RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Zbtb1Q91VL9 713 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ppp4r3bQ922R5 820 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Bcl11bQ99PV8 884 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Kcna4Q61423 654 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Smarcc2Q6PDG5 1213 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Jmjd4Q8BFT6 427 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Gimap5Q8BWF2 308 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Lmbrd2Q8C561 694 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ccdc158Q8CDI6 1109 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Rbm17Q8JZX4 405 aaKnown RBP12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 GptQ8QZR5 496 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 SrrtQ99MR6 875 aaKnown RBP12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Kcnq5Q9JK45 933 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Pde3aQ9Z0X4 1141 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Usp42B2RQC2 1324 aaKnown RBP12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Zscan25B2RX31 543 aa12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Cops6O88545 324 aa12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Zbtb38Q3LR78 1197 aa12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Nol10Q5RJG1 687 aaKnown RBP12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Trim56Q80VI1 734 aaKnown RBP12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Zkscan8Q8BSL0 588 aa12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Atad2Q8CDM1 1040 aa12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ddx54Q8K4L0 874 aaKnown RBP12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Nlrp3Q8R4B8 1033 aa12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Rcan3Q9JKK0 239 aa12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Mad1l1Q9WTX8 717 aaKnown RBP12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Foxo4Q9WVH3 505 aa12.05□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Col3a1P08121 1464 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Cyp2d34L7N463 504 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Exoc5Q3TPX4 708 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Esyt1Q3U7R1 1092 aaKnown RBP12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ltv1Q6NSQ7 470 aaKnown RBP12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Paxip1Q6NZQ4 1056 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Gm21985Q6P6P5 1106 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Map10Q8BJS7 891 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Shisa4Q8CA71 197 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Nup88Q8CEC0 753 aaKnown RBP12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Bcl2l12Q9D3J3 255 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ccne2Q9Z238 404 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Carmil3Q3UFQ8 1375 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Zfp51Q3U4L8 781 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Rnf214Q8BFU3 668 aaKnown RBP12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Samm50Q8BGH2 469 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Pdcl3Q8BVF2 240 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 AidaQ8C4Q6 305 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 ZwintQ9CQU5 252 aa12.04□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Anxa1P10107 346 aaKnown RBP12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Znf692Q3U381 531 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Babam1Q3UI43 333 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Il17raQ60943 864 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ankrd23Q812A3 306 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 BrapQ99MP8 591 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Sytl4Q9R0Q1 673 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 IncenpQ9WU62 880 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Cfap44E9Q5M6 1843 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Sik3Q6P4S6 1311 aa12.03□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Spata31d1bE9QA57 1361 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Prr5lA2AVJ5 370 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Fam184aE9PW83 1143 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 TrdnE9Q9K5 693 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Atp2b3Q0VF55 1220 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 BcanQ61361 883 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Nap1l3Q794H2 544 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Fam160b2Q80YR2 744 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Fez1Q8K0X8 392 aa12.02□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Dhx16G3X8X0 1044 aaKnown RBP12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Plekhf1Q3TB82 279 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Casc1Q6TDU8 730 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ano1Q8BHY3 960 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ncaph2Q8BSP2 607 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ift57Q8BXG3 429 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Zfp317Q8C0Q5 607 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Plcd1Q8R3B1 756 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Trim59Q922Y2 403 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Appbp2Q9DAX9 585 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Fbxo3Q9DC63 480 aa12.02□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Lama4P97927 1816 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Cnnm3Q32NY4 713 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Limch1Q3UH68 1057 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Slc38a10Q5I012 1090 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Edrf1Q6GQV7 1239 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Rab3gap1Q80UJ7 981 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Rassf8Q8CJ96 419 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Srgap1Q91Z69 1062 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Chd1lQ9CXF7 900 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ube3bQ9ES34 1070 aa12.01□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Klhl34A2AI76 644 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Sept1P42209 366 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Pald1P70261 859 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Itga6Q61739 1091 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ddrgk1Q80WW9 315 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Tmem67Q8BR76 992 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ndufa8Q9DCJ5 172 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Kcnn1Q9EQR3 537 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Sh3bp5Q9Z131 463 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Bin2D3Z6Q9 489 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Pde8bE9Q4S1 865 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Rgs9O54828 675 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Plbd2Q3TCN2 594 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Nlrp9aQ66X03 949 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms