RNA–Protein interactions for RNA: YGL113W

SLD3, Transcript of Protein involved in the initiation of DNA replication, yeastyeast

Gene SLD3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD3YGL113W MDM10P18409 493 aa1.93□□□□□ -2.1
SLD3YGL113W ERG6P25087 383 aaKnown RBP1.93□□□□□ -2.1
SLD3YGL113W ADY2P25613 283 aa1.93□□□□□ -2.1
SLD3YGL113W YHR112CP38716 378 aa1.93□□□□□ -2.1
SLD3YGL113W FMO1P38866 432 aa1.93□□□□□ -2.1
SLD3YGL113W SHR5P41912 237 aa1.93□□□□□ -2.1
SLD3YGL113W MTR3P48240 250 aaPredicted RBP1.93□□□□□ -2.1
SLD3YGL113W HSV2P50079 448 aaPredicted RBP1.93□□□□□ -2.1
SLD3YGL113W IMO32P53219 342 aa1.93□□□□□ -2.1
SLD3YGL113W TAF3Q12297 353 aa1.93□□□□□ -2.1
SLD3YGL113W DIF1O13577 133 aa1.92□□□□□ -2.1
SLD3YGL113W TUB1P09733 447 aaKnown RBP1.92□□□□□ -2.1
SLD3YGL113W ADE2P21264 571 aaKnown RBP1.92□□□□□ -2.1
SLD3YGL113W YBR259WP38338 688 aa1.92□□□□□ -2.1
SLD3YGL113W PAN2P53010 1115 aaPredicted RBP1.92□□□□□ -2.1
SLD3YGL113W SSL2Q00578 843 aa1.92□□□□□ -2.1
SLD3YGL113W ARO10Q06408 635 aa1.92□□□□□ -2.1
SLD3YGL113W ATG11Q12527 1178 aa1.92□□□□□ -2.1
SLD3YGL113W YLR149CQ99296 730 aa1.92□□□□□ -2.1
SLD3YGL113W HRP1Q99383 534 aaKnown RBP1.92□□□□□ -2.1
SLD3YGL113W Q0142Q9ZZW4 58 aa1.92□□□□□ -2.1
SLD3YGL113W ERR1P0CX10 437 aa1.91□□□□□ -2.1
SLD3YGL113W ERR2P0CX11 437 aa1.91□□□□□ -2.1
SLD3YGL113W MIH1P23748 554 aa1.91□□□□□ -2.1
SLD3YGL113W SFB3P38810 929 aa1.91□□□□□ -2.1
SLD3YGL113W YJL206CP39529 758 aa1.91□□□□□ -2.1
SLD3YGL113W GAD1Q04792 585 aa1.91□□□□□ -2.1
SLD3YGL113W PYC1P11154 1178 aaKnown RBP1.91□□□□□ -2.1
SLD3YGL113W DMC1P25453 334 aa1.91□□□□□ -2.1
SLD3YGL113W CCT3P39077 534 aaKnown RBP1.91□□□□□ -2.1
SLD3YGL113W ECM1P39715 212 aa1.91□□□□□ -2.1
SLD3YGL113W ALY2P47029 1046 aa1.91□□□□□ -2.1
SLD3YGL113W PRP31P49704 494 aaPredicted RBP1.91□□□□□ -2.1
SLD3YGL113W FHN1P53279 174 aa1.91□□□□□ -2.1
SLD3YGL113W MLH3Q12083 715 aa1.91□□□□□ -2.1
SLD3YGL113W SPO11P23179 398 aa1.9□□□□□ -2.11
SLD3YGL113W MTC2P34246 357 aa1.9□□□□□ -2.11
SLD3YGL113W MCD4P36051 919 aa1.9□□□□□ -2.11
SLD3YGL113W GDH3P39708 457 aa1.9□□□□□ -2.11
SLD3YGL113W GET2P40056 285 aa1.9□□□□□ -2.11
SLD3YGL113W NDC80P40460 691 aa1.9□□□□□ -2.11
SLD3YGL113W ZDS1P50111 915 aaKnown RBP1.9□□□□□ -2.11
SLD3YGL113W YBP2P53169 641 aa1.9□□□□□ -2.11
SLD3YGL113W ORC1P54784 914 aaPredicted RBP1.9□□□□□ -2.11
SLD3YGL113W ARG5,6Q01217 863 aa1.9□□□□□ -2.11
SLD3YGL113W NSE3Q05541 303 aa1.9□□□□□ -2.11
SLD3YGL113W YKL033W-AQ86ZR7 236 aa1.9□□□□□ -2.11
SLD3YGL113W GAL11P19659 1081 aa1.9□□□□□ -2.11
SLD3YGL113W MVD1P32377 396 aaKnown RBP1.9□□□□□ -2.11
SLD3YGL113W PHO11P35842 467 aa1.9□□□□□ -2.11
SLD3YGL113W PHO12P38693 467 aa1.9□□□□□ -2.11
SLD3YGL113W REV7P38927 245 aa1.9□□□□□ -2.11
SLD3YGL113W NUP60P39705 539 aa1.9□□□□□ -2.11
SLD3YGL113W YIL166CP40445 542 aa1.9□□□□□ -2.11
SLD3YGL113W COQ11Q05892 277 aa1.9□□□□□ -2.11
SLD3YGL113W THI7Q05998 598 aa1.9□□□□□ -2.11
SLD3YGL113W APL2P36000 726 aaPredicted RBP1.89□□□□□ -2.11
SLD3YGL113W YKR051WP36142 418 aa1.89□□□□□ -2.11
SLD3YGL113W MIP6P38760 659 aaKnown RBP1.89□□□□□ -2.11
SLD3YGL113W BNA2P47125 453 aa1.89□□□□□ -2.11
SLD3YGL113W APM1Q00776 475 aaPredicted RBP1.89□□□□□ -2.11
SLD3YGL113W LEE1Q02799 301 aaKnown RBP1.89□□□□□ -2.11
SLD3YGL113W HMO1Q03973 246 aaKnown RBP1.89□□□□□ -2.11
SLD3YGL113W AFT2Q08957 416 aa1.89□□□□□ -2.11
SLD3YGL113W CDC53Q12018 815 aaKnown RBP1.89□□□□□ -2.11
SLD3YGL113W YNL162W-AQ3E7A8 72 aa1.89□□□□□ -2.11
SLD3YGL113W CDC9P04819 755 aa1.88□□□□□ -2.11
SLD3YGL113W THR1P17423 357 aaKnown RBP1.88□□□□□ -2.11
SLD3YGL113W MEF1P25039 761 aa1.88□□□□□ -2.11
SLD3YGL113W SET3P36124 751 aa1.88□□□□□ -2.11
SLD3YGL113W NNF1P47149 201 aa1.88□□□□□ -2.11
SLD3YGL113W YAP1802P53309 568 aa1.88□□□□□ -2.11
SLD3YGL113W ARP4P80428 489 aa1.88□□□□□ -2.11
SLD3YGL113W CTK1Q03957 528 aaKnown RBP1.88□□□□□ -2.11
SLD3YGL113W ILV6P25605 309 aaKnown RBP1.88□□□□□ -2.11
SLD3YGL113W TIM23P32897 222 aa1.88□□□□□ -2.11
SLD3YGL113W BDH2P39713 417 aa1.88□□□□□ -2.11
SLD3YGL113W YEL020CP39994 560 aa1.88□□□□□ -2.11
SLD3YGL113W GID8P40208 455 aa1.88□□□□□ -2.11
SLD3YGL113W MCM21Q06675 368 aa1.88□□□□□ -2.11
SLD3YGL113W USV1Q12132 391 aa1.88□□□□□ -2.11
SLD3YGL113W RNR1P21524 888 aaKnown RBP1.87□□□□□ -2.11
SLD3YGL113W GLG1P36143 616 aa1.87□□□□□ -2.11
SLD3YGL113W TRZ1P36159 838 aaPredicted RBP1.87□□□□□ -2.11
SLD3YGL113W YNL195CP40168 261 aa1.87□□□□□ -2.11
SLD3YGL113W OSW7P43611 510 aa1.87□□□□□ -2.11
SLD3YGL113W CTR1P49573 406 aa1.87□□□□□ -2.11
SLD3YGL113W ATG4P53867 494 aa1.87□□□□□ -2.11
SLD3YGL113W ORC4P54791 529 aa1.87□□□□□ -2.11
SLD3YGL113W HOF1Q05080 669 aa1.87□□□□□ -2.11
SLD3YGL113W STI1P15705 589 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
SLD3YGL113W APT2P36973 181 aa1.86□□□□□ -2.11
SLD3YGL113W ARG2P40360 574 aa1.86□□□□□ -2.11
SLD3YGL113W YFL052WP43551 465 aa1.86□□□□□ -2.11
SLD3YGL113W NOP9P47077 666 aaKnown RBP1.86□□□□□ -2.11
SLD3YGL113W MRI1Q06489 411 aaKnown RBP1.86□□□□□ -2.11
SLD3YGL113W OSW1Q08692 278 aa1.86□□□□□ -2.11
SLD3YGL113W MDM12Q92328 271 aa1.86□□□□□ -2.11
SLD3YGL113W ECM3Q99252 613 aa1.86□□□□□ -2.11
SLD3YGL113W AIM44Q99299 758 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms