RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 B4DLN1 442 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
COL4A5-202ENST00000361603 ERMNQ8TAM6 284 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 RMND1Q9NWS8 449 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 USP6P35125 1406 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 PKNOX2Q96KN3 472 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 UVSSAQ2YD98 709 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 SUPT20HQ8NEM7 779 aa13.19□□□□□ -0.3
COL4A5-202ENST00000361603 ZC3H12CQ9C0D7 883 aaKnown RBP13.19□□□□□ -0.3
COL4A5-202ENST00000361603 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
COL4A5-202ENST00000361603 SLC9C2Q5TAH2 1124 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 FEZ1Q99689 392 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 CALML3P27482 149 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 METP08581 1390 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
COL4A5-202ENST00000361603 KCNG4Q8TDN1 519 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 BRPF1P55201 1214 aaPredicted RBP13.18□□□□□ -0.3
COL4A5-202ENST00000361603 PUM3Q15397 648 aaKnown RBP13.18□□□□□ -0.3
COL4A5-202ENST00000361603 UBE2HP62256 183 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 VPS36Q86VN1 386 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
COL4A5-202ENST00000361603 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
COL4A5-202ENST00000361603 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
COL4A5-202ENST00000361603 A2ML1A8K2U0 1454 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
COL4A5-202ENST00000361603 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
COL4A5-202ENST00000361603 EIF4A1P60842 406 aaKnown RBP13.17□□□□□ -0.3
COL4A5-202ENST00000361603 RTN1Q16799 776 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 MAP3K4Q9Y6R4 1608 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
COL4A5-202ENST00000361603 STX1AQ16623 288 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
COL4A5-202ENST00000361603 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 TTC6Q86TZ1 520 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-202ENST00000361603 NMIQ13287 307 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-202ENST00000361603 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 ERLIN1O75477 346 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
COL4A5-202ENST00000361603 CROCC2H7BZ55 1655 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 GNPATO15228 680 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 TNNI2P48788 182 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 KDRP35968 1356 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 LDHBP07195 334 aaKnown RBP13.16□□□□□ -0.3
COL4A5-202ENST00000361603 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
COL4A5-202ENST00000361603 SSFA2P28290 1259 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 CETN2P41208 172 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 CETN1Q12798 172 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 TFCP2Q12800 502 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 KDM6BO15054 1643 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 GSDMDP57764 484 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 CWF19L2Q2TBE0 894 aaKnown RBP13.15□□□□□ -0.3
COL4A5-202ENST00000361603 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
COL4A5-202ENST00000361603 TMX3Q96JJ7 454 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 PHKG2P15735 406 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 NF2P35240 595 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 JDP2Q8WYK2 163 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 BRF1Q92994 677 aa13.15□□□□□ -0.3
COL4A5-202ENST00000361603 FSIP1Q8NA03 581 aa13.15□□□□□ -0.31
COL4A5-202ENST00000361603 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 CARD10Q9BWT7 1032 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 ADGRB3O60242 1522 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 CCDC181Q5TID7 509 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 JAKMIP3Q5VZ66 844 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 PDE6BP35913 854 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 CFAP100Q494V2 611 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
COL4A5-202ENST00000361603 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
COL4A5-202ENST00000361603 LAMC1P11047 1609 aa13.13□□□□□ -0.31
COL4A5-202ENST00000361603 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■□ 24
COL4A5-202ENST00000361603 TTLL12Q14166 644 aaPredicted RBP13.13□□□□□ -0.31
COL4A5-202ENST00000361603 ABCC4O15439 1325 aa13.13□□□□□ -0.31
COL4A5-202ENST00000361603 CHMLP26374 656 aa13.13□□□□□ -0.31
COL4A5-202ENST00000361603 UBA7P41226 1012 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms