RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W LCP5P40079 357 aaPredicted RBP5.61□□□□□ -1.51
SPG4YMR107W YGR021WP53212 290 aa5.61□□□□□ -1.51
SPG4YMR107W UBP2Q01476 1272 aa5.61□□□□□ -1.51
SPG4YMR107W TLG1Q03322 224 aa5.61□□□□□ -1.51
SPG4YMR107W HFD1Q04458 532 aa5.61□□□□□ -1.51
SPG4YMR107W YDR341CQ05506 607 aaKnown RBP5.61□□□□□ -1.51
SPG4YMR107W VAM6Q07468 1049 aa5.61□□□□□ -1.51
SPG4YMR107W SPO75Q07798 868 aa5.61□□□□□ -1.51
SPG4YMR107W YPL216WQ08964 1102 aa5.61□□□□□ -1.51
SPG4YMR107W GPR1Q12361 961 aa5.61□□□□□ -1.51
SPG4YMR107W RPL24AP04449 155 aaKnown RBP5.6□□□□□ -1.51
SPG4YMR107W HEM1P09950 548 aaPredicted RBP5.6□□□□□ -1.51
SPG4YMR107W PWP1P21304 576 aaKnown RBP5.6□□□□□ -1.51
SPG4YMR107W PUF4P25339 888 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SPG4YMR107W GPI10P30777 616 aa5.6□□□□□ -1.51
SPG4YMR107W MRE11P32829 692 aa5.6□□□□□ -1.51
SPG4YMR107W TRM2P33753 639 aa5.6□□□□□ -1.51
SPG4YMR107W PET112P33893 541 aa5.6□□□□□ -1.51
SPG4YMR107W SIP2P34164 415 aaKnown RBP5.6□□□□□ -1.51
SPG4YMR107W SQT1P35184 431 aa5.6□□□□□ -1.51
SPG4YMR107W STT3P39007 718 aaKnown RBP5.6□□□□□ -1.51
SPG4YMR107W BRO1P48582 844 aa5.6□□□□□ -1.51
SPG4YMR107W COS6P53344 381 aa5.6□□□□□ -1.51
SPG4YMR107W GDE1Q02979 1223 aa5.6□□□□□ -1.51
SPG4YMR107W GIR2Q03768 265 aaPredicted RBP5.6□□□□□ -1.51
SPG4YMR107W HMO1Q03973 246 aaKnown RBP5.6□□□□□ -1.51
SPG4YMR107W FMP42Q04991 504 aa5.6□□□□□ -1.51
SPG4YMR107W DON1Q05610 365 aa5.6□□□□□ -1.51
SPG4YMR107W SNX3Q08826 162 aaKnown RBP5.6□□□□□ -1.51
SPG4YMR107W TAF3Q12297 353 aa5.6□□□□□ -1.51
SPG4YMR107W YPT6Q99260 215 aa5.6□□□□□ -1.51
SPG4YMR107W JIP3O13555 125 aa5.59□□□□□ -1.51
SPG4YMR107W SUI3P09064 285 aaKnown RBP5.59□□□□□ -1.51
SPG4YMR107W YML002WP0CF17 737 aa5.59□□□□□ -1.51
SPG4YMR107W SSB1P11484 613 aaKnown RBP5.59□□□□□ -1.51
SPG4YMR107W MSB1P21339 1137 aaKnown RBP5.59□□□□□ -1.51
SPG4YMR107W RNR3P21672 869 aaKnown RBP5.59□□□□□ -1.51
SPG4YMR107W GSY1P23337 708 aa5.59□□□□□ -1.51
SPG4YMR107W DPB2P24482 689 aaPredicted RBP5.59□□□□□ -1.51
SPG4YMR107W SEC20P28791 383 aa5.59□□□□□ -1.51
SPG4YMR107W ACH1P32316 526 aa5.59□□□□□ -1.51
SPG4YMR107W ANP1P32629 500 aa5.59□□□□□ -1.51
SPG4YMR107W UBC6P33296 250 aaPredicted RBP5.59□□□□□ -1.51
SPG4YMR107W YKR015CP36111 568 aa5.59□□□□□ -1.51
SPG4YMR107W SSB2P40150 613 aaKnown RBP5.59□□□□□ -1.51
SPG4YMR107W FMP33P46998 180 aa5.59□□□□□ -1.51
SPG4YMR107W CSN12P47130 423 aa5.59□□□□□ -1.51
SPG4YMR107W UBA2P52488 636 aa5.59□□□□□ -1.51
SPG4YMR107W MIG2P53035 382 aa5.59□□□□□ -1.51
SPG4YMR107W USE1P53146 245 aa5.59□□□□□ -1.51
SPG4YMR107W UFD2P54860 961 aa5.59□□□□□ -1.51
SPG4YMR107W RPL22BP56628 122 aaKnown RBP5.59□□□□□ -1.51
SPG4YMR107W FRK1Q03002 865 aaPredicted RBP5.59□□□□□ -1.51
SPG4YMR107W LAM6Q08001 693 aa5.59□□□□□ -1.51
SPG4YMR107W TCO89Q08921 799 aa5.59□□□□□ -1.51
SPG4YMR107W ACM1Q08981 209 aa5.59□□□□□ -1.51
SPG4YMR107W AIM41Q12032 185 aa5.59□□□□□ -1.51
SPG4YMR107W FAL1Q12099 399 aaKnown RBP5.59□□□□□ -1.51
SPG4YMR107W SGT2Q12118 346 aaKnown RBP5.59□□□□□ -1.51
SPG4YMR107W SEY1Q99287 776 aa5.59□□□□□ -1.51
SPG4YMR107W YEL076C-AP0CX16 216 aa5.58□□□□□ -1.52
SPG4YMR107W YLR464WP0CX17 216 aa5.58□□□□□ -1.52
SPG4YMR107W RRT12P25381 491 aa5.58□□□□□ -1.52
SPG4YMR107W KIP2P28743 706 aa5.58□□□□□ -1.52
SPG4YMR107W SMY1P32364 656 aaKnown RBP5.58□□□□□ -1.52
SPG4YMR107W PET10P36139 283 aa5.58□□□□□ -1.52
SPG4YMR107W AST2P39945 430 aaKnown RBP5.58□□□□□ -1.52
SPG4YMR107W YEL076CP39971 216 aa5.58□□□□□ -1.52
SPG4YMR107W PRK1P40494 810 aa5.58□□□□□ -1.52
SPG4YMR107W SDS3P40505 327 aa5.58□□□□□ -1.52
SPG4YMR107W YIR042CP40586 236 aa5.58□□□□□ -1.52
SPG4YMR107W RPC17P47076 161 aa5.58□□□□□ -1.52
SPG4YMR107W SDA1P53313 767 aaKnown RBP5.58□□□□□ -1.52
SPG4YMR107W RET3P53600 189 aa5.58□□□□□ -1.52
SPG4YMR107W JJJ1P53863 590 aa5.58□□□□□ -1.52
SPG4YMR107W TBF1Q02457 562 aa5.58□□□□□ -1.52
SPG4YMR107W SYH1Q02875 849 aaKnown RBP5.58□□□□□ -1.52
SPG4YMR107W ACL4Q03771 387 aa5.58□□□□□ -1.52
SPG4YMR107W CWC15Q03772 175 aaKnown RBP5.58□□□□□ -1.52
SPG4YMR107W SMP3Q04174 516 aa5.58□□□□□ -1.52
SPG4YMR107W NOP12Q08208 459 aaKnown RBP5.58□□□□□ -1.52
SPG4YMR107W SSP2Q08646 371 aa5.58□□□□□ -1.52
SPG4YMR107W CDC53Q12018 815 aaKnown RBP5.58□□□□□ -1.52
SPG4YMR107W HIF1Q12373 385 aa5.58□□□□□ -1.52
SPG4YMR107W CEX1Q12453 761 aa5.58□□□□□ -1.52
SPG4YMR107W NOT5Q12514 560 aaPredicted RBP5.58□□□□□ -1.52
SPG4YMR107W POL3P15436 1097 aa5.57□□□□□ -1.52
SPG4YMR107W TRM1P15565 570 aaKnown RBP5.57□□□□□ -1.52
SPG4YMR107W STI1P15705 589 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SPG4YMR107W MAK31P23059 88 aa5.57□□□□□ -1.52
SPG4YMR107W MEF1P25039 761 aa5.57□□□□□ -1.52
SPG4YMR107W YJU3P28321 313 aa5.57□□□□□ -1.52
SPG4YMR107W BRF1P29056 596 aa5.57□□□□□ -1.52
SPG4YMR107W YKL050CP35736 922 aa5.57□□□□□ -1.52
SPG4YMR107W HES1P35843 434 aa5.57□□□□□ -1.52
SPG4YMR107W MAL31P38156 614 aa5.57□□□□□ -1.52
SPG4YMR107W SMC2P38989 1170 aaKnown RBP5.57□□□□□ -1.52
SPG4YMR107W END3P39013 349 aa5.57□□□□□ -1.52
SPG4YMR107W GDH3P39708 457 aa5.57□□□□□ -1.52
SPG4YMR107W BIM1P40013 344 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms