RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 TDA5Q06417 326 aaKnown RBP9.19□□□□□ -0.94
LSR1LSR1 MAG2Q06436 670 aaKnown RBP9.19□□□□□ -0.94
LSR1LSR1 UBX5Q06682 500 aa9.19□□□□□ -0.94
LSR1LSR1 RIB2Q12362 591 aaKnown RBP9.19□□□□□ -0.94
LSR1LSR1 CSR2Q12734 1121 aa9.19□□□□□ -0.94
LSR1LSR1 TY4A-HQ6Q5P6 413 aa9.19□□□□□ -0.94
LSR1LSR1 JIP3O13555 125 aa9.18□□□□□ -0.94
LSR1LSR1 GCR1P07261 785 aa9.18□□□□□ -0.94
LSR1LSR1 ILV2P07342 687 aaKnown RBP9.18□□□□□ -0.94
LSR1LSR1 RNR1P21524 888 aaKnown RBP9.18□□□□□ -0.94
LSR1LSR1 SWE1P32944 819 aa9.18□□□□□ -0.94
LSR1LSR1 SHP1P34223 423 aa9.18□□□□□ -0.94
LSR1LSR1 CSG2P35206 410 aa9.18□□□□□ -0.94
LSR1LSR1 MCR1P36060 302 aaKnown RBP9.18□□□□□ -0.94
LSR1LSR1 YKR018CP36114 725 aa9.18□□□□□ -0.94
LSR1LSR1 HEK2P38199 381 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
LSR1LSR1 DAS1P47005 663 aa9.18□□□□□ -0.94
LSR1LSR1 TMA22P47089 198 aaPredicted RBP9.18□□□□□ -0.94
LSR1LSR1 CPR7P47103 393 aa9.18□□□□□ -0.94
LSR1LSR1 VPS16Q03308 798 aa9.18□□□□□ -0.94
LSR1LSR1 UFO1Q04511 668 aa9.18□□□□□ -0.94
LSR1LSR1 CST9Q06032 482 aa9.18□□□□□ -0.94
LSR1LSR1 SUB2Q07478 446 aaKnown RBP9.18□□□□□ -0.94
LSR1LSR1 ISA1Q07821 250 aaPredicted RBP9.18□□□□□ -0.94
LSR1LSR1 RPS3P05750 240 aaKnown RBP9.17□□□□□ -0.94
LSR1LSR1 ADE3P07245 946 aaKnown RBP9.17□□□□□ -0.94
LSR1LSR1 FBP1P09201 348 aa9.17□□□□□ -0.94
LSR1LSR1 SPO16P17122 198 aa9.17□□□□□ -0.94
LSR1LSR1 VMA1P17255 1071 aaKnown RBP9.17□□□□□ -0.94
LSR1LSR1 BAS1P22035 811 aa9.17□□□□□ -0.94
LSR1LSR1 COT1P32798 439 aa9.17□□□□□ -0.94
LSR1LSR1 YBR032WP38223 100 aa9.17□□□□□ -0.94
LSR1LSR1 PMC1P38929 1173 aaPredicted RBP9.17□□□□□ -0.94
LSR1LSR1 NPP2P39997 493 aa9.17□□□□□ -0.94
LSR1LSR1 FET4P40988 552 aa9.17□□□□□ -0.94
LSR1LSR1 PUS2P53167 370 aa9.17□□□□□ -0.94
LSR1LSR1 RAD10P06838 210 aa9.16□□□□□ -0.94
LSR1LSR1 EST1P17214 699 aaPredicted RBP9.16□□□□□ -0.94
LSR1LSR1 IME1P21190 360 aa9.16□□□□□ -0.94
LSR1LSR1 SSD1P24276 1250 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
LSR1LSR1 PIN4P34217 668 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
LSR1LSR1 MRX3P38172 270 aa9.16□□□□□ -0.94
LSR1LSR1 YMR134WP40207 237 aa9.16□□□□□ -0.94
LSR1LSR1 HSH155P49955 971 aaKnown RBP9.16□□□□□ -0.94
LSR1LSR1 YPL109CQ02981 657 aa9.16□□□□□ -0.94
LSR1LSR1 MOT1P32333 1867 aa9.16□□□□□ -0.94
LSR1LSR1 TY1B-AO13527 1196 aaKnown RBP9.15□□□□□ -0.94
LSR1LSR1 BI2P03873 423 aa9.15□□□□□ -0.94
LSR1LSR1 BI4P03879 638 aa9.15□□□□□ -0.94
LSR1LSR1 DED1P06634 604 aaKnown RBP9.15□□□□□ -0.94
LSR1LSR1 TPS2P31688 896 aaKnown RBP9.15□□□□□ -0.94
LSR1LSR1 TRM2P33753 639 aa9.15□□□□□ -0.94
LSR1LSR1 ATG19P35193 415 aa9.15□□□□□ -0.94
LSR1LSR1 RPC37P36121 282 aa9.15□□□□□ -0.94
LSR1LSR1 YJL007CP47080 104 aa9.15□□□□□ -0.94
LSR1LSR1 ZIP2P53061 704 aa9.15□□□□□ -0.94
LSR1LSR1 YNL040WP53960 456 aaPredicted RBP9.15□□□□□ -0.94
LSR1LSR1 RPA49Q01080 415 aaPredicted RBP9.15□□□□□ -0.94
LSR1LSR1 SPC24Q04477 213 aa9.15□□□□□ -0.94
LSR1LSR1 ERV41Q04651 352 aa9.15□□□□□ -0.94
LSR1LSR1 RGA2Q06407 1009 aa9.15□□□□□ -0.94
LSR1LSR1 IWR1Q07532 353 aaPredicted RBP9.15□□□□□ -0.94
LSR1LSR1 NOC3Q07896 663 aaPredicted RBP9.15□□□□□ -0.94
LSR1LSR1 BI3Q9ZZW7 517 aa9.15□□□□□ -0.94
LSR1LSR1 AI5_BETAQ9ZZX0 354 aa9.15□□□□□ -0.94
LSR1LSR1 LAA1P39526 2014 aa9.14□□□□□ -0.95
LSR1LSR1 THS1P04801 734 aaKnown RBP9.14□□□□□ -0.95
LSR1LSR1 PRP4P20053 465 aaKnown RBP9.14□□□□□ -0.95
LSR1LSR1 PER1P25625 357 aa9.14□□□□□ -0.95
LSR1LSR1 TMT1P32643 299 aa9.14□□□□□ -0.95
LSR1LSR1 PEX2P32800 271 aa9.14□□□□□ -0.95
LSR1LSR1 DYS1P38791 387 aa9.14□□□□□ -0.95
LSR1LSR1 RTT102P53330 157 aa9.14□□□□□ -0.95
LSR1LSR1 HOT1Q03213 719 aa9.14□□□□□ -0.95
LSR1LSR1 COQ9Q05779 260 aa9.14□□□□□ -0.95
LSR1LSR1 IES4Q08561 116 aa9.14□□□□□ -0.95
LSR1LSR1 OSW1Q08692 278 aa9.14□□□□□ -0.95
LSR1LSR1 GIS3Q12418 502 aa9.14□□□□□ -0.95
LSR1LSR1 RIF1P29539 1916 aa9.13□□□□□ -0.95
LSR1LSR1 RAD3P06839 778 aa9.13□□□□□ -0.95
LSR1LSR1 GAL2P13181 574 aa9.13□□□□□ -0.95
LSR1LSR1 AEP2P22136 580 aa9.13□□□□□ -0.95
LSR1LSR1 YDJ1P25491 409 aaKnown RBP9.13□□□□□ -0.95
LSR1LSR1 CDC48P25694 835 aaKnown RBP9.13□□□□□ -0.95
LSR1LSR1 ZUO1P32527 433 aaKnown RBP9.13□□□□□ -0.95
LSR1LSR1 UTR4P32626 227 aa9.13□□□□□ -0.95
LSR1LSR1 SET3P36124 751 aa9.13□□□□□ -0.95
LSR1LSR1 PAM1P37304 830 aaKnown RBP9.13□□□□□ -0.95
LSR1LSR1 SIC1P38634 284 aa9.13□□□□□ -0.95
LSR1LSR1 RSM26P47141 266 aa9.13□□□□□ -0.95
LSR1LSR1 ASN1P49089 572 aaKnown RBP9.13□□□□□ -0.95
LSR1LSR1 ORC5P50874 479 aa9.13□□□□□ -0.95
LSR1LSR1 MDR1P53258 950 aa9.13□□□□□ -0.95
LSR1LSR1 TBF1Q02457 562 aa9.13□□□□□ -0.95
LSR1LSR1 TFB2Q02939 513 aa9.13□□□□□ -0.95
LSR1LSR1 SHE9Q04172 456 aa9.13□□□□□ -0.95
LSR1LSR1 PMS1P14242 873 aa9.12□□□□□ -0.95
LSR1LSR1 MVD1P32377 396 aaKnown RBP9.12□□□□□ -0.95
LSR1LSR1 ABD1P32783 436 aaPredicted RBP9.12□□□□□ -0.95
LSR1LSR1 CCL1P37366 393 aa9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms