RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Egfl6Q9JJZ5 550 aa16.77■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Zkscan4Q5SZT6 480 aa16.77■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 MarcksP26645 309 aaKnown RBP16.77■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Kif2aP28740 705 aa16.77■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Nap1l4Q78ZA7 375 aaKnown RBP16.77■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Myo1bP46735 1107 aa16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 CebpzP53569 1052 aaKnown RBP16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Trappc8E9PWG2 1437 aa16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 BC005561E9Q5E2 1589 aa16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 PtprgQ05909 1442 aa16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Asic1Q6NXK8 526 aa16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Rtn1Q8K0T0 780 aa16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Rbm19Q8R3C6 952 aaKnown RBP16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ccdc94Q9D6J3 314 aa16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ak2Q9WTP6 239 aa16.76■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Tnnc1P19123 161 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Sun3Q5SS91 320 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Specc1Q5SXY1 1067 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 3425401B19RikD3Z1D3 1412 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Tti2Q8BGV4 512 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ier5O89113 308 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ttc14Q9CSP9 761 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 DmtnQ9WV69 405 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Tbc1d8Q9Z1A9 1134 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Edc4Q3UJB9 1406 aaKnown RBP16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Tmem132eQ6IEE6 982 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Liat1Q810M6 228 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Tmx4Q8C0L0 335 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Amotl2Q8K371 772 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Cyp2ab1S4R196 498 aa16.75■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Cfap74Q3UY96 1578 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Supt6hQ62383 1726 aaKnown RBP16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Efhd1Q9D4J1 240 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Serpinb6bO08804 377 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Gna11P21278 359 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Neurog2P70447 263 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Top1Q04750 767 aaKnown RBP16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ifit2Q64112 472 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ankrd50F7BE84 1390 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Palm3A2TJV2 734 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ppfibp2O35711 882 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Dclk3Q8BWQ5 790 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Zbtb3Q91X45 518 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Arfgap2Q99K28 520 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Chd1lQ9CXF7 900 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Talpid3E9PV87 1520 aa16.74■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Map7d1A2AJI0 846 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Znf394Q9Z1D9 521 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Shroom2A2ALU4 1481 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Epb41l2O70318 988 aaKnown RBP16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ercc3P49135 783 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Pdzrn3Q69ZS0 1063 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Senp1P59110 640 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 RestQ8VIG1 1082 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Dync1i1O88485 628 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ccnl1Q52KE7 532 aaKnown RBP16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Hdac9Q99N13 588 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Noc2lQ9WV70 747 aaKnown RBP16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Mx2Q9WVP9 655 aa16.73■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 PalldQ9ET54 1408 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Wdr7Q920I9 1489 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Opa1P58281 960 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Tubb2aQ7TMM9 445 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Bicc1Q99MQ1 977 aaKnown RBP16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Tubb2bQ9CWF2 445 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 SsbP32067 415 aaKnown RBP16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Dact3Q0PHV7 610 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Eif3j1Q3UGC7 261 aaKnown RBP16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Eif3j2Q66JS6 263 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ccdc148Q6P5U8 527 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Taok3Q8BYC6 898 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Pym1Q8CHP5 203 aaKnown RBP16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Tceanc2Q8R2M0 207 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ankrd40Q5SUE8 363 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Ankrd13dQ6PD24 605 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Maip1Q8BHE8 291 aa16.72■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Gjc1P28229 396 aa16.71■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Mcm6P97311 821 aa16.71■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Stk36Q69ZM6 1316 aa16.71■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Larp6Q8BN59 492 aa16.71■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Olfm5Q8BU90 496 aa16.71■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Arhgef6Q8K4I3 771 aa16.71■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Cep19Q9CQA8 163 aa16.71■□□□□ 0.27
Pcdh20-201ENSMUST00000061628 Skint5A7XUY5 1461 aa16.71■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Dzip1lQ499E4 774 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Apol10bG3X9K7 334 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Bloc1s4Q8VED2 215 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Smarcc2Q6PDG5 1213 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Frat2Q8K025 231 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Sde2Q8K1J5 448 aaKnown RBP16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Pik3ap1Q9EQ32 811 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Lrrc9Q8CDN9 1456 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Gm1993A6X8I0 212 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 SlxD3Z347 212 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Letm1Q9Z2I0 738 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Adgrl2Q8JZZ7 1487 aa16.7■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Cyp4f39Q8BGU0 532 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ncaph2Q8BSP2 607 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Cdca7Q9D0M2 382 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 DonsonQ9QXP4 560 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms