RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	RNT1	Q02555	471 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	SLU7	Q02775	382 aa	Known RBP	4.01	□□□□□ -1.77
VHR1	YIL056W	ASM4	Q05166	528 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	ATG33	Q06485	197 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	PNS1	Q12412	539 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	YLR149C	Q99296	730 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	HMG1	P12683	1054 aa		4	□□□□□ -1.77
VHR1	YIL056W	PRP4	P20053	465 aa	Known RBP	4	□□□□□ -1.77
VHR1	YIL056W	PCL2	P25693	308 aa		4	□□□□□ -1.77
VHR1	YIL056W	HIS7	P33734	552 aa	Known RBP	4	□□□□□ -1.77
VHR1	YIL056W	CRP1	P38845	465 aa	Known RBP	4	□□□□□ -1.77
VHR1	YIL056W	MET13	P53128	600 aa		4	□□□□□ -1.77
VHR1	YIL056W	COX18	P53239	316 aa		4	□□□□□ -1.77
VHR1	YIL056W	YJR142W	P47173	342 aa		3.99	□□□□□ -1.77
VHR1	YIL056W	AMA1	P50082	593 aa		3.99	□□□□□ -1.77
VHR1	YIL056W	YMR206W	Q03695	313 aa		3.99	□□□□□ -1.77
VHR1	YIL056W	LAS17	Q12446	633 aa		3.99	□□□□□ -1.77
VHR1	YIL056W	ALG7	P07286	448 aa		3.99	□□□□□ -1.77
VHR1	YIL056W	YIR042C	P40586	236 aa		3.99	□□□□□ -1.77
VHR1	YIL056W	GPD1	Q00055	391 aa	Known RBP	3.99	□□□□□ -1.77
VHR1	YIL056W	KIN4	Q01919	800 aa		3.99	□□□□□ -1.77
VHR1	YIL056W	PUS9	Q12069	462 aa		3.99	□□□□□ -1.77
VHR1	YIL056W	PCM1	P38628	557 aa	Known RBP	3.98	□□□□□ -1.77
VHR1	YIL056W	TDA3	P38758	523 aa		3.98	□□□□□ -1.77
VHR1	YIL056W	PCL10	P53124	433 aa		3.98	□□□□□ -1.77
VHR1	YIL056W	THI73	Q07904	523 aa		3.98	□□□□□ -1.77
VHR1	YIL056W	YLR040C	Q07988	224 aa		3.98	□□□□□ -1.77
VHR1	YIL056W	YOL073C	Q08232	322 aa		3.98	□□□□□ -1.77
VHR1	YIL056W	FRE5	Q08908	694 aa		3.98	□□□□□ -1.77
VHR1	YIL056W	TGL5	Q12043	749 aa		3.98	□□□□□ -1.77
VHR1	YIL056W	PRP19	P32523	503 aa	Known RBP	3.97	□□□□□ -1.77
VHR1	YIL056W	SPC42	P36094	363 aa		3.97	□□□□□ -1.77
VHR1	YIL056W	PMT3	P47190	753 aa		3.97	□□□□□ -1.77
VHR1	YIL056W	CTK1	Q03957	528 aa	Known RBP	3.97	□□□□□ -1.77
VHR1	YIL056W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
VHR1	YIL056W	TYS1	P36421	394 aa	Known RBP	3.97	□□□□□ -1.77
VHR1	YIL056W	SIC1	P38634	284 aa		3.97	□□□□□ -1.77
VHR1	YIL056W	MIP6	P38760	659 aa	Known RBP	3.97	□□□□□ -1.77
VHR1	YIL056W	MRPS35	P53292	345 aa		3.97	□□□□□ -1.77
VHR1	YIL056W	YLR001C	Q07895	862 aa		3.97	□□□□□ -1.77
VHR1	YIL056W	YKR018C	P36114	725 aa		3.96	□□□□□ -1.78
VHR1	YIL056W	TRZ1	P36159	838 aa	Predicted RBP	3.96	□□□□□ -1.78
VHR1	YIL056W	TIM44	Q01852	431 aa		3.96	□□□□□ -1.78
VHR1	YIL056W	SGO1	Q08490	590 aa		3.96	□□□□□ -1.78
VHR1	YIL056W	PPR1	P07272	904 aa	Predicted RBP	3.95	□□□□□ -1.78
VHR1	YIL056W	APN2	P38207	520 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	DAS1	P47005	663 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	UBA2	P52488	636 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	FAP7	Q12055	197 aa	Predicted RBP	3.95	□□□□□ -1.78
VHR1	YIL056W	LAT1	P12695	482 aa	Known RBP	3.95	□□□□□ -1.78
VHR1	YIL056W	ADE2	P21264	571 aa	Known RBP	3.95	□□□□□ -1.78
VHR1	YIL056W	CCR4	P31384	837 aa	Known RBP	3.95	□□□□□ -1.78
VHR1	YIL056W	MNN4	P36044	1178 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	MGS1	P40151	587 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	YGR237C	P50089	785 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	ERG5	P54781	538 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	REC102	Q02721	264 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	UME1	Q03010	460 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	TRM13	Q12383	476 aa		3.95	□□□□□ -1.78
VHR1	YIL056W	SEC15	P22224	910 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	MIH1	P23748	554 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	MVD1	P32377	396 aa	Known RBP	3.94	□□□□□ -1.78
VHR1	YIL056W	APL2	P36000	726 aa	Predicted RBP	3.94	□□□□□ -1.78
VHR1	YIL056W	MAL31	P38156	614 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	REV7	P38927	245 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	CKB2	P38930	258 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	YGR153W	P48238	217 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	YNR029C	P53729	429 aa	Known RBP	3.94	□□□□□ -1.78
VHR1	YIL056W	TEX1	P53851	422 aa	Known RBP	3.94	□□□□□ -1.78
VHR1	YIL056W	DOS2	P54858	310 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	MCM21	Q06675	368 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	DIA2	Q08496	732 aa	Predicted RBP	3.94	□□□□□ -1.78
VHR1	YIL056W	ATG11	Q12527	1178 aa		3.94	□□□□□ -1.78
VHR1	YIL056W	ECM1	P39715	212 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	SET2	P46995	733 aa	Known RBP	3.93	□□□□□ -1.78
VHR1	YIL056W	YJR096W	P47137	282 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	BUL1	P48524	976 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	ARG5,6	Q01217	863 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	IOC4	Q04213	475 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	HFD1	Q04458	532 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	ADY4	Q05955	493 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	ISA1	Q07821	250 aa	Predicted RBP	3.93	□□□□□ -1.78
VHR1	YIL056W	IRC13	Q08630	104 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	ACF2	Q12168	779 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	PYC1	P11154	1178 aa	Known RBP	3.93	□□□□□ -1.78
VHR1	YIL056W	PPS1	P38148	807 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	CBR1	P38626	284 aa	Known RBP	3.93	□□□□□ -1.78
VHR1	YIL056W	YHR112C	P38716	378 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	YJL163C	P46996	555 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	GPR1	Q12361	961 aa		3.93	□□□□□ -1.78
VHR1	YIL056W	YHR202W	P38887	602 aa		3.92	□□□□□ -1.78
VHR1	YIL056W	CTF4	Q01454	927 aa		3.92	□□□□□ -1.78
VHR1	YIL056W	YMR210W	Q03649	449 aa		3.92	□□□□□ -1.78
VHR1	YIL056W	HBT1	Q07653	1046 aa	Known RBP	3.92	□□□□□ -1.78
VHR1	YIL056W	YBR053C	P38235	358 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	PCL5	P38794	229 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	CCT3	P39077	534 aa	Known RBP	3.91	□□□□□ -1.78
VHR1	YIL056W	RET2	P43621	546 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	YGL081W	P53156	320 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	MTL1	P53214	551 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms