RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Zfp804bA0A0G2JGH6 1343 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Ppfibp2O35711 882 aa12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Atp1b3P97370 278 aa12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 ZyxQ62523 564 aa12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Tmem67Q8BR76 992 aa12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Iffo2Q8R2V2 512 aa12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Pes1Q9EQ61 584 aaKnown RBP12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 AidaQ8C4Q6 305 aa12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Shank3Q4ACU6 1730 aa12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Nwd2Q6P5U7 1742 aa12.82□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Pde4bB1AWC9 736 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Nlrp9aQ66X03 949 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Sp8Q8BMJ8 486 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Naa30Q8CES0 364 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Tbc1d4Q8BYJ6 1307 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Nphp3Q7TNH6 1325 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Ythdc1E9Q5K9 736 aaKnown RBP12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Slurp2P0DP59 97 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Casp1P29452 402 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Dbndd1Q9CZ00 160 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Psma5Q9Z2U1 241 aaKnown RBP12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Il4rP16382 810 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Pla2g4fQ50L41 855 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Ccdc158Q8CDI6 1109 aa12.81□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Kcnb2A6H8H5 907 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Eva1cP58659 440 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Hspd1P63038 573 aaKnown RBP12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Ddx19aQ61655 478 aaKnown RBP12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Rps6kb1Q8BSK8 525 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Cchcr1Q8K2I2 770 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Dnttip2Q8R2M2 758 aaKnown RBP12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Pde8bE9Q4S1 865 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Emilin2Q8K482 1074 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Rdm1Q9CQK3 281 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Cyp3a57D3YYZ0 503 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Cct2P80314 535 aaKnown RBP12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Atp8a2P98200 1148 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Tmem143Q8VD26 458 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Bmp2kQ91Z96 1138 aa12.8□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 InhbeO08717 350 aa12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Lrit1Q8K099 624 aa12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Stx6Q9JKK1 255 aa12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Zbtb22Q9Z0G7 638 aa12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Tlr8P58682 1032 aa12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Edrf1Q6GQV7 1239 aa12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Map10Q8BJS7 891 aa12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Ufl1Q8CCJ3 793 aaKnown RBP12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Plekho1Q9JIY0 408 aa12.79□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Slc38a10Q5I012 1090 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Snrpa1P57784 255 aaKnown RBP12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 CgnP59242 1191 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Snai1Q02085 264 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 IntuQ059U7 942 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Znf496Q5SXI5 585 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Marf1Q8BJ34 1730 aaKnown RBP12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Taok3Q8BYC6 898 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Ctdnep1Q3TP92 244 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Slc39a11Q8BWY7 342 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 DpydQ8CHR6 1025 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Rps6ka4Q9Z2B9 773 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 PappaQ8R4K8 1624 aa12.78□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Ccdc66Q6NS45 935 aa12.77□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Fam160b2Q80YR2 744 aa12.77□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Gm9992B2RWK3 458 aa12.77□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Vps33bP59016 617 aa12.77□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Washc4Q3UMB9 1173 aa12.77□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Unc93aQ710D3 458 aa12.77□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Fkbp1aP26883 108 aaKnown RBP12.77□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Sept1P42209 366 aa12.77□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Hmg20bQ9Z104 317 aa12.77□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Fer1l6E0CZ42 1862 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Npc1l1Q6T3U4 1333 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 PtmaP26350 111 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Pcmtd1P59913 357 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Usp44Q8C2S0 711 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Pms1Q8K119 917 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Myh1Q5SX40 1942 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Syce3B5KM66 88 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Cyp2d9P11714 504 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Acap3Q6NXL5 833 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Ift57Q8BXG3 429 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Tmx3Q8BXZ1 456 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Kdm3aQ6PCM1 1323 aa12.76□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 1700029H14RikE9PY36 240 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Cyp2d34L7N463 504 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Rnf214Q8BFU3 668 aaKnown RBP12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 PtmsQ9D0J8 101 aaKnown RBP12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Sil1Q9EPK6 465 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 IcoslgQ9JHJ8 322 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Speer4dL7N216 212 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Gimap8Q75N62 688 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Me3Q8BMF3 604 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 4931408C20RikE9PWP9 1381 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 FanccP50652 591 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Plbd2Q3TCN2 594 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Fsd1Q7TPM6 496 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 HmcesQ8R1M0 353 aaKnown RBP12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Gja10Q9WUS4 505 aa12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Mybbp1aQ7TPV4 1344 aaKnown RBP12.75□□□□□ -0.37
Pcdh20-202ENSMUST00000192557 Zbtb7aO88939 569 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms