RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	VMA1	P17255	1071 aa	Known RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	NAN1	Q02931	896 aa	Known RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PDR15	YDR406W	TCP1	P12612	559 aa	Known RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	DAL1	P32375	460 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PDR15	YDR406W	JJJ3	P47138	172 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	PMT3	P47190	753 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	UBP15	P50101	1230 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	CDC53	Q12018	815 aa	Known RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	YEL076C-A	P0CX16	216 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	YLR464W	P0CX17	216 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	RDS2	P19541	446 aa	Known RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	YEL076C	P39971	216 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	RPC17	P47076	161 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	YGR016W	P53209	190 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	ORC4	P54791	529 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	SOV1	Q04748	898 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	MCM1	P11746	286 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	VPS3	P23643	1011 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	MSH2	P25847	964 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	KAP123	P40069	1113 aa	Known RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	TIM11	P81449	96 aa	Predicted RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	PEX29	Q03370	554 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	YLR297W	Q05899	129 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	SAM1	P10659	382 aa	Known RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	ISY1	P21374	235 aa	Predicted RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	SHM1	P37292	490 aa	Predicted RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	VAC8	P39968	578 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	BUD16	P39988	312 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	UTP7	P40055	554 aa	Known RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	SET2	P46995	733 aa	Known RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	NBP1	P52919	319 aa	Predicted RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	MCM6	P53091	1017 aa	Known RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	DIP5	P53388	608 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	TIM8	P57744	87 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	YML082W	Q04533	649 aa	Known RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	DAS2	Q12084	232 aa		4.88	□□□□□ -1.63
PDR15	YDR406W	DBP10	Q12389	995 aa	Known RBP	4.88	□□□□□ -1.63
PDR15	YDR406W	RPS9A	O13516	197 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PDR15	YDR406W	VMA2	P16140	517 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	STE11	P23561	717 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	KTR2	P33550	425 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	KDX1	P36005	433 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	YHR020W	P38708	688 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	HXT8	P40886	569 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	ALD6	P54115	500 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	PPR1	P07272	904 aa	Predicted RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	RAD57	P25301	460 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	CBF2	P32504	956 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	EDS1	P38073	919 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	PEA2	P40091	420 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	HOP2	P53187	214 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	MGR3	Q04472	501 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	YLR352W	Q06479	807 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	CSR1	Q06705	408 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	ADY3	Q07732	790 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	GRC3	Q07845	632 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	DAL7	P21826	554 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	MRPL25	P23369	157 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	DEP1	P31385	405 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	CRP1	P38845	465 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	HFM1	P51979	1187 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	PBP1	P53297	722 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	DSL1	P53847	754 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	ATG38	Q05789	226 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	YLR001C	Q07895	862 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	RIO1	Q12196	484 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	SEY1	Q99287	776 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	SUV3	P32580	737 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PDR15	YDR406W	SEG2	P34250	1132 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	NDT80	P38830	627 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	ESL1	P40456	1118 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	DSN1	P40568	576 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	RGD2	P43556	714 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	FUS2	Q05670	677 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	YLR326W	Q06170	240 aa	Known RBP	4.87	□□□□□ -1.63
PDR15	YDR406W	AVO1	Q08236	1176 aa		4.87	□□□□□ -1.63
PDR15	YDR406W	SNF1	P06782	633 aa	Known RBP	4.86	□□□□□ -1.63
PDR15	YDR406W	ARD1	P07347	238 aa	Predicted RBP	4.86	□□□□□ -1.63
PDR15	YDR406W	GFA1	P14742	717 aa	Known RBP	4.86	□□□□□ -1.63
PDR15	YDR406W	GPB2	P39717	880 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PDR15	YDR406W	CSR2	Q12734	1121 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	RAD1	P06777	1100 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	KAR3	P17119	729 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	CLB1	P24868	471 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	SMI1	P32566	505 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	UGA4	P32837	571 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	CCL1	P37366	393 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	CIN4	P39110	191 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	VHR2	P40041	505 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	MMF1	P40185	145 aa	Known RBP	4.86	□□□□□ -1.63
PDR15	YDR406W	FIS1	P40515	155 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	ULP2	P40537	1034 aa	Predicted RBP	4.86	□□□□□ -1.63
PDR15	YDR406W	MMM1	P41800	426 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	VTC4	P47075	721 aa		4.86	□□□□□ -1.63
PDR15	YDR406W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms