RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W AI5_BETAQ9ZZX0 354 aa13.09□□□□□ -0.31
PTP1YDL230W KAR3P17119 729 aa13.08□□□□□ -0.32
PTP1YDL230W RRT12P25381 491 aa13.08□□□□□ -0.32
PTP1YDL230W DYS1P38791 387 aa13.08□□□□□ -0.32
PTP1YDL230W END3P39013 349 aa13.08□□□□□ -0.32
PTP1YDL230W FTR1P40088 404 aa13.08□□□□□ -0.32
PTP1YDL230W SBE2P42223 864 aaKnown RBP13.08□□□□□ -0.32
PTP1YDL230W DAS1P47005 663 aa13.08□□□□□ -0.32
PTP1YDL230W MDR1P53258 950 aa13.08□□□□□ -0.32
PTP1YDL230W STE20Q03497 939 aaKnown RBP13.08□□□□□ -0.32
PTP1YDL230W ACM1Q08981 209 aa13.08□□□□□ -0.32
PTP1YDL230W PUF4P25339 888 aaKnown RBP RIP-Chip data13.07□□□□□ -0.32not detected
PTP1YDL230W MMS21P38632 267 aa13.07□□□□□ -0.32
PTP1YDL230W SAD1P43589 448 aa13.07□□□□□ -0.32
PTP1YDL230W YJR039WP47107 1121 aa13.07□□□□□ -0.32
PTP1YDL230W USA1Q03714 838 aa13.07□□□□□ -0.32
PTP1YDL230W ZPS1Q12512 249 aa13.07□□□□□ -0.32
PTP1YDL230W ECM3Q99252 613 aa13.07□□□□□ -0.32
PTP1YDL230W VMA4P22203 233 aaKnown RBP13.06□□□□□ -0.32
PTP1YDL230W KIN82P25341 720 aa13.06□□□□□ -0.32
PTP1YDL230W PLC1P32383 869 aa13.06□□□□□ -0.32
PTP1YDL230W SAP185P40856 1058 aa13.06□□□□□ -0.32
PTP1YDL230W UFO1Q04511 668 aa13.06□□□□□ -0.32
PTP1YDL230W PUF3Q07807 879 aaKnown RBP RIP-Chip data13.06□□□□□ -0.32not detected
PTP1YDL230W SDH5Q08230 162 aa13.06□□□□□ -0.32
PTP1YDL230W ABP140Q08641 628 aaKnown RBP13.06□□□□□ -0.32
PTP1YDL230W GIS3Q12418 502 aa13.06□□□□□ -0.32
PTP1YDL230W SCJ1P25303 377 aa13.05□□□□□ -0.32
PTP1YDL230W FLR1P38124 548 aa13.05□□□□□ -0.32
PTP1YDL230W MSG5P38590 489 aa13.05□□□□□ -0.32
PTP1YDL230W CBR1P38626 284 aaKnown RBP13.05□□□□□ -0.32
PTP1YDL230W SHE10P53075 577 aa13.05□□□□□ -0.32
PTP1YDL230W MNP1P53163 194 aaPredicted RBP13.05□□□□□ -0.32
PTP1YDL230W BI2P03873 423 aa13.04□□□□□ -0.32
PTP1YDL230W BI4P03879 638 aa13.04□□□□□ -0.32
PTP1YDL230W RPS3P05750 240 aaKnown RBP13.04□□□□□ -0.32
PTP1YDL230W RPL4AP10664 362 aaKnown RBP13.04□□□□□ -0.32
PTP1YDL230W NAT1P12945 854 aaKnown RBP13.04□□□□□ -0.32
PTP1YDL230W PRE10P21242 288 aaKnown RBP RIP-Chip data13.04□□□□□ -0.32not detected
PTP1YDL230W DPH2P32461 534 aa13.04□□□□□ -0.32
PTP1YDL230W OAF3P36023 863 aa13.04□□□□□ -0.32
PTP1YDL230W SMX2P40204 77 aaKnown RBP13.04□□□□□ -0.32
PTP1YDL230W ZAP1P47043 880 aa13.04□□□□□ -0.32
PTP1YDL230W URB2P47108 1174 aa13.04□□□□□ -0.32
PTP1YDL230W RPL4BP49626 362 aaKnown RBP13.04□□□□□ -0.32
PTP1YDL230W ATG1P53104 897 aa13.04□□□□□ -0.32
PTP1YDL230W CPR6P53691 371 aaKnown RBP13.04□□□□□ -0.32
PTP1YDL230W ECM7Q06200 448 aa13.04□□□□□ -0.32
PTP1YDL230W BI3Q9ZZW7 517 aa13.04□□□□□ -0.32
PTP1YDL230W ECM29P38737 1868 aa13.04□□□□□ -0.32
PTP1YDL230W COX11P19516 300 aaKnown RBP13.03□□□□□ -0.32
PTP1YDL230W ASH1P34233 588 aa13.03□□□□□ -0.32
PTP1YDL230W VHC1P38329 1120 aa13.03□□□□□ -0.32
PTP1YDL230W INA22P40576 216 aa13.03□□□□□ -0.32
PTP1YDL230W TRS85P46944 698 aa13.03□□□□□ -0.32
PTP1YDL230W NOG2P53742 486 aaKnown RBP13.03□□□□□ -0.32
PTP1YDL230W PIG1Q06216 648 aa13.03□□□□□ -0.32
PTP1YDL230W YOR059CQ08448 450 aaKnown RBP13.03□□□□□ -0.32
PTP1YDL230W TYW1Q08960 810 aaKnown RBP13.03□□□□□ -0.32
PTP1YDL230W HIF1Q12373 385 aa13.03□□□□□ -0.32
PTP1YDL230W SEY1Q99287 776 aa13.03□□□□□ -0.32
PTP1YDL230W MAS2P11914 482 aa13.02□□□□□ -0.33
PTP1YDL230W TMT1P32643 299 aa13.02□□□□□ -0.33
PTP1YDL230W PEX2P32800 271 aa13.02□□□□□ -0.33
PTP1YDL230W GUA1P38625 525 aaKnown RBP13.02□□□□□ -0.33
PTP1YDL230W FRA1Q07825 749 aa13.02□□□□□ -0.33
PTP1YDL230W MPC54Q08550 464 aa13.02□□□□□ -0.33
PTP1YDL230W ASP3-2P0CX77 362 aa13.01□□□□□ -0.33
PTP1YDL230W ASP3-3P0CX78 362 aa13.01□□□□□ -0.33
PTP1YDL230W ASP3-4P0CX79 362 aa13.01□□□□□ -0.33
PTP1YDL230W ASP3-1P0CZ17 362 aa13.01□□□□□ -0.33
PTP1YDL230W ADH4P10127 382 aa13.01□□□□□ -0.33
PTP1YDL230W POL3P15436 1097 aa13.01□□□□□ -0.33
PTP1YDL230W CBF1P17106 351 aa13.01□□□□□ -0.33
PTP1YDL230W RME1P32338 300 aaKnown RBP13.01□□□□□ -0.33
PTP1YDL230W SMY2P32909 740 aaKnown RBP13.01□□□□□ -0.33
PTP1YDL230W MMS4P38257 691 aa13.01□□□□□ -0.33
PTP1YDL230W PXA1P41909 870 aa13.01□□□□□ -0.33
PTP1YDL230W RAD10P06838 210 aa13□□□□□ -0.33
PTP1YDL230W ADE3P07245 946 aaKnown RBP13□□□□□ -0.33
PTP1YDL230W SPO16P17122 198 aa13□□□□□ -0.33
PTP1YDL230W SEG2P34250 1132 aa13□□□□□ -0.33
PTP1YDL230W KSP1P38691 1029 aaKnown RBP13□□□□□ -0.33
PTP1YDL230W SSP1P38871 571 aa13□□□□□ -0.33
PTP1YDL230W TMN3P40071 706 aa13□□□□□ -0.33
PTP1YDL230W YMR134WP40207 237 aa13□□□□□ -0.33
PTP1YDL230W PUS2P53167 370 aa13□□□□□ -0.33
PTP1YDL230W YOL087CQ99247 1116 aa13□□□□□ -0.33
PTP1YDL230W HVG1P0CE11 249 aa12.99□□□□□ -0.33
PTP1YDL230W YER152CP10356 443 aa12.99□□□□□ -0.33
PTP1YDL230W PEP5P12868 1029 aa12.99□□□□□ -0.33
PTP1YDL230W ILV6P25605 309 aaKnown RBP12.99□□□□□ -0.33
PTP1YDL230W AIM21P40563 679 aa12.99□□□□□ -0.33
PTP1YDL230W INP52P50942 1183 aa12.99□□□□□ -0.33
PTP1YDL230W GPD1Q00055 391 aaKnown RBP12.99□□□□□ -0.33
PTP1YDL230W LAA1P39526 2014 aa12.99□□□□□ -0.33
PTP1YDL230W MOT1P32333 1867 aa12.99□□□□□ -0.33
PTP1YDL230W EST1P17214 699 aaPredicted RBP12.98□□□□□ -0.33
PTP1YDL230W SFL1P20134 766 aa12.98□□□□□ -0.33
PTP1YDL230W PRR1P28708 518 aa12.98□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms