RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Zfyve9A2A8R0 1397 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 ZyxQ62523 564 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ift57Q8BXG3 429 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Trim44Q9QXA7 346 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ubn2Q80WC1 1314 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Phactr2B1AVP0 632 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Rbm26Q6NZN0 1012 aaKnown RBP12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Fam160b2Q80YR2 744 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Duox1A2AQ92 1551 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Speer4dL7N216 212 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Plekhf1Q3TB82 279 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Tmem143Q8VD26 458 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Riok1Q922Q2 567 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Cyp27a1Q9DBG1 533 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 Gja10Q9WUS4 505 aa12.93□□□□□ -0.34
Lig3-212ENSMUST00000173727 1700029H14RikE9PY36 240 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ube4aE9Q735 1028 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Sept1P42209 366 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 NpeppsQ11011 920 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Arid3aQ62431 601 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Bmp2kQ91Z96 1138 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Sf3b3Q921M3 1217 aaKnown RBP12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Npc1l1Q6T3U4 1333 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Rbm8a2A0A0N4SUH6 174 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Fbln2P37889 1221 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Kiaa0753Q6A000 959 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Nek11Q8C0Q4 628 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Erc1Q99MI1 1120 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Rbm8aQ9CWZ3 174 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Cyp3a57D3YYZ0 503 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Nlrp9aQ66X03 949 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Fbxo41Q6NS60 873 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ak2Q9WTP6 239 aa12.92□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ubr3Q5U430 1889 aa12.91□□□□□ -0.34
Lig3-212ENSMUST00000173727 IbspQ61711 324 aa12.91□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ppp4r3bQ922R5 820 aa12.91□□□□□ -0.34
Lig3-212ENSMUST00000173727 Tlr8P58682 1032 aa12.91□□□□□ -0.34
Lig3-212ENSMUST00000173727 Kif20aP97329 887 aa12.91□□□□□ -0.34
Lig3-212ENSMUST00000173727 Sptlc3Q8BG54 563 aa12.91□□□□□ -0.34
Lig3-212ENSMUST00000173727 Col22a1E9Q7P1 1613 aa12.91□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ubxn10Q8BG34 277 aa12.9□□□□□ -0.34
Lig3-212ENSMUST00000173727 Slc39a11Q8BWY7 342 aa12.9□□□□□ -0.34
Lig3-212ENSMUST00000173727 Setdb1O88974 1307 aa12.9□□□□□ -0.34
Lig3-212ENSMUST00000173727 Gm4340L7N2C4 268 aa12.9□□□□□ -0.34
Lig3-212ENSMUST00000173727 MeiocA2AG06 965 aa12.9□□□□□ -0.34
Lig3-212ENSMUST00000173727 Smarce1O54941 411 aaKnown RBP12.9□□□□□ -0.34
Lig3-212ENSMUST00000173727 GabrdP22933 449 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 StrbpQ91WM1 672 aaKnown RBP12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Popdc2Q9ES82 367 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Pus3Q9JI38 481 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Add2Q9QYB8 725 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Casq1O09165 405 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Prl3d1P18121 224 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 EvcP57680 1005 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Rnf20Q5DTM8 973 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Znf496Q5SXI5 585 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Pdzrn3Q69ZS0 1063 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 4933402E13RikQ9D4D2 429 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Znfx1Q8R151 1909 aaKnown RBP12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Gm7347D3YYI9 267 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Speer4aF8VPX6 267 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Ints3Q7TPD0 1041 aaKnown RBP12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 KinQ8K339 391 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Sumf1Q8R0F3 372 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Akt1s1Q9D1F4 257 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 CpvlQ9D3S9 478 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Slx4ipQ9D7Y9 413 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Ube3bQ9ES34 1070 aa12.89□□□□□ -0.35
Lig3-212ENSMUST00000173727 Gjb2Q00977 226 aa12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Mb21d2Q8C525 428 aa12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Ufl1Q8CCJ3 793 aaKnown RBP12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Rbm17Q8JZX4 405 aaKnown RBP12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Sde2Q8K1J5 448 aaKnown RBP12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Col11a2Q64739 1736 aa12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 NppbP40753 121 aa12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 IncenpQ9WU62 880 aa12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Rsph3aQ3UFY4 516 aa12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Abtb2Q7TQI7 1024 aa12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Dmrtc1Q9D9R7 182 aa12.88□□□□□ -0.35
Lig3-212ENSMUST00000173727 Ugt1a5B2RT14 529 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 IntuQ059U7 942 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Rbm5Q91YE7 815 aaKnown RBP12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Filip1lQ6P6L0 1131 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 PogkQ80TC5 607 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Polr3dQ91WD1 398 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Chmp4cQ9D7F7 232 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Naa16Q9DBB4 864 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Sh3tc1G3X9F6 1346 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Col3a1P08121 1464 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Rps8P62242 208 aaKnown RBP12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Utp18Q5SSI6 552 aaKnown RBP12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Rrp12Q6P5B0 1295 aaKnown RBP12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Lmbrd2Q8C561 694 aa12.87□□□□□ -0.35
Lig3-212ENSMUST00000173727 Cyp2d10P24456 504 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Atp6v1dP57746 247 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Kank4Q6P9J5 1016 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Sgsm2Q80U12 1005 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Atf7Q8R0S1 413 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 McamQ8R2Y2 648 aaKnown RBP12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Lrrfip2Q91WK0 415 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms