RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 FLIIQ13045 1269 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 SPECC1LQ69YQ0 1117 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 LARGE2Q8N3Y3 721 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 USH1CQ9Y6N9 552 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 WDR97A6NE52 1622 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 TMCO3Q6UWJ1 677 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 NCAPD3P42695 1498 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 BACH1O14867 736 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 MCM9Q9NXL9 1143 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
SPTA1-201ENST00000368147 CHMP2AO43633 222 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 TNNI2P48788 182 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 NAPAP54920 295 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 RNF168Q8IYW5 571 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-201ENST00000368147 TRIM35Q9UPQ4 493 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 TIAM1Q13009 1591 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 LAMC3Q9Y6N6 1575 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 TBCAO75347 108 aaKnown RBP8.07□□□□□ -1.12
SPTA1-201ENST00000368147 MYCLP12524 364 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-201ENST00000368147 CCDC184Q52MB2 194 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 FAM182BQ5T319 152 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 CNBD1Q8NA66 436 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 PPFIBP2Q8ND30 876 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 RAB3IL1Q8TBN0 382 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 SMARCC1Q92922 1105 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-201ENST00000368147 TCP11L1Q9NUJ3 509 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 USP16Q9Y5T5 823 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 PTPDC1A2A3K4 754 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 RXRAP19793 462 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 RBM28Q9NW13 759 aaKnown RBP8.07□□□□□ -1.12
SPTA1-201ENST00000368147 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-201ENST00000368147 WTAPQ15007 396 aa8.07□□□□□ -1.12
SPTA1-201ENST00000368147 IRS4O14654 1257 aaPredicted RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 HCLS1P14317 486 aaPredicted RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 ARID5AQ03989 594 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 TCIRG1Q13488 830 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 ZGPATQ8N5A5 531 aaKnown RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 SSH1Q8WYL5 1049 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 CRACR2AQ9BSW2 395 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 GADL1Q6ZQY3 521 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 ANO3Q9BYT9 981 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 LDHBP07195 334 aaKnown RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 CASQ1P31415 396 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 FAM47CQ5HY64 1035 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 PA2G4Q9UQ80 394 aaKnown RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 SLU7O95391 586 aaKnown RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 USH1GQ495M9 461 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 HOOK3Q86VS8 718 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 SPDYE3A6NKU9 549 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 CBX1P83916 185 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 DNAJC21Q5F1R6 531 aaKnown RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 ZNF710Q8N1W2 664 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 CCDC12Q8WUD4 166 aaPredicted RBP8.06□□□□□ -1.12
SPTA1-201ENST00000368147 DDX12PQ92771 950 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 SMTNL1A8MU46 457 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 UQCRHP07919 91 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 SH2D4BQ5SQS7 431 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 MIPOL1Q8TD10 442 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 EXOC1Q9NV70 894 aa8.06□□□□□ -1.12
SPTA1-201ENST00000368147 BIRC2Q13490 618 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 PAGR1Q9BTK6 254 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 CEP83Q9Y592 693 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 FANCIQ9NVI1 1328 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 ZNF608Q9ULD9 1512 aaPredicted RBP8.05□□□□□ -1.12
SPTA1-201ENST00000368147 RBM25P49756 843 aaKnown RBP8.05□□□□□ -1.12
SPTA1-201ENST00000368147 GTF2A1P52655 376 aaPredicted RBP8.05□□□□□ -1.12
SPTA1-201ENST00000368147 CTR9Q6PD62 1173 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 CCDC148Q8NFR7 591 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 GON4LQ3T8J9 2241 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 CCDC102AQ96A19 550 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 SYCE3A1L190 88 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 STX6O43752 255 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 ZSCAN31Q96LW9 406 aaPredicted RBP8.05□□□□□ -1.12
SPTA1-201ENST00000368147 MBIPQ9NS73 344 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 ATF5Q9Y2D1 282 aaPredicted RBP8.05□□□□□ -1.12
SPTA1-201ENST00000368147 CTTNBP2Q8WZ74 1663 aa8.05□□□□□ -1.12
SPTA1-201ENST00000368147 TRIM37O94972 964 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 FGFR1OPO95684 399 aaKnown RBP8.04□□□□□ -1.12
SPTA1-201ENST00000368147 IARSP41252 1262 aaKnown RBP8.04□□□□□ -1.12
SPTA1-201ENST00000368147 ARHGAP29Q52LW3 1261 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 GDPD2Q9HCC8 539 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 ASXL2Q76L83 1435 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 TACC1O75410 805 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 CETN1Q12798 172 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 GRIN2AQ12879 1464 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 STAT6P42226 847 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 BAG6P46379 1132 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 SMCR8Q8TEV9 937 aaPredicted RBP8.04□□□□□ -1.12
SPTA1-201ENST00000368147 TRIM6Q9C030 488 aaPredicted RBP8.04□□□□□ -1.12
SPTA1-201ENST00000368147 IVNS1ABPQ9Y6Y0 642 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 CCDC160A6NGH7 325 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 SH3BP5O60239 455 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 PRIM1P49642 420 aaKnown RBP8.04□□□□□ -1.12
SPTA1-201ENST00000368147 KMT5BQ4FZB7 885 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 SLC9C2Q5TAH2 1124 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 DPP8Q6V1X1 898 aaPredicted RBP8.04□□□□□ -1.12
SPTA1-201ENST00000368147 VPS36Q86VN1 386 aa8.04□□□□□ -1.12
SPTA1-201ENST00000368147 NOP56O00567 594 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms