RNA–Protein interactions for RNA: YOL143C

RIB4, Transcript of Lumazine synthase (DMRL synthase), yeast

Gene RIB4, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB4	YOL143C	EMC3	P36039	253 aa		4.8	□□□□□ -1.64
RIB4	YOL143C	SHM2	P37291	469 aa	Known RBP	4.8	□□□□□ -1.64
RIB4	YOL143C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
RIB4	YOL143C	DOT5	P40553	215 aa		4.8	□□□□□ -1.64
RIB4	YOL143C	MCM6	P53091	1017 aa	Known RBP	4.8	□□□□□ -1.64
RIB4	YOL143C	LRS4	Q04087	347 aa	Known RBP	4.8	□□□□□ -1.64
RIB4	YOL143C	NPC2	Q12408	173 aa		4.8	□□□□□ -1.64
RIB4	YOL143C	DAL7	P21826	554 aa		4.79	□□□□□ -1.64
RIB4	YOL143C	TYE7	P33122	291 aa	Predicted RBP	4.79	□□□□□ -1.64
RIB4	YOL143C	ATG19	P35193	415 aa		4.79	□□□□□ -1.64
RIB4	YOL143C	TAD1	P53065	400 aa		4.79	□□□□□ -1.64
RIB4	YOL143C	PHO8	P11491	566 aa		4.78	□□□□□ -1.64
RIB4	YOL143C	RAD53	P22216	821 aa		4.78	□□□□□ -1.64
RIB4	YOL143C	SPC29	P33419	253 aa		4.78	□□□□□ -1.64
RIB4	YOL143C	NIT3	P49954	291 aa		4.78	□□□□□ -1.64
RIB4	YOL143C	HSV2	P50079	448 aa	Predicted RBP	4.78	□□□□□ -1.64
RIB4	YOL143C	MNN10	P50108	393 aa	Known RBP	4.78	□□□□□ -1.64
RIB4	YOL143C	SLU7	Q02775	382 aa	Known RBP	4.78	□□□□□ -1.64
RIB4	YOL143C	VPS30	Q02948	557 aa		4.78	□□□□□ -1.64
RIB4	YOL143C	PDS5	Q04264	1277 aa		4.78	□□□□□ -1.64
RIB4	YOL143C	MET7	Q08645	548 aa		4.78	□□□□□ -1.64
RIB4	YOL143C	RPS9A	O13516	197 aa	Known RBP	4.77	□□□□□ -1.65
RIB4	YOL143C	YEF3	P16521	1044 aa	Known RBP	4.77	□□□□□ -1.65
RIB4	YOL143C	STE11	P23561	717 aa		4.77	□□□□□ -1.65
RIB4	YOL143C	SED4	P25365	1065 aa		4.77	□□□□□ -1.65
RIB4	YOL143C	YKL222C	P35995	705 aa		4.77	□□□□□ -1.65
RIB4	YOL143C	PHO23	P50947	330 aa		4.77	□□□□□ -1.65
RIB4	YOL143C	EXG2	P52911	562 aa		4.77	□□□□□ -1.65
RIB4	YOL143C	TAP42	Q04372	366 aa		4.77	□□□□□ -1.65
RIB4	YOL143C	LAS17	Q12446	633 aa		4.77	□□□□□ -1.65
RIB4	YOL143C	RPP2A	P05319	106 aa	Known RBP	4.76	□□□□□ -1.65
RIB4	YOL143C	KAR4	P25583	335 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	PER1	P25625	357 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	CYS3	P31373	394 aa	Known RBP	4.76	□□□□□ -1.65
RIB4	YOL143C	CTF8	P38877	133 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	SDP1	P40479	209 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	RPN11	P43588	306 aa	Known RBP	4.76	□□□□□ -1.65
RIB4	YOL143C	DAM1	P53267	343 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	NOG2	P53742	486 aa	Known RBP	4.76	□□□□□ -1.65
RIB4	YOL143C	HIM1	Q06674	414 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	HAL9	Q12180	1030 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	YOR022C	Q12204	715 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	MHP1	P43638	1398 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	RSF2	P46974	1380 aa		4.76	□□□□□ -1.65
RIB4	YOL143C	MEF1	P25039	761 aa		4.75	□□□□□ -1.65
RIB4	YOL143C	SEC21	P32074	935 aa	Known RBP	4.75	□□□□□ -1.65
RIB4	YOL143C	GRX4	P32642	244 aa		4.75	□□□□□ -1.65
RIB4	YOL143C	YKL133C	P36066	463 aa		4.75	□□□□□ -1.65
RIB4	YOL143C	ENP1	P38333	483 aa	Known RBP	4.75	□□□□□ -1.65
RIB4	YOL143C	NPR2	P39923	615 aa		4.75	□□□□□ -1.65
RIB4	YOL143C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
RIB4	YOL143C	ATP25	Q03153	612 aa		4.75	□□□□□ -1.65
RIB4	YOL143C	FPR4	Q06205	392 aa	Predicted RBP	4.75	□□□□□ -1.65
RIB4	YOL143C	YLR125W	Q12138	136 aa		4.75	□□□□□ -1.65
RIB4	YOL143C	THI4	P32318	326 aa		4.74	□□□□□ -1.65
RIB4	YOL143C	DCG1	P32460	244 aa		4.74	□□□□□ -1.65
RIB4	YOL143C	MSS4	P38994	779 aa		4.74	□□□□□ -1.65
RIB4	YOL143C	HXT16	P47185	567 aa		4.74	□□□□□ -1.65
RIB4	YOL143C	PUS2	P53167	370 aa		4.74	□□□□□ -1.65
RIB4	YOL143C	RNH70	P53331	553 aa		4.74	□□□□□ -1.65
RIB4	YOL143C	DUS1	P53759	423 aa	Known RBP	4.74	□□□□□ -1.65
RIB4	YOL143C	YDR514C	Q04408	483 aa		4.74	□□□□□ -1.65
RIB4	YOL143C	ROM2	P51862	1356 aa	Known RBP	4.74	□□□□□ -1.65
RIB4	YOL143C	AUS1	Q08409	1394 aa		4.74	□□□□□ -1.65
RIB4	YOL143C	PMA1	P05030	918 aa	Known RBP	4.73	□□□□□ -1.65
RIB4	YOL143C	PRP4	P20053	465 aa	Known RBP	4.73	□□□□□ -1.65
RIB4	YOL143C	CAD1	P24813	409 aa	Known RBP	4.73	□□□□□ -1.65
RIB4	YOL143C	HCM1	P25364	564 aa		4.73	□□□□□ -1.65
RIB4	YOL143C	MSH2	P25847	964 aa		4.73	□□□□□ -1.65
RIB4	YOL143C	YHR078W	P38799	552 aa		4.73	□□□□□ -1.65
RIB4	YOL143C	RSC3	Q06639	885 aa		4.73	□□□□□ -1.65
RIB4	YOL143C	NTO1	Q12311	748 aa		4.73	□□□□□ -1.65
RIB4	YOL143C	MDM12	Q92328	271 aa		4.73	□□□□□ -1.65
RIB4	YOL143C	RRP5	Q05022	1729 aa	Known RBP	4.72	□□□□□ -1.65
RIB4	YOL143C	PRC1	P00729	532 aa		4.72	□□□□□ -1.65
RIB4	YOL143C	CDC9	P04819	755 aa		4.72	□□□□□ -1.65
RIB4	YOL143C	TUB3	P09734	445 aa	Known RBP	4.72	□□□□□ -1.65
RIB4	YOL143C	SAP190	P36123	1033 aa		4.72	□□□□□ -1.65
RIB4	YOL143C	YKR075C	P36155	307 aa		4.72	□□□□□ -1.65
RIB4	YOL143C	OSW7	P43611	510 aa		4.72	□□□□□ -1.65
RIB4	YOL143C	LYS4	P49367	693 aa	Predicted RBP	4.72	□□□□□ -1.65
RIB4	YOL143C	REH1	Q06709	432 aa		4.72	□□□□□ -1.65
RIB4	YOL143C	YBR182C-A	Q8TGU6	64 aa		4.72	□□□□□ -1.65
RIB4	YOL143C	SEC3	P33332	1336 aa	Known RBP	4.72	□□□□□ -1.65
RIB4	YOL143C	MET6	P05694	767 aa	Known RBP	4.71	□□□□□ -1.66
RIB4	YOL143C	PFK1	P16861	987 aa	Known RBP	4.71	□□□□□ -1.66
RIB4	YOL143C	MTC2	P34246	357 aa		4.71	□□□□□ -1.66
RIB4	YOL143C	DSS1	P39112	969 aa		4.71	□□□□□ -1.66
RIB4	YOL143C	BUL1	P48524	976 aa		4.71	□□□□□ -1.66
RIB4	YOL143C	ALG12	P53730	551 aa		4.71	□□□□□ -1.66
RIB4	YOL143C	ADE16	P54113	591 aa	Known RBP	4.71	□□□□□ -1.66
RIB4	YOL143C	PPG1	P32838	368 aa		4.7	□□□□□ -1.66
RIB4	YOL143C	SET5	P38890	526 aa	Known RBP	4.7	□□□□□ -1.66
RIB4	YOL143C	ERG5	P54781	538 aa		4.7	□□□□□ -1.66
RIB4	YOL143C	ASM4	Q05166	528 aa		4.7	□□□□□ -1.66
RIB4	YOL143C	YDR338C	Q05497	695 aa		4.7	□□□□□ -1.66
RIB4	YOL143C	PEX19	Q07418	342 aa		4.7	□□□□□ -1.66
RIB4	YOL143C	NTG2	Q08214	380 aa		4.7	□□□□□ -1.66
RIB4	YOL143C	GUP2	Q08929	609 aa		4.7	□□□□□ -1.66
RIB4	YOL143C	THI21	Q08975	551 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms