RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Ano10Q8BH79 659 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Cadps2Q8BYR5 1297 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Bloc1s4Q8VED2 215 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 RragbQ6NTA4 374 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Ift122Q6NWV3 1182 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Lman1Q9D0F3 517 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Rufy3Q9D394 469 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Atp8b3Q6UQ17 1335 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 SlmapQ3URD3 845 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Rad17Q6NXW6 688 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Arhgef11Q68FM7 1552 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Casp1P29452 402 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 IntuQ059U7 942 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Ctr9Q62018 1173 aaKnown RBP16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Iffo1Q8BXL9 562 aa16.03■□□□□ 0.16
Col1a1-201ENSMUST00000001547 TchpQ3TVW5 497 aa16.02■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Psmd1Q3TXS7 953 aa16.02■□□□□ 0.16
Col1a1-201ENSMUST00000001547 GlmnQ8BZM1 596 aa16.02■□□□□ 0.16
Col1a1-201ENSMUST00000001547 GnaqP21279 359 aa16.02■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Uchl5Q9WUP7 329 aa16.02■□□□□ 0.16
Col1a1-201ENSMUST00000001547 Paxbp1P58501 919 aa16.02■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Myl6bQ8CI43 207 aa16.02■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Krt79Q8VED5 531 aa16.02■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Calml4Q91WQ9 153 aa16.02■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Stk36Q69ZM6 1316 aa16.02■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Cep135Q6P5D4 1140 aa16.02■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Matr3Q8K310 846 aaKnown RBP16.02■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Rrbp1Q99PL5 1605 aaKnown RBP16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Ppfibp2O35711 882 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Sept7O55131 436 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Cetn1P41209 172 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Nucb2P81117 420 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Vps54Q5SPW0 977 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 LarsQ8BMJ2 1178 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Acbd3Q8BMP6 525 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Hook3Q8BUK6 718 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Slc39a6Q8C145 765 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Dph6Q9CQ28 267 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Cyp2ab1S4R196 498 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Sptlc2P97363 560 aaKnown RBP16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Sun3Q5SS91 320 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 BrapQ99MP8 591 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Paip2Q9D6V8 124 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Zkscan16A2ALW2 728 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Zfp42P22227 288 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Pla2g4fQ50L41 855 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Pram1Q6BCL1 675 aa16.01■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Rtn1Q8K0T0 780 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Xrcc4Q924T3 326 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Gdpd2Q9ESM6 539 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Syt10Q9R0N4 523 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Snrpa1P57784 255 aaKnown RBP16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Abtb2Q7TQI7 1024 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Ginm1Q91WR6 327 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Tmod2Q9JKK7 351 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Cfap157Q0VFX2 523 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Vps37cQ8R105 352 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Lmo7E9PYF4 1699 aaKnown RBP16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Esyt1Q3U7R1 1092 aaKnown RBP16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Ccdc122Q8BVN0 290 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Sept6Q9R1T4 434 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Calm1P0DP26 149 aaKnown RBP16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Calm2P0DP27 149 aaKnown RBP16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Calm3P0DP28 149 aaKnown RBP16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 CebpzP53569 1052 aaKnown RBP16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Nop53Q8BK35 484 aaKnown RBP16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Mlh1Q9JK91 760 aa16■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Myo1bP46735 1107 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Egfem1Q8C088 590 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Gm16486A0A1D5RMD1 1434 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Ift88Q61371 824 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 SphkapQ6NSW3 1687 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Cops6O88545 324 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Myl3P09542 204 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Ankrd40Q5SUE8 363 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Naa15Q80UM3 865 aaKnown RBP15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Gng11P61953 73 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Zbtb45Q52KG4 520 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Ctnna2Q61301 953 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Klhl30Q8C3F7 581 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Irs4Q9Z0Y7 1216 aa15.99■□□□□ 0.15
Col1a1-201ENSMUST00000001547 MarcksP26645 309 aaKnown RBP15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Fam107bQ3TGF2 131 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Col17a1Q07563 1470 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Sycp2lA0A0M3U1B0 842 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 NmiO35309 314 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Chd1lQ9CXF7 900 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Epb41l3Q9WV92 929 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Eif3j1Q3UGC7 261 aaKnown RBP15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Eif3j2Q66JS6 263 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Tekt3Q6X6Z7 490 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Slain2Q8CI08 581 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Ccdc12Q8R344 166 aaKnown RBP15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Terf2ipQ91VL8 393 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Hsf2bpQ9D4G2 338 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Tyro3P55144 880 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Rnf216P58283 853 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Olfm5Q8BU90 496 aa15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Brd3Q8K2F0 726 aaKnown RBP15.98■□□□□ 0.15
Col1a1-201ENSMUST00000001547 Haus2Q9CQS9 234 aa15.98■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 78.7 ms