RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W SAF1P38352 637 aa2.37□□□□□ -2.03
SIR4YDR227W PCF11P39081 626 aaPredicted RBP2.37□□□□□ -2.03
SIR4YDR227W MBP1P39678 833 aa2.37□□□□□ -2.03
SIR4YDR227W NEO1P40527 1151 aa2.37□□□□□ -2.03
SIR4YDR227W BNA1P47096 177 aa2.37□□□□□ -2.03
SIR4YDR227W HST2P53686 357 aa2.37□□□□□ -2.03
SIR4YDR227W UBX4P54730 416 aa2.37□□□□□ -2.03
SIR4YDR227W YMR155WQ03795 547 aa2.37□□□□□ -2.03
SIR4YDR227W TRS120Q04183 1289 aa2.37□□□□□ -2.03
SIR4YDR227W DUS4Q06063 367 aa2.37□□□□□ -2.03
SIR4YDR227W RRP15Q06511 250 aaPredicted RBP2.37□□□□□ -2.03
SIR4YDR227W VAC14Q06708 880 aa2.37□□□□□ -2.03
SIR4YDR227W GUD1Q07729 489 aa2.37□□□□□ -2.03
SIR4YDR227W SPO21Q12411 609 aa2.37□□□□□ -2.03
SIR4YDR227W FRE6Q12473 712 aa2.37□□□□□ -2.03
SIR4YDR227W STE2D6VTK4 431 aa2.37□□□□□ -2.03
SIR4YDR227W TRL1P09880 827 aaKnown RBP2.37□□□□□ -2.03
SIR4YDR227W PHO87P25360 923 aa2.37□□□□□ -2.03
SIR4YDR227W HSL7P38274 827 aa2.37□□□□□ -2.03
SIR4YDR227W CAJ1P39101 391 aa2.37□□□□□ -2.03
SIR4YDR227W YEL025CP39991 1188 aa2.37□□□□□ -2.03
SIR4YDR227W MSB3P48566 633 aaPredicted RBP2.37□□□□□ -2.03
SIR4YDR227W SSL1Q04673 461 aaPredicted RBP2.37□□□□□ -2.03
SIR4YDR227W NUR1Q12066 484 aa2.37□□□□□ -2.03
SIR4YDR227W MDY2Q12285 212 aa2.37□□□□□ -2.03
SIR4YDR227W CLN1P20437 546 aa2.37□□□□□ -2.03
SIR4YDR227W NPR1P22211 790 aa2.37□□□□□ -2.03
SIR4YDR227W SEC14P24280 304 aaKnown RBP2.37□□□□□ -2.03
SIR4YDR227W EUG1P32474 517 aa2.37□□□□□ -2.03
SIR4YDR227W HRB1P38922 454 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SIR4YDR227W CNN1P43618 361 aa2.37□□□□□ -2.03
SIR4YDR227W YGR153WP48238 217 aa2.37□□□□□ -2.03
SIR4YDR227W SPE3Q12074 293 aaKnown RBP2.37□□□□□ -2.03
SIR4YDR227W PAR32Q12515 295 aaKnown RBP2.37□□□□□ -2.03
SIR4YDR227W RTP1Q12751 981 aa2.37□□□□□ -2.03
SIR4YDR227W HSP82P02829 709 aaKnown RBP2.36□□□□□ -2.03
SIR4YDR227W FUS1P11710 512 aa2.36□□□□□ -2.03
SIR4YDR227W AAC3P18238 307 aa2.36□□□□□ -2.03
SIR4YDR227W NFS1P25374 497 aa2.36□□□□□ -2.03
SIR4YDR227W PAT1P25644 796 aaKnown RBP2.36□□□□□ -2.03
SIR4YDR227W GPI10P30777 616 aa2.36□□□□□ -2.03
SIR4YDR227W LIP5P32875 414 aa2.36□□□□□ -2.03
SIR4YDR227W PXL1P36166 706 aa2.36□□□□□ -2.03
SIR4YDR227W SNF7P39929 240 aaKnown RBP2.36□□□□□ -2.03
SIR4YDR227W ERP6P53198 216 aa2.36□□□□□ -2.03
SIR4YDR227W TUB4P53378 473 aa2.36□□□□□ -2.03
SIR4YDR227W NMA111P53920 997 aa2.36□□□□□ -2.03
SIR4YDR227W YML131WQ03102 365 aa2.36□□□□□ -2.03
SIR4YDR227W RCF1Q03713 159 aa2.36□□□□□ -2.03
SIR4YDR227W CDA2Q06703 312 aa2.36□□□□□ -2.03
SIR4YDR227W PGA3Q12746 312 aaKnown RBP2.36□□□□□ -2.03
SIR4YDR227W MIS1P09440 975 aaKnown RBP2.36□□□□□ -2.03
SIR4YDR227W RAD53P22216 821 aa2.36□□□□□ -2.03
SIR4YDR227W MRC1P25588 1096 aa2.36□□□□□ -2.03
SIR4YDR227W PSY2P40164 858 aa2.36□□□□□ -2.03
SIR4YDR227W PIP2P52960 996 aa2.36□□□□□ -2.03
SIR4YDR227W CAF120P53836 1060 aa2.36□□□□□ -2.03
SIR4YDR227W ARX1Q03862 593 aaKnown RBP2.36□□□□□ -2.03
SIR4YDR227W ICL1P28240 557 aaPredicted RBP2.36□□□□□ -2.03
SIR4YDR227W RRN3P36070 627 aa2.36□□□□□ -2.03
SIR4YDR227W MIC60P36112 540 aa2.36□□□□□ -2.03
SIR4YDR227W PBY1P38254 753 aa2.36□□□□□ -2.03
SIR4YDR227W TDA3P38758 523 aa2.36□□□□□ -2.03
SIR4YDR227W MAF1P41910 395 aa2.36□□□□□ -2.03
SIR4YDR227W GYP8P43570 497 aa2.36□□□□□ -2.03
SIR4YDR227W RTA1P53047 317 aa2.36□□□□□ -2.03
SIR4YDR227W HOS3Q02959 697 aaKnown RBP2.36□□□□□ -2.03
SIR4YDR227W APC5Q08683 685 aa2.36□□□□□ -2.03
SIR4YDR227W ISU2Q12056 156 aa2.36□□□□□ -2.03
SIR4YDR227W RMP1Q12530 201 aa2.36□□□□□ -2.03
SIR4YDR227W PUP3P25451 205 aaKnown RBP2.35□□□□□ -2.03
SIR4YDR227W MCM5P29496 775 aaKnown RBP2.35□□□□□ -2.03
SIR4YDR227W DOM34P33309 386 aa2.35□□□□□ -2.03
SIR4YDR227W MOB1P40484 314 aa2.35□□□□□ -2.03
SIR4YDR227W MVP1P40959 511 aaKnown RBP2.35□□□□□ -2.03
SIR4YDR227W SMK1P41808 388 aa2.35□□□□□ -2.03
SIR4YDR227W SHR5P41912 237 aa2.35□□□□□ -2.03
SIR4YDR227W HEF3P53978 1044 aaKnown RBP2.35□□□□□ -2.03
SIR4YDR227W HRQ1Q05549 1077 aa2.35□□□□□ -2.03
SIR4YDR227W SPP382Q06411 708 aaPredicted RBP2.35□□□□□ -2.03
SIR4YDR227W REH1Q06709 432 aa2.35□□□□□ -2.03
SIR4YDR227W YOR389WQ08912 624 aa2.35□□□□□ -2.03
SIR4YDR227W YPL278CQ08990 100 aa2.35□□□□□ -2.03
SIR4YDR227W SMF3Q12078 473 aaPredicted RBP2.35□□□□□ -2.03
SIR4YDR227W HUA2Q12134 243 aa2.35□□□□□ -2.03
SIR4YDR227W MET17P06106 444 aa2.35□□□□□ -2.03
SIR4YDR227W INO1P11986 533 aa2.35□□□□□ -2.03
SIR4YDR227W ENA1P13587 1091 aa2.35□□□□□ -2.03
SIR4YDR227W KGD2P19262 463 aaPredicted RBP2.35□□□□□ -2.03
SIR4YDR227W HNM1P19807 563 aa2.35□□□□□ -2.03
SIR4YDR227W PRE10P21242 288 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
SIR4YDR227W PDR3P33200 976 aa2.35□□□□□ -2.03
SIR4YDR227W YTA6P40328 754 aa2.35□□□□□ -2.03
SIR4YDR227W UBC9P50623 157 aaPredicted RBP2.35□□□□□ -2.03
SIR4YDR227W HOS2P53096 452 aaPredicted RBP2.35□□□□□ -2.03
SIR4YDR227W YNL193WP53870 558 aa2.35□□□□□ -2.03
SIR4YDR227W BNI5P53890 448 aaKnown RBP2.35□□□□□ -2.03
SIR4YDR227W CBK1P53894 756 aa2.35□□□□□ -2.03
SIR4YDR227W SUR7P54003 302 aa2.35□□□□□ -2.03
SIR4YDR227W ENA2Q01896 1091 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms