RNA–Protein interactions for RNA: YLR120C

YPS1, Transcript of Aspartic protease, yeast

Gene YPS1, Length 1,710 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS1	YLR120C	RNR1	P21524	888 aa	Known RBP	13.46	□□□□□ -0.25
YPS1	YLR120C	VMA4	P22203	233 aa	Known RBP	13.46	□□□□□ -0.25
YPS1	YLR120C	DYS1	P38791	387 aa		13.46	□□□□□ -0.25
YPS1	YLR120C	SBE2	P42223	864 aa	Known RBP	13.46	□□□□□ -0.25
YPS1	YLR120C	PHO86	P46956	311 aa		13.46	□□□□□ -0.25
YPS1	YLR120C	PSP2	P50109	593 aa	Known RBP	13.46	□□□□□ -0.25
YPS1	YLR120C	HIF1	Q12373	385 aa		13.46	□□□□□ -0.25
YPS1	YLR120C	AI5_BETA	Q9ZZX0	354 aa		13.46	□□□□□ -0.25
YPS1	YLR120C	CAP1	P28495	268 aa	Known RBP	13.45	□□□□□ -0.26
YPS1	YLR120C	APE3	P37302	537 aa	Known RBP	13.45	□□□□□ -0.26
YPS1	YLR120C	VID24	P38263	362 aa		13.45	□□□□□ -0.26
YPS1	YLR120C	SAP185	P40856	1058 aa		13.45	□□□□□ -0.26
YPS1	YLR120C	TRS85	P46944	698 aa		13.45	□□□□□ -0.26
YPS1	YLR120C	TPO2	P53283	614 aa		13.45	□□□□□ -0.26
YPS1	YLR120C	MSC6	Q08818	692 aa	Known RBP	13.45	□□□□□ -0.26
YPS1	YLR120C	GIS3	Q12418	502 aa		13.45	□□□□□ -0.26
YPS1	YLR120C	ASH1	P34233	588 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	13.44	□□□□□ -0.26	not detected
YPS1	YLR120C	ASG1	P40467	964 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	ACF4	P47129	309 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	TRS130	Q03660	1102 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	PNP1	Q05788	311 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	TRM11	Q12463	433 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	SEY1	Q99287	776 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	PYC1	P11154	1178 aa	Known RBP	13.44	□□□□□ -0.26
YPS1	YLR120C	KIN82	P25341	720 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	PLC1	P32383	869 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	DPH2	P32461	534 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	MOT2	P34909	587 aa	Known RBP	13.44	□□□□□ -0.26
YPS1	YLR120C	INA22	P40576	216 aa		13.44	□□□□□ -0.26
YPS1	YLR120C	ADH4	P10127	382 aa		13.43	□□□□□ -0.26
YPS1	YLR120C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	13.43	□□□□□ -0.26	not detected
YPS1	YLR120C	RRT12	P25381	491 aa		13.43	□□□□□ -0.26
YPS1	YLR120C	YUR1	P26725	428 aa		13.43	□□□□□ -0.26
YPS1	YLR120C	CPR6	P53691	371 aa	Known RBP	13.43	□□□□□ -0.26
YPS1	YLR120C	SHS1	Q07657	551 aa		13.43	□□□□□ -0.26
YPS1	YLR120C	ABP140	Q08641	628 aa	Known RBP	13.43	□□□□□ -0.26
YPS1	YLR120C	ACM1	Q08981	209 aa		13.43	□□□□□ -0.26
YPS1	YLR120C	ECM3	Q99252	613 aa		13.43	□□□□□ -0.26
YPS1	YLR120C	COX11	P19516	300 aa	Known RBP	13.42	□□□□□ -0.26
YPS1	YLR120C	GYP6	P32806	458 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	OAF3	P36023	863 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	MSG5	P38590	489 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	SMX2	P40204	77 aa	Known RBP	13.42	□□□□□ -0.26
YPS1	YLR120C	RPL22B	P56628	122 aa	Known RBP	13.42	□□□□□ -0.26
YPS1	YLR120C	ERV41	Q04651	352 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	ECM7	Q06200	448 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	FRA1	Q07825	749 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	SPO16	P17122	198 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	URB2	P47108	1174 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	USA1	Q03714	838 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	UFO1	Q04511	668 aa		13.42	□□□□□ -0.26
YPS1	YLR120C	PMS1	P14242	873 aa		13.41	□□□□□ -0.26
YPS1	YLR120C	KAR3	P17119	729 aa		13.41	□□□□□ -0.26
YPS1	YLR120C	ILV6	P25605	309 aa	Known RBP	13.41	□□□□□ -0.26
YPS1	YLR120C	RME1	P32338	300 aa	Known RBP	13.41	□□□□□ -0.26
YPS1	YLR120C	YME1	P32795	747 aa		13.41	□□□□□ -0.26
YPS1	YLR120C	MMS4	P38257	691 aa		13.41	□□□□□ -0.26
YPS1	YLR120C	VHC1	P38329	1120 aa		13.41	□□□□□ -0.26
YPS1	YLR120C	GUA1	P38625	525 aa	Known RBP	13.41	□□□□□ -0.26
YPS1	YLR120C	DAS1	P47005	663 aa		13.41	□□□□□ -0.26
YPS1	YLR120C	NOG2	P53742	486 aa	Known RBP	13.41	□□□□□ -0.26
YPS1	YLR120C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	13.4	□□□□□ -0.26	not detected
YPS1	YLR120C	GPI10	P30777	616 aa		13.4	□□□□□ -0.26
YPS1	YLR120C	RPC37	P36121	282 aa		13.4	□□□□□ -0.26
YPS1	YLR120C	PMC1	P38929	1173 aa	Predicted RBP	13.4	□□□□□ -0.26
YPS1	YLR120C	MNP1	P53163	194 aa	Predicted RBP	13.4	□□□□□ -0.26
YPS1	YLR120C	SDH5	Q08230	162 aa		13.4	□□□□□ -0.26
YPS1	YLR120C	ADE3	P07245	946 aa	Known RBP	13.39	□□□□□ -0.27
YPS1	YLR120C	POL3	P15436	1097 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	SMY2	P32909	740 aa	Known RBP	13.39	□□□□□ -0.27
YPS1	YLR120C	SEG2	P34250	1132 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	SPR3	P41901	512 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	PIG1	Q06216	648 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	HFI1	Q12060	488 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	YOL087C	Q99247	1116 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	ECM29	P38737	1868 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	BI2	P03873	423 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	BI4	P03879	638 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	YER152C	P10356	443 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	PEP5	P12868	1029 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	SFL1	P20134	766 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	SCJ1	P25303	377 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	CBR1	P38626	284 aa	Known RBP	13.39	□□□□□ -0.27
YPS1	YLR120C	YMR134W	P40207	237 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	SCS3	P53012	380 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	ZPS1	Q12512	249 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	BI3	Q9ZZW7	517 aa		13.39	□□□□□ -0.27
YPS1	YLR120C	TMT1	P32643	299 aa		13.38	□□□□□ -0.27
YPS1	YLR120C	ABD1	P32783	436 aa	Predicted RBP	13.38	□□□□□ -0.27
YPS1	YLR120C	SKG6	P32900	734 aa	Predicted RBP	13.38	□□□□□ -0.27
YPS1	YLR120C	RSC30	P38781	883 aa		13.38	□□□□□ -0.27
YPS1	YLR120C	ATG1	P53104	897 aa		13.38	□□□□□ -0.27
YPS1	YLR120C	IVY1	Q04934	453 aa		13.38	□□□□□ -0.27
YPS1	YLR120C	YOR059C	Q08448	450 aa	Known RBP	13.38	□□□□□ -0.27
YPS1	YLR120C	TY3A-G	Q12173	290 aa		13.38	□□□□□ -0.27
YPS1	YLR120C	TIF6	Q12522	245 aa	Known RBP	13.38	□□□□□ -0.27
YPS1	YLR120C	TY3A-I	Q99219	290 aa		13.38	□□□□□ -0.27
YPS1	YLR120C	RGT1	P32862	1170 aa		13.37	□□□□□ -0.27
YPS1	YLR120C	CCL1	P37366	393 aa		13.37	□□□□□ -0.27

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms