RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Rnf20Q5DTM8 973 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Sptlc3Q8BG54 563 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Shisa4Q8CA71 197 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Cchcr1Q8K2I2 770 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Rdm1Q9CQK3 281 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Sept12Q9D451 317 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Npc1l1Q6T3U4 1333 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Mybbp1aQ7TPV4 1344 aaKnown RBP10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 4931408C20RikE9PWP9 1381 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Hspd1P63038 573 aaKnown RBP10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Ctdnep1Q3TP92 244 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Plch1Q4KWH5 1682 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 EappQ5BU09 281 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Map10Q8BJS7 891 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Erc1Q99MI1 1120 aa10.89□□□□□ -0.67
Cldn1-201ENSMUST00000023154 PtmaP26350 111 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Edrf1Q6GQV7 1239 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Stx6Q9JKK1 255 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Hmg20bQ9Z104 317 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Psma5Q9Z2U1 241 aaKnown RBP10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Eef2kO08796 724 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Plekhf1Q3TB82 279 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Ifit1bl2Q3U687 466 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 VeztQ3ZK22 780 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Slc38a10Q5I012 1090 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Emilin1Q99K41 1017 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 PtmsQ9D0J8 101 aaKnown RBP10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Trim34bJ3QNR8 485 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 ImpactO55091 318 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Usp48Q3V0C5 1052 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Ppil4Q9CXG3 492 aaKnown RBP10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Popdc2Q9ES82 367 aa10.88□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Irgm2A0A140LIF8 407 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Cyp2d34L7N463 504 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Rassf8Q8CJ96 419 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Kcnq5Q9JK45 933 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Myh7Q91Z83 1935 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Pde8bE9Q4S1 865 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Snai1Q02085 264 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Babam1Q3UI43 333 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Ccar2Q8VDP4 922 aaKnown RBP10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Trim44Q9QXA7 346 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 C4bP01029 1738 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Kdm3aQ6PCM1 1323 aa10.87□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Cyp2d9P11714 504 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Sept1P42209 366 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 FanccP50652 591 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Mctp2Q5RJH2 878 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Ccdc158Q8CDI6 1109 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Naa30Q8CES0 364 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Trim34aQ99PP6 485 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 4933402E13RikQ9D4D2 429 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Sytl4Q9R0Q1 673 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Rps6ka4Q9Z2B9 773 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Cfap44E9Q5M6 1843 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Nlrp9aQ66X03 949 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Q8BT18 775 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 MypopQ8R4U1 393 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Gm13023A2A8N2 498 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Sema6bO54951 886 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 AidaQ8C4Q6 305 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Gripap1Q8VD04 806 aa10.86□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Smarcc1P97496 1104 aa10.85□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Hand2Q61039 217 aa10.85□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Ppfia3P60469 1194 aa10.85□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Ift57Q8BXG3 429 aa10.85□□□□□ -0.67
Cldn1-201ENSMUST00000023154 SowahdQ8BY98 327 aa10.85□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Phf14Q9D4H9 881 aa10.85□□□□□ -0.67
Cldn1-201ENSMUST00000023154 NgdnQ9DB96 315 aaKnown RBP10.85□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Fbxl16A2RT62 479 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Fam160b2Q80YR2 744 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Me3Q8BMF3 604 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Col3a1P08121 1464 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Usp42B2RQC2 1324 aaKnown RBP10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Tmem67Q8BR76 992 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Slc39a11Q8BWY7 342 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Syce3B5KM66 88 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Plbd2Q3TCN2 594 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Mad1l1Q9WTX8 717 aaKnown RBP10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Mapk8ip1Q9WVI9 707 aa10.84□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Exosc10P56960 887 aaKnown RBP10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Snrpa1P57784 255 aaKnown RBP10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Wdr93Q402B2 695 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Znf496Q5SXI5 585 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Spty2d1Q68FG3 682 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Paxip1Q6NZQ4 1056 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Ipo4Q8VI75 1082 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Tktl2Q9D4D4 627 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Scn11aQ9R053 1765 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 CltaO08585 235 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Cd22P35329 862 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Atp1b3P97370 278 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Zc3h12cQ5DTV4 884 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Ccdc66Q6NS45 935 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Zfp113Q8C689 439 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Ppp4r3bQ922R5 820 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Rbm33Q9CXK9 1231 aaKnown RBP10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 4931400O07RikQ9D4M5 137 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Appbp2Q9DAX9 585 aa10.83□□□□□ -0.68
Cldn1-201ENSMUST00000023154 Ube3bQ9ES34 1070 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms