RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C SMC6Q12749 1114 aa9.54□□□□□ -0.88
PUP1YOR157C CDC6P09119 513 aa9.53□□□□□ -0.88
PUP1YOR157C CHS6P40955 746 aa9.53□□□□□ -0.88
PUP1YOR157C POL31P46957 487 aa9.53□□□□□ -0.88
PUP1YOR157C TUB4P53378 473 aa9.53□□□□□ -0.88
PUP1YOR157C HER2Q03557 464 aa9.53□□□□□ -0.88
PUP1YOR157C CDC53Q12018 815 aaKnown RBP9.53□□□□□ -0.88
PUP1YOR157C HRT3Q12347 344 aa9.53□□□□□ -0.88
PUP1YOR157C TCD2P36101 447 aaKnown RBP9.52□□□□□ -0.89
PUP1YOR157C PGM2P37012 569 aaKnown RBP9.52□□□□□ -0.89
PUP1YOR157C FAA3P39002 694 aa9.52□□□□□ -0.89
PUP1YOR157C HXT13P39924 564 aa9.52□□□□□ -0.89
PUP1YOR157C TAF1P46677 1066 aa9.52□□□□□ -0.89
PUP1YOR157C FYV8P46949 817 aaKnown RBP9.52□□□□□ -0.89
PUP1YOR157C ORC5P50874 479 aa9.52□□□□□ -0.89
PUP1YOR157C UTP8P53276 713 aaKnown RBP9.52□□□□□ -0.89
PUP1YOR157C IMP4P53941 290 aaKnown RBP9.52□□□□□ -0.89
PUP1YOR157C FUS2Q05670 677 aa9.52□□□□□ -0.89
PUP1YOR157C YPQ1Q12010 308 aa9.52□□□□□ -0.89
PUP1YOR157C CTF3Q12748 733 aa9.52□□□□□ -0.89
PUP1YOR157C TUF1P02992 437 aaKnown RBP9.51□□□□□ -0.89
PUP1YOR157C PPH22P23595 377 aa9.51□□□□□ -0.89
PUP1YOR157C SSD1P24276 1250 aaKnown RBP RIP-Chip data9.51□□□□□ -0.89not detected
PUP1YOR157C ISF1P32488 338 aa9.51□□□□□ -0.89
PUP1YOR157C PDR3P33200 976 aa9.51□□□□□ -0.89
PUP1YOR157C MMS4P38257 691 aa9.51□□□□□ -0.89
PUP1YOR157C SIP3P38717 1229 aa9.51□□□□□ -0.89
PUP1YOR157C NMA2P53204 395 aa9.51□□□□□ -0.89
PUP1YOR157C VTC3Q02725 835 aa9.51□□□□□ -0.89
PUP1YOR157C CEX1Q12453 761 aa9.51□□□□□ -0.89
PUP1YOR157C VPS3P23643 1011 aa9.5□□□□□ -0.89
PUP1YOR157C NAM7P30771 971 aaKnown RBP9.5□□□□□ -0.89
PUP1YOR157C GPI10P30777 616 aa9.5□□□□□ -0.89
PUP1YOR157C YBR056WP38081 501 aa9.5□□□□□ -0.89
PUP1YOR157C OPY1P38271 328 aa9.5□□□□□ -0.89
PUP1YOR157C RGD1P38339 666 aa9.5□□□□□ -0.89
PUP1YOR157C AIM9P40053 627 aaKnown RBP9.5□□□□□ -0.89
PUP1YOR157C KRI1P42846 591 aaKnown RBP9.5□□□□□ -0.89
PUP1YOR157C CDD1Q06549 142 aa9.5□□□□□ -0.89
PUP1YOR157C GCN1P33892 2672 aaKnown RBP9.49□□□□□ -0.89
PUP1YOR157C RPC53P25441 422 aa9.49□□□□□ -0.89
PUP1YOR157C STE5P32917 917 aa9.49□□□□□ -0.89
PUP1YOR157C TRM2P33753 639 aa9.49□□□□□ -0.89
PUP1YOR157C BCH2P36122 765 aa9.49□□□□□ -0.89
PUP1YOR157C YBL036CP38197 257 aa9.49□□□□□ -0.89
PUP1YOR157C BIM1P40013 344 aa9.49□□□□□ -0.89
PUP1YOR157C IES1P43579 692 aa9.49□□□□□ -0.89
PUP1YOR157C SDA1P53313 767 aaKnown RBP9.49□□□□□ -0.89
PUP1YOR157C UBP10P53874 792 aaPredicted RBP9.49□□□□□ -0.89
PUP1YOR157C ARP5P53946 755 aa9.49□□□□□ -0.89
PUP1YOR157C ADY4Q05955 493 aa9.49□□□□□ -0.89
PUP1YOR157C HSF1P10961 833 aa9.48□□□□□ -0.89
PUP1YOR157C FRS2P15625 503 aaKnown RBP9.48□□□□□ -0.89
PUP1YOR157C RAD16P31244 790 aa9.48□□□□□ -0.89
PUP1YOR157C SWE1P32944 819 aa9.48□□□□□ -0.89
PUP1YOR157C SLA2P33338 968 aa9.48□□□□□ -0.89
PUP1YOR157C STS1P38637 319 aa9.48□□□□□ -0.89
PUP1YOR157C SPO22P40511 975 aa9.48□□□□□ -0.89
PUP1YOR157C ROG3P43602 733 aa9.48□□□□□ -0.89
PUP1YOR157C RMD8P43620 662 aa9.48□□□□□ -0.89
PUP1YOR157C SEC5P89102 971 aa9.48□□□□□ -0.89
PUP1YOR157C JIP5Q06214 492 aaPredicted RBP9.48□□□□□ -0.89
PUP1YOR157C BSP1Q06604 576 aa9.48□□□□□ -0.89
PUP1YOR157C MATALPHA2P0CY08 210 aa9.47□□□□□ -0.89
PUP1YOR157C HMLALPHA2P0CY09 210 aa9.47□□□□□ -0.89
PUP1YOR157C GIP1P38229 639 aa9.47□□□□□ -0.89
PUP1YOR157C PCF11P39081 626 aaPredicted RBP9.47□□□□□ -0.89
PUP1YOR157C SCD6P45978 349 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89 RIP-Chip
PUP1YOR157C VPS25P47142 202 aa9.47□□□□□ -0.89
PUP1YOR157C YKE2P52553 114 aa9.47□□□□□ -0.89
PUP1YOR157C CBK1P53894 756 aa9.47□□□□□ -0.89
PUP1YOR157C YEL076C-AP0CX16 216 aa9.46□□□□□ -0.9
PUP1YOR157C YLR464WP0CX17 216 aa9.46□□□□□ -0.9
PUP1YOR157C VPS35P34110 944 aa9.46□□□□□ -0.9
PUP1YOR157C YEL076CP39971 216 aa9.46□□□□□ -0.9
PUP1YOR157C DOT6P40059 670 aaKnown RBP9.46□□□□□ -0.9
PUP1YOR157C YGR153WP48238 217 aa9.46□□□□□ -0.9
PUP1YOR157C YAT1P80235 687 aa9.46□□□□□ -0.9
PUP1YOR157C GCR2Q01722 534 aa9.46□□□□□ -0.9
PUP1YOR157C MTF1P14908 341 aaKnown RBP9.45□□□□□ -0.9
PUP1YOR157C PFK1P16861 987 aaKnown RBP9.45□□□□□ -0.9
PUP1YOR157C GAC1P28006 793 aa9.45□□□□□ -0.9
PUP1YOR157C RAM2P29703 316 aa9.45□□□□□ -0.9
PUP1YOR157C YSC83P32792 385 aa9.45□□□□□ -0.9
PUP1YOR157C MNN4P36044 1178 aa9.45□□□□□ -0.9
PUP1YOR157C TGL3P40308 642 aa9.45□□□□□ -0.9
PUP1YOR157C BTT1P40314 149 aaPredicted RBP9.45□□□□□ -0.9
PUP1YOR157C ASN1P49089 572 aaKnown RBP9.45□□□□□ -0.9
PUP1YOR157C TOF1P53840 1238 aa9.45□□□□□ -0.9
PUP1YOR157C TIP41Q12199 356 aa9.45□□□□□ -0.9
PUP1YOR157C PDC6P26263 563 aaKnown RBP9.44□□□□□ -0.9
PUP1YOR157C UTH1P36135 365 aa9.44□□□□□ -0.9
PUP1YOR157C OCA5P38738 679 aa9.44□□□□□ -0.9
PUP1YOR157C YHR054CP38780 354 aa9.44□□□□□ -0.9
PUP1YOR157C SHE10P53075 577 aa9.44□□□□□ -0.9
PUP1YOR157C GUP1P53154 560 aa9.44□□□□□ -0.9
PUP1YOR157C KRE33P53914 1056 aaKnown RBP9.44□□□□□ -0.9
PUP1YOR157C NDJ1Q12366 352 aa9.44□□□□□ -0.9
PUP1YOR157C YDL206WQ12424 762 aa9.44□□□□□ -0.9
PUP1YOR157C TPK1P06244 397 aa9.43□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms