RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C MCM21Q06675 368 aa6.4□□□□□ -1.38
RGD1YBR260C ACM1Q08981 209 aa6.4□□□□□ -1.38
RGD1YBR260C GYP5Q12344 894 aa6.4□□□□□ -1.38
RGD1YBR260C LAM4P38800 1345 aa6.4□□□□□ -1.39
RGD1YBR260C MEF1P25039 761 aa6.4□□□□□ -1.39
RGD1YBR260C RPT3P33298 428 aaKnown RBP6.4□□□□□ -1.39
RGD1YBR260C PPS1P38148 807 aa6.4□□□□□ -1.39
RGD1YBR260C LYS14P40971 790 aa6.4□□□□□ -1.39
RGD1YBR260C POL31P46957 487 aa6.4□□□□□ -1.39
RGD1YBR260C SYH1Q02875 849 aaKnown RBP6.4□□□□□ -1.39
RGD1YBR260C GIS4Q04233 774 aa6.4□□□□□ -1.39
RGD1YBR260C SEC10Q06245 871 aa6.4□□□□□ -1.39
RGD1YBR260C SGO1Q08490 590 aa6.4□□□□□ -1.39
RGD1YBR260C NTO1Q12311 748 aa6.4□□□□□ -1.39
RGD1YBR260C APM4Q99186 491 aa6.4□□□□□ -1.39
RGD1YBR260C YML002WP0CF17 737 aa6.39□□□□□ -1.39
RGD1YBR260C KIN2P13186 1147 aaKnown RBP6.39□□□□□ -1.39
RGD1YBR260C LCB1P25045 558 aaKnown RBP6.39□□□□□ -1.39
RGD1YBR260C MRM1P25270 412 aa6.39□□□□□ -1.39
RGD1YBR260C ERG7P38604 731 aa6.39□□□□□ -1.39
RGD1YBR260C BOL3P39724 118 aa6.39□□□□□ -1.39
RGD1YBR260C CST6P40535 587 aa6.39□□□□□ -1.39
RGD1YBR260C SNL1P40548 159 aa6.39□□□□□ -1.39
RGD1YBR260C LSC1P53598 329 aaKnown RBP6.39□□□□□ -1.39
RGD1YBR260C YNL058CP53947 316 aa6.39□□□□□ -1.39
RGD1YBR260C ALD6P54115 500 aaKnown RBP6.39□□□□□ -1.39
RGD1YBR260C SSQ1Q05931 657 aaPredicted RBP6.39□□□□□ -1.39
RGD1YBR260C SMC5Q08204 1093 aa6.39□□□□□ -1.39
RGD1YBR260C PEX15Q08215 383 aa6.39□□□□□ -1.39
RGD1YBR260C RSA1Q08932 381 aa6.39□□□□□ -1.39
RGD1YBR260C RKM1Q08961 583 aaPredicted RBP6.39□□□□□ -1.39
RGD1YBR260C SAM3Q08986 587 aa6.39□□□□□ -1.39
RGD1YBR260C TAF3Q12297 353 aa6.39□□□□□ -1.39
RGD1YBR260C SNU66Q12420 587 aaPredicted RBP6.39□□□□□ -1.39
RGD1YBR260C YPT6Q99260 215 aa6.39□□□□□ -1.39
RGD1YBR260C YIL177CP40434 1758 aa6.39□□□□□ -1.39
RGD1YBR260C YJL225CP40889 1758 aa6.39□□□□□ -1.39
RGD1YBR260C HIS4P00815 799 aaKnown RBP6.38□□□□□ -1.39
RGD1YBR260C FUS1P11710 512 aa6.38□□□□□ -1.39
RGD1YBR260C CLB3P24870 427 aa6.38□□□□□ -1.39
RGD1YBR260C MRPL32P25348 183 aa6.38□□□□□ -1.39
RGD1YBR260C FRD1P32614 470 aaKnown RBP6.38□□□□□ -1.39
RGD1YBR260C XRS2P33301 854 aa6.38□□□□□ -1.39
RGD1YBR260C PBP2P38151 413 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
RGD1YBR260C ECM2P38241 364 aaKnown RBP6.38□□□□□ -1.39
RGD1YBR260C DLD3P39976 496 aaKnown RBP6.38□□□□□ -1.39
RGD1YBR260C DSE1P40077 573 aa6.38□□□□□ -1.39
RGD1YBR260C IES2P40154 320 aa6.38□□□□□ -1.39
RGD1YBR260C DPH1P40487 425 aaKnown RBP6.38□□□□□ -1.39
RGD1YBR260C SWP82P43554 623 aa6.38□□□□□ -1.39
RGD1YBR260C BNA3P47039 444 aaKnown RBP6.38□□□□□ -1.39
RGD1YBR260C UBP15P50101 1230 aa6.38□□□□□ -1.39
RGD1YBR260C ZIP2P53061 704 aa6.38□□□□□ -1.39
RGD1YBR260C RIM8P53179 542 aa6.38□□□□□ -1.39
RGD1YBR260C MTC5Q03897 1148 aa6.38□□□□□ -1.39
RGD1YBR260C UTP14Q04500 899 aaKnown RBP6.38□□□□□ -1.39
RGD1YBR260C YPR172WQ06608 200 aa6.38□□□□□ -1.39
RGD1YBR260C AIM41Q12032 185 aa6.38□□□□□ -1.39
RGD1YBR260C NUC1P08466 329 aa6.38□□□□□ -1.39
RGD1YBR260C YME1P32795 747 aa6.38□□□□□ -1.39
RGD1YBR260C GIP1P38229 639 aa6.38□□□□□ -1.39
RGD1YBR260C TRM5P38793 499 aa6.38□□□□□ -1.39
RGD1YBR260C SMC2P38989 1170 aaKnown RBP6.38□□□□□ -1.39
RGD1YBR260C OAF1P39720 1047 aaPredicted RBP6.38□□□□□ -1.39
RGD1YBR260C MMM1P41800 426 aa6.38□□□□□ -1.39
RGD1YBR260C IRC6P43615 237 aa6.38□□□□□ -1.39
RGD1YBR260C SNX4P47057 423 aa6.38□□□□□ -1.39
RGD1YBR260C SMP3Q04174 516 aa6.38□□□□□ -1.39
RGD1YBR260C EST2Q06163 884 aa6.38□□□□□ -1.39
RGD1YBR260C MLH2Q07980 695 aa6.38□□□□□ -1.39
RGD1YBR260C MNL2Q12205 849 aa6.38□□□□□ -1.39
RGD1YBR260C SEN2P16658 377 aa6.37□□□□□ -1.39
RGD1YBR260C OPI1P21957 404 aa6.37□□□□□ -1.39
RGD1YBR260C PAT1P25644 796 aaKnown RBP6.37□□□□□ -1.39
RGD1YBR260C PLC1P32383 869 aa6.37□□□□□ -1.39
RGD1YBR260C HIR1P32479 840 aa6.37□□□□□ -1.39
RGD1YBR260C PRP40P33203 583 aaKnown RBP6.37□□□□□ -1.39
RGD1YBR260C MIF2P35201 549 aa6.37□□□□□ -1.39
RGD1YBR260C YKL050CP35736 922 aa6.37□□□□□ -1.39
RGD1YBR260C TRZ1P36159 838 aaPredicted RBP6.37□□□□□ -1.39
RGD1YBR260C YHL008CP38750 627 aa6.37□□□□□ -1.39
RGD1YBR260C GCD14P46959 383 aaPredicted RBP6.37□□□□□ -1.39
RGD1YBR260C ALB1P47019 175 aaPredicted RBP6.37□□□□□ -1.39
RGD1YBR260C REX2P54964 269 aaKnown RBP6.37□□□□□ -1.39
RGD1YBR260C PKH1Q03407 766 aa6.37□□□□□ -1.39
RGD1YBR260C TAF12Q03761 539 aa6.37□□□□□ -1.39
RGD1YBR260C PRP42Q03776 544 aaKnown RBP6.37□□□□□ -1.39
RGD1YBR260C HMO1Q03973 246 aaKnown RBP6.37□□□□□ -1.39
RGD1YBR260C VCX1Q99385 411 aa6.37□□□□□ -1.39
RGD1YBR260C MPH3P0CE00 602 aa6.37□□□□□ -1.39
RGD1YBR260C TSR4P25040 408 aa6.37□□□□□ -1.39
RGD1YBR260C HSP30P25619 332 aa6.37□□□□□ -1.39
RGD1YBR260C YJU2P28320 278 aaPredicted RBP6.37□□□□□ -1.39
RGD1YBR260C SUV3P32580 737 aa6.37□□□□□ -1.39
RGD1YBR260C RPT5P33297 434 aaKnown RBP6.37□□□□□ -1.39
RGD1YBR260C NIP100P33420 868 aa6.37□□□□□ -1.39
RGD1YBR260C PDX3P38075 228 aaKnown RBP6.37□□□□□ -1.39
RGD1YBR260C MRX3P38172 270 aa6.37□□□□□ -1.39
RGD1YBR260C DIA4P38705 446 aaPredicted RBP6.37□□□□□ -1.39
RGD1YBR260C YJR054WP47114 497 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms