RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	HIS6	P40545	261 aa		4.1	□□□□□ -1.75
YAL004W	YAL004W	HOL1	P53389	586 aa		4.1	□□□□□ -1.75
YAL004W	YAL004W	VPS30	Q02948	557 aa		4.1	□□□□□ -1.75
YAL004W	YAL004W	PRP3	Q03338	469 aa	Predicted RBP	4.1	□□□□□ -1.75
YAL004W	YAL004W	YLR225C	Q05948	407 aa	Known RBP	4.1	□□□□□ -1.75
YAL004W	YAL004W	RPS19A	P07280	144 aa	Known RBP	4.09	□□□□□ -1.75
YAL004W	YAL004W	RPS19B	P07281	144 aa	Predicted RBP	4.09	□□□□□ -1.75
YAL004W	YAL004W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YAL004W	YAL004W	MKK2	P32491	506 aa		4.09	□□□□□ -1.75
YAL004W	YAL004W	PRP19	P32523	503 aa	Known RBP	4.09	□□□□□ -1.75
YAL004W	YAL004W	SMY2	P32909	740 aa	Known RBP	4.09	□□□□□ -1.75
YAL004W	YAL004W	MEP1	P40260	492 aa		4.09	□□□□□ -1.75
YAL004W	YAL004W	DUG1	P43616	481 aa	Known RBP	4.09	□□□□□ -1.75
YAL004W	YAL004W	GNP1	P48813	663 aa		4.09	□□□□□ -1.75
YAL004W	YAL004W	YGR016W	P53209	190 aa		4.09	□□□□□ -1.75
YAL004W	YAL004W	SRT1	Q03175	343 aa		4.09	□□□□□ -1.75
YAL004W	YAL004W	PKH1	Q03407	766 aa		4.09	□□□□□ -1.75
YAL004W	YAL004W	YOR223W	Q12015	292 aa		4.09	□□□□□ -1.75
YAL004W	YAL004W	CLF1	Q12309	687 aa	Predicted RBP	4.09	□□□□□ -1.75
YAL004W	YAL004W	LYS2	P07702	1392 aa		4.09	□□□□□ -1.75
YAL004W	YAL004W	PRP45	P28004	379 aa	Predicted RBP	4.08	□□□□□ -1.76
YAL004W	YAL004W	VMA8	P32610	256 aa	Known RBP	4.08	□□□□□ -1.76
YAL004W	YAL004W	RER2	P35196	286 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	RKM3	P38222	552 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	OPY1	P38271	328 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	YBR287W	P38355	427 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	CAJ1	P39101	391 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	VPS8	P39702	1274 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	RVS167	P39743	482 aa	Known RBP	4.08	□□□□□ -1.76
YAL004W	YAL004W	ACA1	P39970	489 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	GPP2	P40106	250 aa	Known RBP	4.08	□□□□□ -1.76
YAL004W	YAL004W	RRT14	P40470	206 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	SGM1	P47166	707 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	ATP22	P50273	684 aa	Predicted RBP	4.08	□□□□□ -1.76
YAL004W	YAL004W	BTN2	P53286	410 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	GTR1	Q00582	310 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	SPN1	Q06505	410 aa	Predicted RBP	4.08	□□□□□ -1.76
YAL004W	YAL004W	PSR1	Q07800	427 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	SDH5	Q08230	162 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	YOR059C	Q08448	450 aa	Known RBP	4.08	□□□□□ -1.76
YAL004W	YAL004W	LPX1	Q12405	387 aa	Known RBP	4.08	□□□□□ -1.76
YAL004W	YAL004W	RMP1	Q12530	201 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	HBN1	Q96VH4	193 aa		4.08	□□□□□ -1.76
YAL004W	YAL004W	SRD1	P09007	221 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	RAD18	P10862	487 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	INO1	P11986	533 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	MRP7	P12687	371 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	TOP3	P13099	656 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	PFK1	P16861	987 aa	Known RBP	4.07	□□□□□ -1.76
YAL004W	YAL004W	RAD53	P22216	821 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	RER1	P25560	188 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	KRR1	P25586	316 aa	Predicted RBP	4.07	□□□□□ -1.76
YAL004W	YAL004W	HSP104	P31539	908 aa	Known RBP	4.07	□□□□□ -1.76
YAL004W	YAL004W	IME2	P32581	645 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	STO1	P34160	861 aa	Known RBP	4.07	□□□□□ -1.76
YAL004W	YAL004W	NOP4	P37838	685 aa	Known RBP	4.07	□□□□□ -1.76
YAL004W	YAL004W	SAH1	P39954	449 aa	Known RBP	4.07	□□□□□ -1.76
YAL004W	YAL004W	NIT2	P47016	307 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	YJR096W	P47137	282 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	NUT1	P53114	1132 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	MET13	P53128	600 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	MEP3	P53390	489 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	SIW14	P53965	281 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	BMS1	Q08965	1183 aa	Known RBP	4.07	□□□□□ -1.76
YAL004W	YAL004W	YTM1	Q12024	460 aa	Predicted RBP	4.07	□□□□□ -1.76
YAL004W	YAL004W	SPO21	Q12411	609 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	NSI1	Q12457	570 aa		4.07	□□□□□ -1.76
YAL004W	YAL004W	RSF2	P46974	1380 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	COQ4	O13525	335 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	SEC23	P15303	768 aa	Known RBP	4.06	□□□□□ -1.76
YAL004W	YAL004W	FUR1	P18562	216 aa	Known RBP	4.06	□□□□□ -1.76
YAL004W	YAL004W	ECM32	P32644	1121 aa	Known RBP	4.06	□□□□□ -1.76
YAL004W	YAL004W	BEM3	P32873	1128 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	DOM34	P33309	386 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YAL004W	YAL004W	YKL100C	P34248	587 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	YKL107W	P34251	309 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	RXT2	P38255	430 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	BCD1	P38772	366 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	FET4	P40988	552 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	BFA1	P47113	574 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	NPY1	P53164	384 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	VTI1	Q04338	217 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	YDR306C	Q06640	478 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	HSP42	Q12329	375 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	RKM4	Q12504	494 aa		4.06	□□□□□ -1.76
YAL004W	YAL004W	TPM1	P17536	199 aa	Known RBP	4.05	□□□□□ -1.76
YAL004W	YAL004W	SFL1	P20134	766 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	PGS1	P25578	521 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	AAD3	P25612	363 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	PCL2	P25693	308 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	GCD7	P32502	381 aa	Predicted RBP	4.05	□□□□□ -1.76
YAL004W	YAL004W	YEL1	P34225	687 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	YBR284W	P38150	797 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	PSY4	P38193	441 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	PEX28	P38848	579 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	CKB2	P38930	258 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	PEX7	P39108	375 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	MBP1	P39678	833 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	OAF1	P39720	1047 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms