RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B SIC1P38634 284 aa2.78□□□□□ -1.96
HTL1YCR020W-B SFB3P38810 929 aa2.78□□□□□ -1.96
HTL1YCR020W-B CCT7P42943 550 aaKnown RBP2.78□□□□□ -1.96
HTL1YCR020W-B ALG2P43636 503 aa2.78□□□□□ -1.96
HTL1YCR020W-B CTR1P49573 406 aa2.78□□□□□ -1.96
HTL1YCR020W-B PRP31P49704 494 aaPredicted RBP2.78□□□□□ -1.96
HTL1YCR020W-B ZIP2P53061 704 aa2.78□□□□□ -1.96
HTL1YCR020W-B YAP1802P53309 568 aa2.78□□□□□ -1.96
HTL1YCR020W-B ATG11Q12527 1178 aa2.78□□□□□ -1.96
HTL1YCR020W-B YKL033W-AQ86ZR7 236 aa2.78□□□□□ -1.96
HTL1YCR020W-B GLG1P36143 616 aa2.77□□□□□ -1.97
HTL1YCR020W-B ALY2P47029 1046 aa2.77□□□□□ -1.97
HTL1YCR020W-B PAN2P53010 1115 aaPredicted RBP2.77□□□□□ -1.97
HTL1YCR020W-B MTL1P53214 551 aa2.77□□□□□ -1.97
HTL1YCR020W-B TAF8Q03750 510 aa2.77□□□□□ -1.97
HTL1YCR020W-B CTK1Q03957 528 aaKnown RBP2.77□□□□□ -1.97
HTL1YCR020W-B GPR1Q12361 961 aa2.77□□□□□ -1.97
HTL1YCR020W-B ICT1Q12385 394 aa2.77□□□□□ -1.97
HTL1YCR020W-B SPC29P33419 253 aa2.76□□□□□ -1.97
HTL1YCR020W-B BET3P36149 193 aa2.76□□□□□ -1.97
HTL1YCR020W-B CCT3P39077 534 aaKnown RBP2.76□□□□□ -1.97
HTL1YCR020W-B YEL020CP39994 560 aa2.76□□□□□ -1.97
HTL1YCR020W-B BAP3P41815 604 aa2.76□□□□□ -1.97
HTL1YCR020W-B FLC1Q08967 793 aa2.76□□□□□ -1.97
HTL1YCR020W-B TAF3Q12297 353 aa2.76□□□□□ -1.97
HTL1YCR020W-B RPN13O13563 156 aa2.75□□□□□ -1.97
HTL1YCR020W-B PYC1P11154 1178 aaKnown RBP2.75□□□□□ -1.97
HTL1YCR020W-B PAM1P37304 830 aaKnown RBP2.75□□□□□ -1.97
HTL1YCR020W-B FMO1P38866 432 aa2.75□□□□□ -1.97
HTL1YCR020W-B ARG2P40360 574 aa2.75□□□□□ -1.97
HTL1YCR020W-B GLO1P50107 326 aa2.75□□□□□ -1.97
HTL1YCR020W-B UBC9P50623 157 aaPredicted RBP2.75□□□□□ -1.97
HTL1YCR020W-B MRI1Q06489 411 aaKnown RBP2.75□□□□□ -1.97
HTL1YCR020W-B ADE2P21264 571 aaKnown RBP2.74□□□□□ -1.97
HTL1YCR020W-B CCR4P31384 837 aaKnown RBP2.74□□□□□ -1.97
HTL1YCR020W-B ORC2P32833 620 aa2.74□□□□□ -1.97
HTL1YCR020W-B PHO11P35842 467 aa2.74□□□□□ -1.97
HTL1YCR020W-B UBS1P38290 277 aa2.74□□□□□ -1.97
HTL1YCR020W-B PHO12P38693 467 aa2.74□□□□□ -1.97
HTL1YCR020W-B YHR112CP38716 378 aa2.74□□□□□ -1.97
HTL1YCR020W-B HXT16P47185 567 aa2.74□□□□□ -1.97
HTL1YCR020W-B RTA1P53047 317 aa2.74□□□□□ -1.97
HTL1YCR020W-B ORC4P54791 529 aa2.74□□□□□ -1.97
HTL1YCR020W-B ATP25Q03153 612 aa2.74□□□□□ -1.97
HTL1YCR020W-B SIR3P06701 978 aa2.73□□□□□ -1.97
HTL1YCR020W-B HOM2P13663 365 aaKnown RBP2.73□□□□□ -1.97
HTL1YCR020W-B TMT1P32643 299 aa2.73□□□□□ -1.97
HTL1YCR020W-B TRZ1P36159 838 aaPredicted RBP2.73□□□□□ -1.97
HTL1YCR020W-B YHR020WP38708 688 aaKnown RBP2.73□□□□□ -1.97
HTL1YCR020W-B HRB1P38922 454 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
HTL1YCR020W-B LYS9P38999 446 aa2.73□□□□□ -1.97
HTL1YCR020W-B NUP60P39705 539 aa2.73□□□□□ -1.97
HTL1YCR020W-B BDH2P39713 417 aa2.73□□□□□ -1.97
HTL1YCR020W-B RSP5P39940 809 aaKnown RBP2.73□□□□□ -1.97
HTL1YCR020W-B YFL052WP43551 465 aa2.73□□□□□ -1.97
HTL1YCR020W-B HUL5P53119 910 aa2.73□□□□□ -1.97
HTL1YCR020W-B ATG4P53867 494 aa2.73□□□□□ -1.97
HTL1YCR020W-B SEC5P89102 971 aa2.73□□□□□ -1.97
HTL1YCR020W-B MLH3Q12083 715 aa2.73□□□□□ -1.97
HTL1YCR020W-B ZRT2Q12436 422 aa2.73□□□□□ -1.97
HTL1YCR020W-B CAN1P04817 590 aa2.72□□□□□ -1.97
HTL1YCR020W-B ERG6P25087 383 aaKnown RBP2.72□□□□□ -1.97
HTL1YCR020W-B APT2P36973 181 aa2.72□□□□□ -1.97
HTL1YCR020W-B ECM1P39715 212 aa2.72□□□□□ -1.97
HTL1YCR020W-B TY4A-JP47023 414 aa2.72□□□□□ -1.97
HTL1YCR020W-B YDR338CQ05497 695 aa2.72□□□□□ -1.97
HTL1YCR020W-B RGC1Q06108 1083 aaKnown RBP2.72□□□□□ -1.97
HTL1YCR020W-B USV1Q12132 391 aa2.72□□□□□ -1.97
HTL1YCR020W-B Q0142Q9ZZW4 58 aa2.72□□□□□ -1.97
HTL1YCR020W-B RPA135P22138 1203 aaKnown RBP2.71□□□□□ -1.98
HTL1YCR020W-B VPS34P22543 875 aa2.71□□□□□ -1.98
HTL1YCR020W-B APL2P36000 726 aaPredicted RBP2.71□□□□□ -1.98
HTL1YCR020W-B FHN1P53279 174 aa2.71□□□□□ -1.98
HTL1YCR020W-B ARG5,6Q01217 863 aa2.71□□□□□ -1.98
HTL1YCR020W-B NPY1P53164 384 aa2.7□□□□□ -1.98
HTL1YCR020W-B COX18P53239 316 aa2.7□□□□□ -1.98
HTL1YCR020W-B SLK19Q08581 821 aaKnown RBP2.7□□□□□ -1.98
HTL1YCR020W-B YLR149CQ99296 730 aa2.7□□□□□ -1.98
HTL1YCR020W-B HRP1Q99383 534 aaKnown RBP2.7□□□□□ -1.98
HTL1YCR020W-B ERG11P10614 530 aa2.69□□□□□ -1.98
HTL1YCR020W-B GAL11P19659 1081 aa2.69□□□□□ -1.98
HTL1YCR020W-B FUB1P25659 250 aa2.69□□□□□ -1.98
HTL1YCR020W-B CRP1P38845 465 aaKnown RBP2.69□□□□□ -1.98
HTL1YCR020W-B RPN10P38886 268 aaKnown RBP2.69□□□□□ -1.98
HTL1YCR020W-B PAC2P39937 518 aa2.69□□□□□ -1.98
HTL1YCR020W-B SPC98P53540 846 aa2.69□□□□□ -1.98
HTL1YCR020W-B FMP30Q02883 468 aa2.69□□□□□ -1.98
HTL1YCR020W-B RIM13Q03792 727 aa2.69□□□□□ -1.98
HTL1YCR020W-B STE12P13574 688 aa2.68□□□□□ -1.98
HTL1YCR020W-B THR1P17423 357 aaKnown RBP2.68□□□□□ -1.98
HTL1YCR020W-B RNR1P21524 888 aaKnown RBP2.68□□□□□ -1.98
HTL1YCR020W-B PTP1P25044 335 aa2.68□□□□□ -1.98
HTL1YCR020W-B SET3P36124 751 aa2.68□□□□□ -1.98
HTL1YCR020W-B GMH1P36125 273 aa2.68□□□□□ -1.98
HTL1YCR020W-B MIP6P38760 659 aaKnown RBP2.68□□□□□ -1.98
HTL1YCR020W-B GET2P40056 285 aa2.68□□□□□ -1.98
HTL1YCR020W-B GAT1P43574 510 aa2.68□□□□□ -1.98
HTL1YCR020W-B BNA2P47125 453 aa2.68□□□□□ -1.98
HTL1YCR020W-B MCM21Q06675 368 aa2.68□□□□□ -1.98
HTL1YCR020W-B OSW1Q08692 278 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms