RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C GVP36P40531 326 aaKnown RBP9.16□□□□□ -0.94
SSL2YIL143C CLA4P48562 842 aa9.16□□□□□ -0.94
SSL2YIL143C VPS4P52917 437 aa9.16□□□□□ -0.94
SSL2YIL143C GPN2Q08726 347 aaPredicted RBP9.16□□□□□ -0.94
SSL2YIL143C LAP2Q10740 671 aa9.16□□□□□ -0.94
SSL2YIL143C SRD1P09007 221 aa9.15□□□□□ -0.94
SSL2YIL143C RPN3P40016 523 aaKnown RBP9.15□□□□□ -0.94
SSL2YIL143C YMR134WP40207 237 aa9.15□□□□□ -0.94
SSL2YIL143C YGR111WP53265 400 aa9.15□□□□□ -0.94
SSL2YIL143C GTB1Q04924 702 aa9.15□□□□□ -0.94
SSL2YIL143C ACK1Q07622 623 aaPredicted RBP9.15□□□□□ -0.94
SSL2YIL143C CDC53Q12018 815 aaKnown RBP9.15□□□□□ -0.94
SSL2YIL143C YDL206WQ12424 762 aa9.15□□□□□ -0.94
SSL2YIL143C RTP1Q12751 981 aa9.15□□□□□ -0.94
SSL2YIL143C MRPL25P23369 157 aa9.15□□□□□ -0.94
SSL2YIL143C RFC3P38629 340 aa9.15□□□□□ -0.94
SSL2YIL143C OAF1P39720 1047 aaPredicted RBP9.15□□□□□ -0.94
SSL2YIL143C ERO1Q03103 563 aa9.15□□□□□ -0.94
SSL2YIL143C ATG16Q03818 150 aa9.15□□□□□ -0.94
SSL2YIL143C RRD2Q12461 358 aa9.15□□□□□ -0.94
SSL2YIL143C CST26P38226 397 aa9.14□□□□□ -0.95
SSL2YIL143C ASG1P40467 964 aa9.14□□□□□ -0.95
SSL2YIL143C ALA1P40825 983 aaKnown RBP9.14□□□□□ -0.95
SSL2YIL143C TFG1P41895 735 aaPredicted RBP9.14□□□□□ -0.95
SSL2YIL143C VPS70P47161 811 aa9.14□□□□□ -0.95
SSL2YIL143C HFD1Q04458 532 aa9.14□□□□□ -0.95
SSL2YIL143C RPL24AP04449 155 aaKnown RBP9.14□□□□□ -0.95
SSL2YIL143C SIN4P32259 974 aa9.14□□□□□ -0.95
SSL2YIL143C TRM2P33753 639 aa9.14□□□□□ -0.95
SSL2YIL143C UBP13P38187 747 aa9.14□□□□□ -0.95
SSL2YIL143C YBL028CP38202 106 aa9.14□□□□□ -0.95
SSL2YIL143C SEC27P41811 889 aaKnown RBP9.14□□□□□ -0.95
SSL2YIL143C RSM26P47141 266 aa9.14□□□□□ -0.95
SSL2YIL143C TAF6P53040 516 aa9.14□□□□□ -0.95
SSL2YIL143C UFO1Q04511 668 aa9.14□□□□□ -0.95
SSL2YIL143C YDR222WQ04925 415 aa9.14□□□□□ -0.95
SSL2YIL143C YPT6Q99260 215 aa9.14□□□□□ -0.95
SSL2YIL143C YML002WP0CF17 737 aa9.13□□□□□ -0.95
SSL2YIL143C ESS1P22696 170 aa9.13□□□□□ -0.95
SSL2YIL143C MGT1P26188 188 aa9.13□□□□□ -0.95
SSL2YIL143C TPS2P31688 896 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C PUP2P32379 260 aa9.13□□□□□ -0.95
SSL2YIL143C CBF2P32504 956 aa9.13□□□□□ -0.95
SSL2YIL143C MRE11P32829 692 aa9.13□□□□□ -0.95
SSL2YIL143C PGM1P33401 570 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C YTA12P40341 825 aa9.13□□□□□ -0.95
SSL2YIL143C MCM6P53091 1017 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C UBP2Q01476 1272 aa9.13□□□□□ -0.95
SSL2YIL143C SVL3Q03088 825 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C YMR027WQ04371 470 aa9.13□□□□□ -0.95
SSL2YIL143C TDA5Q06417 326 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C RKM4Q12504 494 aa9.13□□□□□ -0.95
SSL2YIL143C PRP22P24384 1145 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C SPS22P25380 463 aa9.13□□□□□ -0.95
SSL2YIL143C POP4P38336 279 aa9.13□□□□□ -0.95
SSL2YIL143C ERC1P38767 581 aa9.13□□□□□ -0.95
SSL2YIL143C ARI1P53111 347 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C NOG2P53742 486 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C PUF3Q07807 879 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
SSL2YIL143C ABP140Q08641 628 aaKnown RBP9.13□□□□□ -0.95
SSL2YIL143C DAL2P25335 343 aa9.12□□□□□ -0.95
SSL2YIL143C RPC19P28000 142 aaKnown RBP9.12□□□□□ -0.95
SSL2YIL143C LIN1P38852 340 aaPredicted RBP9.12□□□□□ -0.95
SSL2YIL143C MKT1P40850 830 aaKnown RBP9.12□□□□□ -0.95
SSL2YIL143C COG6P53959 839 aa9.12□□□□□ -0.95
SSL2YIL143C CEF1Q03654 590 aaPredicted RBP9.12□□□□□ -0.95
SSL2YIL143C VHS3Q08438 674 aa9.12□□□□□ -0.95
SSL2YIL143C ADP1P25371 1049 aa9.12□□□□□ -0.95
SSL2YIL143C GPD2P41911 440 aaKnown RBP9.12□□□□□ -0.95
SSL2YIL143C TAN1P53072 289 aaPredicted RBP9.12□□□□□ -0.95
SSL2YIL143C PPM1Q04081 328 aa9.12□□□□□ -0.95
SSL2YIL143C TDA11P38854 504 aa9.11□□□□□ -0.95
SSL2YIL143C SPC97P38863 823 aa9.11□□□□□ -0.95
SSL2YIL143C SIP5P40210 489 aaKnown RBP9.11□□□□□ -0.95
SSL2YIL143C ALG5P40350 334 aa9.11□□□□□ -0.95
SSL2YIL143C HOP2P53187 214 aa9.11□□□□□ -0.95
SSL2YIL143C YDL121CQ07541 149 aa9.11□□□□□ -0.95
SSL2YIL143C WHI4Q07655 649 aaKnown RBP9.11□□□□□ -0.95
SSL2YIL143C TRM11Q12463 433 aa9.11□□□□□ -0.95
SSL2YIL143C MUD1P32605 298 aaKnown RBP9.11□□□□□ -0.95
SSL2YIL143C DUG2P38149 878 aa9.11□□□□□ -0.95
SSL2YIL143C RNR4P49723 345 aaKnown RBP9.11□□□□□ -0.95
SSL2YIL143C YNL011CP53980 444 aa9.11□□□□□ -0.95
SSL2YIL143C ALD6P54115 500 aaKnown RBP9.11□□□□□ -0.95
SSL2YIL143C RRG1Q12167 365 aaPredicted RBP9.11□□□□□ -0.95
SSL2YIL143C GRX6Q12438 231 aa9.11□□□□□ -0.95
SSL2YIL143C PYC2P32327 1180 aaKnown RBP9.1□□□□□ -0.95
SSL2YIL143C SUV3P32580 737 aa9.1□□□□□ -0.95
SSL2YIL143C UBP11P36026 717 aa9.1□□□□□ -0.95
SSL2YIL143C PFK26P40433 827 aaKnown RBP9.1□□□□□ -0.95
SSL2YIL143C COS6P53344 381 aa9.1□□□□□ -0.95
SSL2YIL143C DUS4Q06063 367 aa9.1□□□□□ -0.95
SSL2YIL143C PHR1P05066 565 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
SSL2YIL143C AEP2P22136 580 aa9.1□□□□□ -0.95
SSL2YIL143C AAD3P25612 363 aa9.1□□□□□ -0.95
SSL2YIL143C YSC83P32792 385 aa9.1□□□□□ -0.95
SSL2YIL143C GUA1P38625 525 aaKnown RBP9.1□□□□□ -0.95
SSL2YIL143C YML6P51998 286 aa9.1□□□□□ -0.95
SSL2YIL143C USE1P53146 245 aa9.1□□□□□ -0.95
SSL2YIL143C PXR1P53335 271 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms