RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Plekhg1F6S200 1446 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Epb41l2O70318 988 aaKnown RBP12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tubb4bP68372 445 aaKnown RBP12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 EappQ5BU09 281 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Klhdc4Q921I2 584 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Map3k13Q1HKZ5 959 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Bbof1Q3V079 533 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Dzip1lQ499E4 774 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tti2Q8BGV4 512 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ccdc158Q8CDI6 1109 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ccdc170D3YXL0 722 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Speer4f2E9Q366 295 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Api5O35841 504 aaKnown RBP12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ptgs1P22437 602 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Zkscan4Q5SZT6 480 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tmem87bQ8BKU8 555 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Cdca7Q9D0M2 382 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ppp1r3fQ9JIG4 799 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Speer3W4VSP1 261 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rbm8a2A0A0N4SUH6 174 aa12.33□□□□□ -0.43
Ciita-201ENSMUST00000023147 Oas2E9Q9A9 742 aa12.33□□□□□ -0.43
Ciita-201ENSMUST00000023147 Chpf2Q3UU43 768 aa12.33□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ppp1r10Q80W00 888 aaKnown RBP12.33□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rbm8aQ9CWZ3 174 aa12.33□□□□□ -0.43
Ciita-201ENSMUST00000023147 Serpinb6bO08804 377 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Prpf40aQ9R1C7 953 aaKnown RBP12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Abca8bQ8K440 1620 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Atg4a-psA0A0G2JFS9 396 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 GmnnO88513 206 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Mctp2Q5RJH2 878 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Fam204aQ8C6C7 236 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Atg4aQ8C9S8 396 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ttc27Q8CD92 847 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Brd3Q8K2F0 726 aaKnown RBP12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Kcnh5Q920E3 988 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Med14A2ABV5 1459 aaKnown RBP12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Depdc5P61460 1591 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Traf3ip1Q149C2 625 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Gbp8Q2V6D6 525 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Zfp51Q3U4L8 781 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 SfswapQ3USH5 945 aaKnown RBP12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Rufy3Q9D394 469 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 NhsB1AV60 1647 aa12.33□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ces1hD3Z298 562 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 TrdnE9Q9K5 693 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 NmiO35309 314 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Cfap100Q80VN0 613 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ptch1Q61115 1434 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Map3k19E9Q3S4 1311 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Bicdl1A0JNT9 577 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ces1aE9PYP1 563 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Vwa3bJ9JI28 736 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Caprin2Q05A80 1031 aaKnown RBP12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Spg7Q3ULF4 781 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Gbp7Q91Z40 638 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Tmod2Q9JKK7 351 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ccdc6D3YZP9 469 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Sdc2P43407 202 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Clul1Q3ZRW6 464 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Znf526Q8BI66 675 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Vps36Q91XD6 386 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Zkscan5Q9Z1D8 819 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 RbsnQ80Y56 783 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ccdc73Q8CDM4 1066 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Paip2Q9D6V8 124 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Fbxo3Q9DC63 480 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Uchl5Q9WUP7 329 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ubn2Q80WC1 1314 aa12.32□□□□□ -0.44
Ciita-201ENSMUST00000023147 Eif4a2P10630 407 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Zhx1P70121 873 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Fam83gQ5SWY7 812 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Rad17Q6NXW6 688 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ift74Q8BKE9 600 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 AU022751B1B0V2 589 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Snx25Q3ZT31 840 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ifit2Q64112 472 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 NpatQ8BMA5 1420 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Rassf4Q8CB96 322 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 SfpqQ8VIJ6 699 aaKnown RBP12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Sparcl1P70663 650 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Q9D5Q8 446 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Pde3aQ9Z0X4 1141 aa12.31□□□□□ -0.44
Ciita-201ENSMUST00000023147 Cdr1E9Q0B4 517 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Fam76aQ922G2 307 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Naip7Q9JIB3 1402 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Clec11aO88200 328 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Gigyf1Q99MR1 1044 aaKnown RBP12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Synj2Q9D2G5 1434 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Zfyve16Q80U44 1528 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Sh2d4bA6X942 431 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ier5O89113 308 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Irf9Q61179 399 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ampd3O08739 766 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Hook2Q7TMK6 716 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ssx2ipQ8VC66 615 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Ndufa8Q9DCJ5 172 aa12.3□□□□□ -0.44
Ciita-201ENSMUST00000023147 Arhgap23Q69ZH9 1483 aa12.29□□□□□ -0.44
Ciita-201ENSMUST00000023147 Rrs1Q9CYH6 365 aaKnown RBP12.29□□□□□ -0.44
Ciita-201ENSMUST00000023147 Svs3aF2Z472 265 aa12.29□□□□□ -0.44
Ciita-201ENSMUST00000023147 Scaf1Q5U4C3 1256 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms