.2
SEC8YPR055W SPC42P36094 363 aa1.33□□□□□ -2.2
SEC8YPR055W HSL7P38274 827 aa1.33□□□□□ -2.2
SEC8YPR055W SIC1P38634 284 aa1.33□□□□□ -2.2
SEC8YPR055W FMO1P38866 432 aa1.33□□□□□ -2.2
SEC8YPR055W HRB1P38922 454 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
SEC8YPR055W GET2P40056 285 aa1.33□□□□□ -2.2
SEC8YPR055W OSW7P43611 510 aa1.33□□□□□ -2.2
SEC8YPR055W BNA2P47125 453 aa1.33□□□□□ -2.2
SEC8YPR055W SDA1P53313 767 aaKnown RBP1.33□□□□□ -2.2
SEC8YPR055W BRE5P53741 515 aaKnown RBP1.33□□□□□ -2.2
SEC8YPR055W YNL193WP53870 558 aa1.33□□□□□ -2.2
SEC8YPR055W ORC4P54791 529 aa1.33□□□□□ -2.2
SEC8YPR055W TMN2Q04562 672 aa1.33□□□□□ -2.2
SEC8YPR055W GAD1Q04792 585 aa1.33□□□□□ -2.2
SEC8YPR055W MCH5Q08777 521 aa1.33□□□□□ -2.2
SEC8YPR055W HRP1Q99383 534 aaKnown RBP1.33□□□□□ -2.2
SEC8YPR055W SFP1P32432 683 aa1.32□□□□□ -2.2
SEC8YPR055W HIR1P32479 840 aa1.32□□□□□ -2.2
SEC8YPR055W MTH1P35198 433 aa1.32□□□□□ -2.2
SEC8YPR055W PCM1P38628 557 aaKnown RBP1.32□□□□□ -2.2
SEC8YPR055W YJR142WP47173 342 aa1.32□□□□□ -2.2
SEC8YPR055W PAN2P53010 1115 aaPredicted RBP1.32□□□□□ -2.2
SEC8YPR055W UGO1Q03327 502 aa1.32□□□□□ -2.2
SEC8YPR055W ADY4Q05955 493 aa1.32□□□□□ -2.2
SEC8YPR055W ISA1Q07821 250 aaPredicted RBP1.32□□□□□ -2.2
SEC8YPR055W YLR001CQ07895 862 aa1.32□□□□□ -2.2
SEC8YPR055W GIN4Q12263 1142 aa1.32□□□□□ -2.2
SEC8YPR055W YHR202WP38887 602 aa1.32□□□□□ -2.2
SEC8YPR055W YIR042CP40586 236 aa1.32□□□□□ -2.2
SEC8YPR055W PCL10P53124 433 aa1.32□□□□□ -2.2
SEC8YPR055W POB3Q04636 552 aaKnown RBP1.32□□□□□ -2.2
SEC8YPR055W FPR4Q06205 392 aaPredicted RBP1.32□□□□□ -2.2
SEC8YPR055W GUD1Q07729 489 aa1.32□□□□□ -2.2
SEC8YPR055W MRH1Q12117 320 aaPredicted RBP1.32□□□□□ -2.2
SEC8YPR055W NOP14Q99207 810 aaKnown RBP1.32□□□□□ -2.2
SEC8YPR055W LAT1P12695 482 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W RNR1P21524 888 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W CCR4P31384 837 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W YKR018CP36114 725 aa1.31□□□□□ -2.2
SEC8YPR055W MIP6P38760 659 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W NUG1P40010 520 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W VPS36Q06696 566 aa1.31□□□□□ -2.2
SEC8YPR055W DCS2Q12123 353 aa1.31□□□□□ -2.2
SEC8YPR055W PRP19P32523 503 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W OAR1P35731 278 aa1.31□□□□□ -2.2
SEC8YPR055W TDP1P38319 544 aa1.31□□□□□ -2.2
SEC8YPR055W YBR259WP38338 688 aa1.31□□□□□ -2.2
SEC8YPR055W HLJ1P48353 224 aa1.31□□□□□ -2.2
SEC8YPR055W UBC11P52492 156 aa1.31□□□□□ -2.2
SEC8YPR055W ARG5,6Q01217 863 aa1.31□□□□□ -2.2
SEC8YPR055W CTK1Q03957 528 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W OMS1Q06668 471 aa1.31□□□□□ -2.2
SEC8YPR055W MLH3Q12083 715 aa1.31□□□□□ -2.2
SEC8YPR055W ACF2Q12168 779 aa1.31□□□□□ -2.2
SEC8YPR055W SUT2Q12286 268 aa1.31□□□□□ -2.2
SEC8YPR055W PYC1P11154 1178 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W PHO11P35842 467 aa1.31□□□□□ -2.2
SEC8YPR055W RRP14P36080 434 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W PHO12P38693 467 aa1.31□□□□□ -2.2
SEC8YPR055W SDS3P40505 327 aa1.31□□□□□ -2.2
SEC8YPR055W YJR096WP47137 282 aa1.31□□□□□ -2.2
SEC8YPR055W AMA1P50082 593 aa1.31□□□□□ -2.2
SEC8YPR055W LGE1Q02796 332 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W RCR2Q03446 210 aaKnown RBP1.31□□□□□ -2.2
SEC8YPR055W SGO1Q08490 590 aa1.31□□□□□ -2.2
SEC8YPR055W USV1Q12132 391 aa1.31□□□□□ -2.2
SEC8YPR055W IMG2P25642 146 aaPredicted RBP1.3□□□□□ -2.2
SEC8YPR055W DAL3P32459 195 aa1.3□□□□□ -2.2
SEC8YPR055W TYS1P36421 394 aaKnown RBP1.3□□□□□ -2.2
SEC8YPR055W SSZ1P38788 538 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms