RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	VPS30	Q02948	557 aa		3.96	□□□□□ -1.77
NDC80	YIL144W	YDR132C	Q03900	495 aa		3.96	□□□□□ -1.77
NDC80	YIL144W	COG4	Q06096	861 aa		3.96	□□□□□ -1.77
NDC80	YIL144W	NKP1	Q12493	238 aa		3.96	□□□□□ -1.77
NDC80	YIL144W	EMC1	P25574	760 aa		3.96	□□□□□ -1.78
NDC80	YIL144W	VPS24	P36095	224 aa	Known RBP	3.96	□□□□□ -1.78
NDC80	YIL144W	POL12	P38121	705 aa	Predicted RBP	3.96	□□□□□ -1.78
NDC80	YIL144W	FAT1	P38225	669 aa		3.96	□□□□□ -1.78
NDC80	YIL144W	SSZ1	P38788	538 aa	Known RBP	3.96	□□□□□ -1.78
NDC80	YIL144W	NOC2	P39744	710 aa	Known RBP	3.96	□□□□□ -1.78
NDC80	YIL144W	VPS27	P40343	622 aa	Known RBP	3.96	□□□□□ -1.78
NDC80	YIL144W	YGR153W	P48238	217 aa		3.96	□□□□□ -1.78
NDC80	YIL144W	PEX14	P53112	341 aa		3.96	□□□□□ -1.78
NDC80	YIL144W	PUS2	P53167	370 aa		3.96	□□□□□ -1.78
NDC80	YIL144W	HIS5	P07172	385 aa		3.95	□□□□□ -1.78
NDC80	YIL144W	TRX2	P22803	104 aa	Known RBP	3.95	□□□□□ -1.78
NDC80	YIL144W	LIP5	P32875	414 aa		3.95	□□□□□ -1.78
NDC80	YIL144W	ATG19	P35193	415 aa		3.95	□□□□□ -1.78
NDC80	YIL144W	MIP6	P38760	659 aa	Known RBP	3.95	□□□□□ -1.78
NDC80	YIL144W	YHR078W	P38799	552 aa		3.95	□□□□□ -1.78
NDC80	YIL144W	PSP2	P50109	593 aa	Known RBP	3.95	□□□□□ -1.78
NDC80	YIL144W	PCL10	P53124	433 aa		3.95	□□□□□ -1.78
NDC80	YIL144W	SNO2	P53823	222 aa		3.95	□□□□□ -1.78
NDC80	YIL144W	CEF1	Q03654	590 aa	Predicted RBP	3.95	□□□□□ -1.78
NDC80	YIL144W	MUS81	Q04149	632 aa	Predicted RBP	3.95	□□□□□ -1.78
NDC80	YIL144W	TRE2	Q08693	809 aa		3.95	□□□□□ -1.78
NDC80	YIL144W	YOR378W	Q08902	515 aa		3.95	□□□□□ -1.78
NDC80	YIL144W	SEC21	P32074	935 aa	Known RBP	3.94	□□□□□ -1.78
NDC80	YIL144W	TDA3	P38758	523 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	SAK1	P38990	1142 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	YFL052W	P43551	465 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	YAP6	Q03935	383 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	HFI1	Q12060	488 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	MPD2	Q99316	277 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	VHR1	P40522	640 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	PFA3	P42836	336 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	MRPS35	P53292	345 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	GCN5	Q03330	439 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	GPB1	Q08886	897 aa		3.94	□□□□□ -1.78
NDC80	YIL144W	ATP12	P22135	325 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	CDC20	P26309	610 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	MFT1	P33441	392 aa	Known RBP	3.93	□□□□□ -1.78
NDC80	YIL144W	SEG2	P34250	1132 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	OAF3	P36023	863 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	MAL31	P38156	614 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	YJR039W	P47107	1121 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	CWC22	P53333	577 aa	Known RBP	3.93	□□□□□ -1.78
NDC80	YIL144W	SLX4	Q12098	748 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	AEP2	P22136	580 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	DID4	P36108	232 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	AKL1	P38080	1108 aa	Known RBP	3.93	□□□□□ -1.78
NDC80	YIL144W	ASI2	P53895	289 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	KCS1	Q12494	1050 aa		3.93	□□□□□ -1.78
NDC80	YIL144W	SED4	P25365	1065 aa		3.92	□□□□□ -1.78
NDC80	YIL144W	HEM12	P32347	362 aa	Predicted RBP	3.92	□□□□□ -1.78
NDC80	YIL144W	NFU1	P32860	256 aa		3.92	□□□□□ -1.78
NDC80	YIL144W	BEM4	P39011	633 aa		3.92	□□□□□ -1.78
NDC80	YIL144W	ENT2	Q05785	613 aa		3.92	□□□□□ -1.78
NDC80	YIL144W	CDA2	Q06703	312 aa		3.92	□□□□□ -1.78
NDC80	YIL144W	NPC2	Q12408	173 aa		3.92	□□□□□ -1.78
NDC80	YIL144W	LAS17	Q12446	633 aa		3.92	□□□□□ -1.78
NDC80	YIL144W	APM4	Q99186	491 aa		3.92	□□□□□ -1.78
NDC80	YIL144W	CDC26	P14724	124 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	BIT2	P38346	545 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	PBP1	P53297	722 aa	Known RBP	3.91	□□□□□ -1.78
NDC80	YIL144W	ECM38	Q05902	660 aa	Predicted RBP	3.91	□□□□□ -1.78
NDC80	YIL144W	NOP12	Q08208	459 aa	Known RBP	3.91	□□□□□ -1.78
NDC80	YIL144W	YPL277C	Q08989	487 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	TMA7	Q3E764	64 aa	Known RBP	3.91	□□□□□ -1.78
NDC80	YIL144W	RPS13	P05756	151 aa	Known RBP	3.91	□□□□□ -1.78
NDC80	YIL144W	PIF1	P07271	859 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	HIR1	P32479	840 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	RPS0A	P32905	252 aa	Known RBP	3.91	□□□□□ -1.78
NDC80	YIL144W	YHR202W	P38887	602 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	PLB1	P39105	664 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	ESF2	P53743	316 aa	Known RBP	3.91	□□□□□ -1.78
NDC80	YIL144W	YHM2	Q04013	314 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	ACK1	Q07622	623 aa	Predicted RBP	3.91	□□□□□ -1.78
NDC80	YIL144W	RMP1	Q12530	201 aa		3.91	□□□□□ -1.78
NDC80	YIL144W	SWI6	P09959	803 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	GLN4	P13188	809 aa	Known RBP	3.9	□□□□□ -1.78
NDC80	YIL144W	SEC65	P29478	273 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	LST4	P34239	828 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	PEA2	P40091	420 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	GID8	P40208	455 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	MTR3	P48240	250 aa	Predicted RBP	3.9	□□□□□ -1.78
NDC80	YIL144W	ERG5	P54781	538 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	YLR224W	Q05947	369 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	YLR407W	Q06070	228 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	RXT3	Q07458	294 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	ERP4	Q12450	207 aa		3.9	□□□□□ -1.78
NDC80	YIL144W	SST2	P11972	698 aa	Known RBP	3.9	□□□□□ -1.79
NDC80	YIL144W	ADE2	P21264	571 aa	Known RBP	3.9	□□□□□ -1.79
NDC80	YIL144W	KAR4	P25583	335 aa		3.9	□□□□□ -1.79
NDC80	YIL144W	RPN12	P32496	274 aa		3.9	□□□□□ -1.79
NDC80	YIL144W	AIM3	P38266	947 aa	Known RBP	3.9	□□□□□ -1.79
NDC80	YIL144W	PZF1	P39933	429 aa		3.9	□□□□□ -1.79
NDC80	YIL144W	RCR2	Q03446	210 aa	Known RBP	3.9	□□□□□ -1.79
NDC80	YIL144W	SKY1	Q03656	742 aa		3.9	□□□□□ -1.79
NDC80	YIL144W	YPS7	Q06325	596 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms