RNA–Protein interactions for RNA: YOR004W

UTP23, Transcript of Component of the small subunit processome, yeast

Gene UTP23, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP23	YOR004W	RKM3	P38222	552 aa		4.58	□□□□□ -1.68
UTP23	YOR004W	YBR184W	P38299	523 aa		4.58	□□□□□ -1.68
UTP23	YOR004W	RSM25	P40496	264 aa		4.58	□□□□□ -1.68
UTP23	YOR004W	HYR1	P40581	163 aa	Known RBP	4.58	□□□□□ -1.68
UTP23	YOR004W	PAP2	P53632	584 aa	Known RBP	4.58	□□□□□ -1.68
UTP23	YOR004W	VPS30	Q02948	557 aa		4.58	□□□□□ -1.68
UTP23	YOR004W	RTT109	Q07794	436 aa		4.58	□□□□□ -1.68
UTP23	YOR004W	USO1	P25386	1790 aa		4.58	□□□□□ -1.68
UTP23	YOR004W	SMC3	P47037	1230 aa		4.57	□□□□□ -1.68
UTP23	YOR004W	CCM1	P48237	864 aa	Predicted RBP	4.57	□□□□□ -1.68
UTP23	YOR004W	RSC1	P53236	928 aa		4.57	□□□□□ -1.68
UTP23	YOR004W	WRS1	Q12109	432 aa	Known RBP	4.57	□□□□□ -1.68
UTP23	YOR004W	RPO41	P13433	1351 aa	Known RBP	4.56	□□□□□ -1.68
UTP23	YOR004W	APC1	P53886	1748 aa		4.56	□□□□□ -1.68
UTP23	YOR004W	RNR2	P09938	399 aa	Known RBP	4.56	□□□□□ -1.68
UTP23	YOR004W	EFT1	P32324	842 aa	Known RBP	4.56	□□□□□ -1.68
UTP23	YOR004W	CDC11	P32458	415 aa		4.56	□□□□□ -1.68
UTP23	YOR004W	RPN12	P32496	274 aa		4.56	□□□□□ -1.68
UTP23	YOR004W	STE14	P32584	239 aa		4.56	□□□□□ -1.68
UTP23	YOR004W	HBS1	P32769	611 aa	Known RBP	4.56	□□□□□ -1.68
UTP23	YOR004W	MIC60	P36112	540 aa		4.56	□□□□□ -1.68
UTP23	YOR004W	STU2	P46675	888 aa		4.56	□□□□□ -1.68
UTP23	YOR004W	PFD1	P46988	109 aa		4.56	□□□□□ -1.68
UTP23	YOR004W	SSL1	Q04673	461 aa	Predicted RBP	4.56	□□□□□ -1.68
UTP23	YOR004W	LYS2	P07702	1392 aa		4.55	□□□□□ -1.68
UTP23	YOR004W	RFA1	P22336	621 aa	Known RBP	4.55	□□□□□ -1.68
UTP23	YOR004W	GRX1	P25373	110 aa	Known RBP	4.55	□□□□□ -1.68
UTP23	YOR004W	TYS1	P36421	394 aa	Known RBP	4.55	□□□□□ -1.68
UTP23	YOR004W	CIR1	P42940	261 aa		4.55	□□□□□ -1.68
UTP23	YOR004W	UTP8	P53276	713 aa	Known RBP	4.55	□□□□□ -1.68
UTP23	YOR004W	BUL2	Q03758	920 aa	Known RBP	4.55	□□□□□ -1.68
UTP23	YOR004W	NKP2	Q06162	153 aa		4.55	□□□□□ -1.68
UTP23	YOR004W	FMP25	Q08023	583 aa		4.55	□□□□□ -1.68
UTP23	YOR004W	SSF2	Q12153	453 aa	Predicted RBP	4.55	□□□□□ -1.68
UTP23	YOR004W	TAD3	Q9URQ3	322 aa		4.55	□□□□□ -1.68
UTP23	YOR004W	AUS1	Q08409	1394 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	FBP1	P09201	348 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	RAD53	P22216	821 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	REC104	P33323	182 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	MPE1	P35728	441 aa	Known RBP	4.54	□□□□□ -1.68
UTP23	YOR004W	KTR4	P38131	464 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	MAM1	P40065	302 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	TOK1	P40310	691 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	ALR2	P43553	858 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	BUL1	P48524	976 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	MDG1	P53885	366 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	GIS1	Q03833	894 aa		4.54	□□□□□ -1.68
UTP23	YOR004W	ETT1	Q08421	412 aa	Known RBP	4.54	□□□□□ -1.68
UTP23	YOR004W	LEU2	P04173	364 aa	Predicted RBP	4.53	□□□□□ -1.68
UTP23	YOR004W	TRP4	P07285	380 aa	Predicted RBP	4.53	□□□□□ -1.68
UTP23	YOR004W	CDC16	P09798	840 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	BIK1	P11709	440 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	RPD3	P32561	433 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	TYE7	P33122	291 aa	Predicted RBP	4.53	□□□□□ -1.68
UTP23	YOR004W	LTV1	P34078	463 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	ERT1	P38140	529 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	CIN4	P39110	191 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	YIL108W	P40483	696 aa	Known RBP	4.53	□□□□□ -1.68
UTP23	YOR004W	NAN1	Q02931	896 aa	Known RBP	4.53	□□□□□ -1.68
UTP23	YOR004W	HIM1	Q06674	414 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	SPO75	Q07798	868 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	YLR040C	Q07988	224 aa		4.53	□□□□□ -1.68
UTP23	YOR004W	RPS19A	P07280	144 aa	Known RBP	4.52	□□□□□ -1.69
UTP23	YOR004W	RPS19B	P07281	144 aa	Predicted RBP	4.52	□□□□□ -1.69
UTP23	YOR004W	OAR1	P35731	278 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	MRPL10	P36520	322 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	YBR284W	P38150	797 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	BRN1	P38170	754 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	SUL1	P38359	859 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	RFC1	P38630	861 aa	Known RBP	4.52	□□□□□ -1.69
UTP23	YOR004W	NMD2	P38798	1089 aa	Known RBP	4.52	□□□□□ -1.69
UTP23	YOR004W	YNG2	P38806	282 aa	Known RBP	4.52	□□□□□ -1.69
UTP23	YOR004W	SDP1	P40479	209 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	CEP3	P40969	608 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	NPA3	P47122	385 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	ERP6	P53198	216 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	YNL050C	P53952	270 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	YKR011C	Q02209	353 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	SLU7	Q02775	382 aa	Known RBP	4.52	□□□□□ -1.69
UTP23	YOR004W	EAF1	Q06337	982 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	YPR071W	Q12346	211 aa		4.52	□□□□□ -1.69
UTP23	YOR004W	ERG4	P25340	473 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	RPL8B	P29453	256 aa	Known RBP	4.51	□□□□□ -1.69
UTP23	YOR004W	SEC21	P32074	935 aa	Known RBP	4.51	□□□□□ -1.69
UTP23	YOR004W	MOH1	P38191	138 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	ZDS1	P50111	915 aa	Known RBP	4.51	□□□□□ -1.69
UTP23	YOR004W	SPO1	P53541	631 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	VPS60	Q03390	229 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	VPS20	Q04272	221 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	UBX5	Q06682	500 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	PEX19	Q07418	342 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	YOL073C	Q08232	322 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	PPM2	Q08282	695 aa		4.51	□□□□□ -1.69
UTP23	YOR004W	NOP14	Q99207	810 aa	Known RBP	4.51	□□□□□ -1.69
UTP23	YOR004W	URA1	P28272	314 aa	Predicted RBP	4.5	□□□□□ -1.69
UTP23	YOR004W	PET10	P36139	283 aa		4.5	□□□□□ -1.69
UTP23	YOR004W	AKL1	P38080	1108 aa	Known RBP	4.5	□□□□□ -1.69
UTP23	YOR004W	CTF8	P38877	133 aa		4.5	□□□□□ -1.69
UTP23	YOR004W	RAD26	P40352	1085 aa		4.5	□□□□□ -1.69
UTP23	YOR004W	HDA1	P53973	706 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms