RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C SNO2P53823 222 aa1.57□□□□□ -2.16
SEC3YER008C UME1Q03010 460 aa1.57□□□□□ -2.16
SEC3YER008C REH1Q06709 432 aa1.57□□□□□ -2.16
SEC3YER008C SNF2P22082 1703 aa1.57□□□□□ -2.16
SEC3YER008C CDC9P04819 755 aa1.56□□□□□ -2.16
SEC3YER008C SST2P11972 698 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C PNT1P38969 423 aa1.56□□□□□ -2.16
SEC3YER008C NPY1P53164 384 aa1.56□□□□□ -2.16
SEC3YER008C YGR021WP53212 290 aa1.56□□□□□ -2.16
SEC3YER008C UTP8P53276 713 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C LCD1Q04377 747 aa1.56□□□□□ -2.16
SEC3YER008C YLR001CQ07895 862 aa1.56□□□□□ -2.16
SEC3YER008C YOL087CQ99247 1116 aa1.56□□□□□ -2.16
SEC3YER008C RPP2AP05319 106 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C KCC4P25389 1037 aa1.56□□□□□ -2.16
SEC3YER008C YBR071WP38243 211 aa1.56□□□□□ -2.16
SEC3YER008C HOS4P40480 1083 aa1.56□□□□□ -2.16
SEC3YER008C OYE3P41816 400 aaPredicted RBP1.56□□□□□ -2.16
SEC3YER008C RAI1P53063 387 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C MET13P53128 600 aa1.56□□□□□ -2.16
SEC3YER008C DAM1P53267 343 aa1.56□□□□□ -2.16
SEC3YER008C MET14Q02196 202 aa1.56□□□□□ -2.16
SEC3YER008C SGO1Q08490 590 aa1.56□□□□□ -2.16
SEC3YER008C MET7Q08645 548 aa1.56□□□□□ -2.16
SEC3YER008C YPL277CQ08989 487 aa1.56□□□□□ -2.16
SEC3YER008C SWM1Q12379 170 aa1.56□□□□□ -2.16
SEC3YER008C DBP2P24783 546 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C RPN12P32496 274 aa1.56□□□□□ -2.16
SEC3YER008C MAL31P38156 614 aa1.56□□□□□ -2.16
SEC3YER008C AVT1P47082 602 aa1.56□□□□□ -2.16
SEC3YER008C HFM1P51979 1187 aa1.56□□□□□ -2.16
SEC3YER008C SPC105P53148 917 aa1.56□□□□□ -2.16
SEC3YER008C RXT3Q07458 294 aa1.56□□□□□ -2.16
SEC3YER008C MDM38Q08179 573 aa1.56□□□□□ -2.16
SEC3YER008C SEC18P18759 758 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C CYS3P31373 394 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C DBF20P32328 564 aa1.56□□□□□ -2.16
SEC3YER008C NGG1P32494 702 aa1.56□□□□□ -2.16
SEC3YER008C HBS1P32769 611 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C RPN3P40016 523 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C NOG2P53742 486 aaKnown RBP1.56□□□□□ -2.16
SEC3YER008C HIM1Q06674 414 aa1.56□□□□□ -2.16
SEC3YER008C YSP2Q06681 1438 aa1.55□□□□□ -2.16
SEC3YER008C BCK1Q01389 1478 aa1.55□□□□□ -2.16
SEC3YER008C PGI1P12709 554 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C ECM32P32644 1121 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C PET10P36139 283 aa1.55□□□□□ -2.16
SEC3YER008C SET5P38890 526 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C SIP5P40210 489 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C YJR096WP47137 282 aa1.55□□□□□ -2.16
SEC3YER008C YGR012WP53206 393 aa1.55□□□□□ -2.16
SEC3YER008C GUD1Q07729 489 aa1.55□□□□□ -2.16
SEC3YER008C PSR1Q07800 427 aa1.55□□□□□ -2.16
SEC3YER008C DFG16Q99234 619 aa1.55□□□□□ -2.16
SEC3YER008C URB1P34241 1764 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C DAL5P15365 543 aa1.55□□□□□ -2.16
SEC3YER008C PWP2P25635 923 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C RPD3P32561 433 aa1.55□□□□□ -2.16
SEC3YER008C AIM3P38266 947 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C RPT2P40327 437 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C NPL3Q01560 414 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SEC3YER008C MTQ2Q03920 221 aaPredicted RBP1.55□□□□□ -2.16
SEC3YER008C TMA64Q04600 565 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C SGD1Q06132 899 aa1.55□□□□□ -2.16
SEC3YER008C TMA10Q06177 86 aa1.55□□□□□ -2.16
SEC3YER008C YDR056CQ12025 205 aa1.55□□□□□ -2.16
SEC3YER008C ERP4Q12450 207 aa1.55□□□□□ -2.16
SEC3YER008C RPS21AP0C0V8 87 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C HOM3P10869 527 aa1.55□□□□□ -2.16
SEC3YER008C FUN30P31380 1131 aa1.55□□□□□ -2.16
SEC3YER008C PRP19P32523 503 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C STO1P34160 861 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C ORC4P54791 529 aa1.55□□□□□ -2.16
SEC3YER008C MDM1Q01846 1127 aa1.55□□□□□ -2.16
SEC3YER008C SRT1Q03175 343 aa1.55□□□□□ -2.16
SEC3YER008C TMA7Q3E764 64 aaKnown RBP1.55□□□□□ -2.16
SEC3YER008C CAT8P39113 1433 aa1.54□□□□□ -2.16
SEC3YER008C EMC1P25574 760 aa1.54□□□□□ -2.16
SEC3YER008C BEM3P32873 1128 aa1.54□□□□□ -2.16
SEC3YER008C HIS7P33734 552 aaKnown RBP1.54□□□□□ -2.16
SEC3YER008C TOD6P34219 525 aa1.54□□□□□ -2.16
SEC3YER008C APT2P36973 181 aa1.54□□□□□ -2.16
SEC3YER008C UBP6P43593 499 aaKnown RBP1.54□□□□□ -2.16
SEC3YER008C GUS1P46655 708 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
SEC3YER008C UBC9P50623 157 aaPredicted RBP1.54□□□□□ -2.16
SEC3YER008C PIP2P52960 996 aa1.54□□□□□ -2.16
SEC3YER008C MCM6P53091 1017 aaKnown RBP1.54□□□□□ -2.16
SEC3YER008C PRP43P53131 767 aaKnown RBP1.54□□□□□ -2.16
SEC3YER008C TPO1Q07824 586 aa1.54□□□□□ -2.16
SEC3YER008C RCL1Q08096 367 aaPredicted RBP1.54□□□□□ -2.16
SEC3YER008C GPB1Q08886 897 aa1.54□□□□□ -2.16
SEC3YER008C NKP1Q12493 238 aa1.54□□□□□ -2.16
SEC3YER008C RIM15P43565 1770 aa1.54□□□□□ -2.16
SEC3YER008C URA1P28272 314 aaPredicted RBP1.54□□□□□ -2.16
SEC3YER008C DPH2P32461 534 aa1.54□□□□□ -2.16
SEC3YER008C TYE7P33122 291 aaPredicted RBP1.54□□□□□ -2.16
SEC3YER008C TDA3P38758 523 aa1.54□□□□□ -2.16
SEC3YER008C SKN7P38889 622 aa1.54□□□□□ -2.16
SEC3YER008C SAK1P38990 1142 aa1.54□□□□□ -2.16
SEC3YER008C PEX7P39108 375 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms