RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Cyp19a1P28649 503 aa15.05■□□□□ -0
Rnf4-201ENSMUST00000030992 Pcmtd1P59913 357 aa15.05■□□□□ -0
Rnf4-201ENSMUST00000030992 Lmbrd2Q8C561 694 aa15.05■□□□□ -0
Rnf4-201ENSMUST00000030992 Ncoa5Q91W39 579 aaKnown RBP15.05■□□□□ -0
Rnf4-201ENSMUST00000030992 Ush1cQ9ES64 910 aa15.05■□□□□ -0
Rnf4-201ENSMUST00000030992 Pde3aQ9Z0X4 1141 aa15.05■□□□□ -0
Rnf4-201ENSMUST00000030992 Plcb3P51432 1234 aaKnown RBP15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Fam84aQ9D650 292 aa15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Ndufa8Q9DCJ5 172 aa15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Add3Q9QYB5 706 aaKnown RBP15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Ssc5dQ8BV57 1371 aa15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Usp42B2RQC2 1324 aaKnown RBP15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Cyp3a57D3YYZ0 503 aa15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 TrdnE9Q9K5 693 aa15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Cfap73J3QPZ5 306 aa15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Mcm3P25206 812 aaKnown RBP15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Smg7Q5RJH6 1138 aaKnown RBP15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Srgap1Q91Z69 1062 aa15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Lrp6O88572 1613 aa15.04■□□□□ -0
Rnf4-201ENSMUST00000030992 Gm21985Q6P6P5 1106 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Ano1Q8BHY3 960 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Smim5Q8BT42 78 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Atad2Q8CDM1 1040 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Rbm17Q8JZX4 405 aaKnown RBP15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 TnksQ6PFX9 1320 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Cyp2d34L7N463 504 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Zfp317Q8C0Q5 607 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Kdm3aQ6PCM1 1323 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Wdr33Q8K4P0 1330 aaKnown RBP15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Ccdc162pQ0VG85 912 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Gnl3lQ6PGG6 577 aaKnown RBP15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Shisa4Q8CA71 197 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Ppp4r3bQ922R5 820 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 BrapQ99MP8 591 aa15.03■□□□□ -0
Rnf4-201ENSMUST00000030992 Kndc1Q0KK55 1742 aa15.02■□□□□ -0
Rnf4-201ENSMUST00000030992 Ftl2P49945 183 aa15.02■□□□□ -0
Rnf4-201ENSMUST00000030992 Limch1Q3UH68 1057 aa15.02■□□□□ -0
Rnf4-201ENSMUST00000030992 Mindy4Q3UQI9 744 aa15.02■□□□□ -0
Rnf4-201ENSMUST00000030992 Adam1aQ60813 791 aa15.02■□□□□ -0
Rnf4-201ENSMUST00000030992 Trim56Q80VI1 734 aaKnown RBP15.02■□□□□ -0
Rnf4-201ENSMUST00000030992 ApobrQ8VBT6 942 aa15.02■□□□□ -0
Rnf4-201ENSMUST00000030992 Lrp5Q91VN0 1614 aa15.02□□□□□ -0.01
Rnf4-201ENSMUST00000030992 TsksO54887 585 aa15.02□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Becn1O88597 448 aa15.02□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Bach2P97303 839 aa15.02□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Lins1Q3U1D0 764 aa15.02□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Ltv1Q6NSQ7 470 aaKnown RBP15.02□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Trim59Q922Y2 403 aa15.02□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Krt85Q9Z2T6 507 aa15.02□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Col3a1P08121 1464 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Atp8a2P98200 1148 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Ubash3aQ3V3E1 624 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 AidaQ8C4Q6 305 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Hdac6Q9Z2V5 1149 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Myh7Q91Z83 1935 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Adcy5P84309 1262 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Igflr1Q3U4N7 345 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Ttc27Q8CD92 847 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 MetP16056 1379 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Carmil3Q3UFQ8 1375 aa15.01□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Ankrd31A0A140LI88 1765 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Lnx1O70263 728 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Csrnp1P59054 583 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Ncaph2Q8BSP2 607 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Iffo2Q8R2V2 512 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Rgs9O54828 675 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Snx13Q6PHS6 957 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Map10Q8BJS7 891 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Rassf8Q8CJ96 419 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Kcnq5Q9JK45 933 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Mx2Q9WVP9 655 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Ccne2Q9Z238 404 aa15□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Gpr182P43142 395 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Usp25P57080 1055 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Tbc1d31Q6NXY1 996 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Dcaf5Q80T85 946 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Sh3bp5Q9Z131 463 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Mrpl44Q9CY73 333 aaKnown RBP14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Sik3Q6P4S6 1311 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 CgnP59242 1191 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Gzf1Q4VBD9 706 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Nxf7Q80SZ6 620 aaKnown RBP14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Zkscan8Q8BSL0 588 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Mknk2Q8CDB0 459 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 GptQ8QZR5 496 aa14.99□□□□□ -0.01
Rnf4-201ENSMUST00000030992 1700113H08RikE9Q9Q5 327 aa14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Pald1P70261 859 aa14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Nol10Q5RJG1 687 aaKnown RBP14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Nip7Q9CXK8 180 aaKnown RBP14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Utp3Q9JI13 469 aaKnown RBP14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 IncenpQ9WU62 880 aa14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Fkbp1aP26883 108 aaKnown RBP14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Tmem109Q3UBX0 243 aa14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Usp28Q5I043 1051 aa14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 R3hcc1Q8BSI6 488 aa14.98□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Tpm2P58774 284 aa14.97□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Tmem67Q8BR76 992 aa14.97□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Pms1Q8K119 917 aa14.97□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Tyro3P55144 880 aa14.97□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Hvcn1Q3U2S8 269 aa14.97□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms