RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W AIM21P40563 679 aa3.23□□□□□ -1.89
PHD1YKL043W NOP9P47077 666 aaKnown RBP3.23□□□□□ -1.89
PHD1YKL043W ZPR1P53303 486 aaKnown RBP3.23□□□□□ -1.89
PHD1YKL043W UFD2P54860 961 aa3.23□□□□□ -1.89
PHD1YKL043W TMA20P89886 181 aaPredicted RBP3.23□□□□□ -1.89
PHD1YKL043W NAM8Q00539 523 aaKnown RBP3.23□□□□□ -1.89
PHD1YKL043W UBP2Q01476 1272 aa3.23□□□□□ -1.89
PHD1YKL043W GIR2Q03768 265 aaPredicted RBP3.23□□□□□ -1.89
PHD1YKL043W PPM1Q04081 328 aa3.23□□□□□ -1.89
PHD1YKL043W FMP42Q04991 504 aa3.23□□□□□ -1.89
PHD1YKL043W OPY2Q06810 360 aa3.23□□□□□ -1.89
PHD1YKL043W SSP2Q08646 371 aa3.23□□□□□ -1.89
PHD1YKL043W RKM1Q08961 583 aaPredicted RBP3.23□□□□□ -1.89
PHD1YKL043W ATP16Q12165 160 aa3.23□□□□□ -1.89
PHD1YKL043W PHM7Q12252 991 aa3.23□□□□□ -1.89
PHD1YKL043W NYV1Q12255 253 aa3.23□□□□□ -1.89
PHD1YKL043W APC2Q12440 853 aa3.23□□□□□ -1.89
PHD1YKL043W BRR1Q99177 341 aaPredicted RBP3.23□□□□□ -1.89
PHD1YKL043W YOR111WQ99210 232 aa3.23□□□□□ -1.89
PHD1YKL043W ENO2P00925 437 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W SSC1P0CS90 654 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W MAK16P10962 306 aaPredicted RBP3.22□□□□□ -1.89
PHD1YKL043W SUP45P12385 437 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W GCN3P14741 305 aa3.22□□□□□ -1.89
PHD1YKL043W DPB2P24482 689 aaPredicted RBP3.22□□□□□ -1.89
PHD1YKL043W MEF1P25039 761 aa3.22□□□□□ -1.89
PHD1YKL043W URA1P28272 314 aaPredicted RBP3.22□□□□□ -1.89
PHD1YKL043W ISF1P32488 338 aa3.22□□□□□ -1.89
PHD1YKL043W GDA1P32621 518 aa3.22□□□□□ -1.89
PHD1YKL043W YBL055CP34220 418 aaPredicted RBP3.22□□□□□ -1.89
PHD1YKL043W SSZ1P38788 538 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W STM1P39015 273 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W SER3P40054 469 aa3.22□□□□□ -1.89
PHD1YKL043W MET18P40469 1032 aa3.22□□□□□ -1.89
PHD1YKL043W VTC2P43585 828 aa3.22□□□□□ -1.89
PHD1YKL043W FMP33P46998 180 aa3.22□□□□□ -1.89
PHD1YKL043W EAF6P47128 113 aa3.22□□□□□ -1.89
PHD1YKL043W BIR1P47134 954 aa3.22□□□□□ -1.89
PHD1YKL043W VMA10P48836 114 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W MCM6P53091 1017 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W ESBP6P53918 673 aa3.22□□□□□ -1.89
PHD1YKL043W ALD6P54115 500 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W TIM11P81449 96 aaPredicted RBP3.22□□□□□ -1.89
PHD1YKL043W PLP1Q04004 230 aa3.22□□□□□ -1.89
PHD1YKL043W SHE9Q04172 456 aa3.22□□□□□ -1.89
PHD1YKL043W MGR3Q04472 501 aa3.22□□□□□ -1.89
PHD1YKL043W TAF9Q05027 157 aa3.22□□□□□ -1.89
PHD1YKL043W YDR341CQ05506 607 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W YLR287CQ05881 355 aa3.22□□□□□ -1.89
PHD1YKL043W PIG1Q06216 648 aa3.22□□□□□ -1.89
PHD1YKL043W UTP4Q06679 776 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W VIP1Q06685 1146 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W BDF2Q07442 638 aa3.22□□□□□ -1.89
PHD1YKL043W NSE1Q07913 336 aa3.22□□□□□ -1.89
PHD1YKL043W BDS1Q08347 646 aa3.22□□□□□ -1.89
PHD1YKL043W OSW1Q08692 278 aa3.22□□□□□ -1.89
PHD1YKL043W YOR296WQ08748 1289 aa3.22□□□□□ -1.89
PHD1YKL043W YIG1Q08956 461 aa3.22□□□□□ -1.89
PHD1YKL043W HTZ1Q12692 134 aaKnown RBP3.22□□□□□ -1.89
PHD1YKL043W CDC19P00549 500 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W PGK1P00560 416 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W ENO1P00924 437 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W PET494P07390 489 aaPredicted RBP3.21□□□□□ -1.9
PHD1YKL043W YML002WP0CF17 737 aa3.21□□□□□ -1.9
PHD1YKL043W CAF20P12962 161 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W STF2P16965 84 aa3.21□□□□□ -1.9
PHD1YKL043W SRV2P17555 526 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W REC107P21651 314 aa3.21□□□□□ -1.9
PHD1YKL043W CNA1P23287 553 aa3.21□□□□□ -1.9
PHD1YKL043W YCR016WP25617 290 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W PAP1P29468 568 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W SEC65P29478 273 aa3.21□□□□□ -1.9
PHD1YKL043W EFT1P32324 842 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W AFG2P32794 780 aa3.21□□□□□ -1.9
PHD1YKL043W MRE11P32829 692 aa3.21□□□□□ -1.9
PHD1YKL043W ATO2P32907 282 aa3.21□□□□□ -1.9
PHD1YKL043W YET1P35723 206 aa3.21□□□□□ -1.9
PHD1YKL043W KES1P35844 434 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W SET3P36124 751 aa3.21□□□□□ -1.9
PHD1YKL043W NUP133P36161 1157 aa3.21□□□□□ -1.9
PHD1YKL043W SHM1P37292 490 aaPredicted RBP3.21□□□□□ -1.9
PHD1YKL043W IFA38P38286 347 aa3.21□□□□□ -1.9
PHD1YKL043W YLF2P38746 405 aa3.21□□□□□ -1.9
PHD1YKL043W PEX18P38855 283 aa3.21□□□□□ -1.9
PHD1YKL043W SMC2P38989 1170 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W CCT2P39076 527 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W PCF11P39081 626 aaPredicted RBP3.21□□□□□ -1.9
PHD1YKL043W SMX2P40204 77 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W PDS1P40316 373 aaPredicted RBP3.21□□□□□ -1.9
PHD1YKL043W SDS3P40505 327 aa3.21□□□□□ -1.9
PHD1YKL043W SER33P40510 469 aa3.21□□□□□ -1.9
PHD1YKL043W RLP7P40693 322 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W YGR237CP50089 785 aa3.21□□□□□ -1.9
PHD1YKL043W FMS1P50264 508 aa3.21□□□□□ -1.9
PHD1YKL043W MIG2P53035 382 aa3.21□□□□□ -1.9
PHD1YKL043W YGR122WP53272 402 aa3.21□□□□□ -1.9
PHD1YKL043W COS6P53344 381 aa3.21□□□□□ -1.9
PHD1YKL043W CNM67P53865 581 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W ALO1P54783 526 aaKnown RBP3.21□□□□□ -1.9
PHD1YKL043W FCP1Q03254 732 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms