RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W MMS21P38632 267 aa2.5□□□□□ -2.01
SPF1YEL031W YER137CP40083 148 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W SDS3P40505 327 aa2.5□□□□□ -2.01
SPF1YEL031W SER33P40510 469 aa2.5□□□□□ -2.01
SPF1YEL031W TRF5P48561 642 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W NMA2P53204 395 aa2.5□□□□□ -2.01
SPF1YEL031W ATP25Q03153 612 aa2.5□□□□□ -2.01
SPF1YEL031W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SPF1YEL031W NSE1Q07913 336 aa2.5□□□□□ -2.01
SPF1YEL031W UIP4Q08926 304 aa2.5□□□□□ -2.01
SPF1YEL031W YLR125WQ12138 136 aa2.5□□□□□ -2.01
SPF1YEL031W RRI2Q12348 645 aa2.5□□□□□ -2.01
SPF1YEL031W LSO2Q3E772 92 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W ENO1P00924 437 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W PEP5P12868 1029 aa2.5□□□□□ -2.01
SPF1YEL031W ATR1P13090 542 aa2.5□□□□□ -2.01
SPF1YEL031W SEC2P17065 759 aa2.5□□□□□ -2.01
SPF1YEL031W BAS1P22035 811 aa2.5□□□□□ -2.01
SPF1YEL031W SPS22P25380 463 aa2.5□□□□□ -2.01
SPF1YEL031W POL4P25615 582 aa2.5□□□□□ -2.01
SPF1YEL031W TRM2P33753 639 aa2.5□□□□□ -2.01
SPF1YEL031W PTH2P34222 208 aa2.5□□□□□ -2.01
SPF1YEL031W YBR062CP38239 180 aa2.5□□□□□ -2.01
SPF1YEL031W RFC3P38629 340 aa2.5□□□□□ -2.01
SPF1YEL031W AKR1P39010 764 aa2.5□□□□□ -2.01
SPF1YEL031W UBP9P39967 754 aa2.5□□□□□ -2.01
SPF1YEL031W IRC8P47046 822 aa2.5□□□□□ -2.01
SPF1YEL031W ORC3P54790 616 aa2.5□□□□□ -2.01
SPF1YEL031W UBP2Q01476 1272 aa2.5□□□□□ -2.01
SPF1YEL031W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SPF1YEL031W YMR226CQ05016 267 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W TSR2Q06672 205 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W DNL4Q08387 944 aaPredicted RBP2.5□□□□□ -2.01
SPF1YEL031W ERG12P07277 443 aa2.5□□□□□ -2.01
SPF1YEL031W EXO70P19658 623 aa2.5□□□□□ -2.01
SPF1YEL031W RPT5P33297 434 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W YKL063CP35725 167 aa2.5□□□□□ -2.01
SPF1YEL031W SHM1P37292 490 aaPredicted RBP2.5□□□□□ -2.01
SPF1YEL031W BOI1P38041 980 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W KTR4P38131 464 aa2.5□□□□□ -2.01
SPF1YEL031W GIP1P38229 639 aa2.5□□□□□ -2.01
SPF1YEL031W PIK1P39104 1066 aa2.5□□□□□ -2.01
SPF1YEL031W PHB1P40961 287 aa2.5□□□□□ -2.01
SPF1YEL031W LEM3P42838 414 aa2.5□□□□□ -2.01
SPF1YEL031W YNL320WP42840 284 aa2.5□□□□□ -2.01
SPF1YEL031W EMW1P42842 904 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W EMC2P47133 292 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W IMD4P50094 524 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W MSN5P52918 1224 aa2.5□□□□□ -2.01
SPF1YEL031W YNL058CP53947 316 aa2.5□□□□□ -2.01
SPF1YEL031W KTR5P53966 522 aaPredicted RBP2.5□□□□□ -2.01
SPF1YEL031W DAK1P54838 584 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W YMR187CQ03236 431 aa2.5□□□□□ -2.01
SPF1YEL031W FMP42Q04991 504 aa2.5□□□□□ -2.01
SPF1YEL031W TAF9Q05027 157 aa2.5□□□□□ -2.01
SPF1YEL031W SSQ1Q05931 657 aaPredicted RBP2.5□□□□□ -2.01
SPF1YEL031W ATG26Q06321 1198 aa2.5□□□□□ -2.01
SPF1YEL031W SPO75Q07798 868 aa2.5□□□□□ -2.01
SPF1YEL031W SIL1Q08199 421 aa2.5□□□□□ -2.01
SPF1YEL031W GYP1Q08484 637 aa2.5□□□□□ -2.01
SPF1YEL031W OSW1Q08692 278 aa2.5□□□□□ -2.01
SPF1YEL031W MDM20Q12387 796 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W NOT5Q12514 560 aaPredicted RBP2.5□□□□□ -2.01
SPF1YEL031W SNF1P06782 633 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W MSS116P15424 664 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W BRL1P38770 471 aa2.49□□□□□ -2.01
SPF1YEL031W ULP2P40537 1034 aaPredicted RBP2.49□□□□□ -2.01
SPF1YEL031W PAC11P40960 533 aa2.49□□□□□ -2.01
SPF1YEL031W IRC5P43610 853 aa2.49□□□□□ -2.01
SPF1YEL031W YJL007CP47080 104 aa2.49□□□□□ -2.01
SPF1YEL031W RFX1P48743 811 aa2.49□□□□□ -2.01
SPF1YEL031W RSM24Q03976 319 aa2.49□□□□□ -2.01
SPF1YEL031W RRP17Q04031 235 aaPredicted RBP2.49□□□□□ -2.01
SPF1YEL031W ADY3Q07732 790 aa2.49□□□□□ -2.01
SPF1YEL031W PSR2Q07949 397 aa2.49□□□□□ -2.01
SPF1YEL031W CDC53Q12018 815 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W HRT3Q12347 344 aa2.49□□□□□ -2.01
SPF1YEL031W CYB2P00175 591 aa2.49□□□□□ -2.01
SPF1YEL031W SUP45P12385 437 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W CLN3P13365 580 aa2.49□□□□□ -2.01
SPF1YEL031W PRP9P19736 530 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W RNR3P21672 869 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W UBA1P22515 1024 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W CSE1P33307 960 aa2.49□□□□□ -2.01
SPF1YEL031W AST1P35183 429 aa2.49□□□□□ -2.01
SPF1YEL031W KTR3P38130 404 aaPredicted RBP2.49□□□□□ -2.01
SPF1YEL031W ERP5P38819 212 aa2.49□□□□□ -2.01
SPF1YEL031W YEL023CP39992 682 aa2.49□□□□□ -2.01
SPF1YEL031W SNL1P40548 159 aa2.49□□□□□ -2.01
SPF1YEL031W THI6P41835 540 aa2.49□□□□□ -2.01
SPF1YEL031W CCT7P42943 550 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W TIM11P81449 96 aaPredicted RBP2.49□□□□□ -2.01
SPF1YEL031W YDR239CQ03780 787 aa2.49□□□□□ -2.01
SPF1YEL031W FIN1Q03898 291 aa2.49□□□□□ -2.01
SPF1YEL031W YLR031WQ07978 186 aa2.49□□□□□ -2.01
SPF1YEL031W CFT2Q12102 859 aaPredicted RBP2.49□□□□□ -2.01
SPF1YEL031W RPL24AP04449 155 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W SBP1P10080 294 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W SSA4P22202 642 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W KIN3P22209 435 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 77.1 ms