RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP2	YOR124C	IRC3	Q06683	689 aa		2.22	□□□□□ -2.05
UBP2	YOR124C	FRA1	Q07825	749 aa		2.22	□□□□□ -2.05
UBP2	YOR124C	TUM1	Q08686	304 aa	Known RBP	2.22	□□□□□ -2.05
UBP2	YOR124C	MCH5	Q08777	521 aa		2.22	□□□□□ -2.05
UBP2	YOR124C	CEX1	Q12453	761 aa		2.22	□□□□□ -2.05
UBP2	YOR124C	PGK1	P00560	416 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	WHI2	P12611	486 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	HMG2	P12684	1045 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	ARG8	P18544	423 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	VAN1	P23642	535 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	XRS2	P33301	854 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	BUD6	P41697	788 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	YJL107C	P42947	387 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	VTC2	P43585	828 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	TRF5	P48561	642 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	ARO8	P53090	500 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	UBP16	Q02863	499 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	YDR090C	Q03193	310 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	DML1	Q03652	475 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	GTB1	Q04924	702 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	COQ9	Q05779	260 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	BDF2	Q07442	638 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	BUD7	Q08754	746 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	CFT2	Q12102	859 aa	Predicted RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	ENO1	P00924	437 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	ENO2	P00925	437 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	MTF2	P10849	440 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	POL3	P15436	1097 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	SFL1	P20134	766 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	KIP1	P28742	1111 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	GCD6	P32501	712 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	RIB7	P33312	244 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	SEC66	P33754	206 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	STE13	P33894	931 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	SLD2	P34252	453 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	SQT1	P35184	431 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	DSF2	P38213	736 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	TSC10	P38342	320 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	PMC1	P38929	1173 aa	Predicted RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	HAL5	P38970	855 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	SHC1	P39000	512 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	KAP123	P40069	1113 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	YJL055W	P47044	245 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	PSP1	P50896	841 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	RIM8	P53179	542 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	YGR021W	P53212	290 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	YNL108C	P53929	270 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	FUS2	Q05670	677 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	TRE1	Q08919	783 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	YOR289W	Q12012	251 aa	Predicted RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	SUI3	P09064	285 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	MIP1	P15801	1254 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	CKA2	P19454	339 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	DPB2	P24482	689 aa	Predicted RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	NUF2	P33895	451 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	SIP2	P34164	415 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	YBL055C	P34220	418 aa	Predicted RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	YBR242W	P38331	238 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	PRK1	P40494	810 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	SUM1	P46676	1062 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	ECL1	P48235	211 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	UTP22	P53254	1237 aa	Predicted RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	GIR2	Q03768	265 aa	Predicted RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	MYO5	Q04439	1219 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	RNH1	Q04740	348 aa		2.21	□□□□□ -2.06
UBP2	YOR124C	VIP1	Q06685	1146 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	TSR1	Q07381	788 aa	Known RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	SNU66	Q12420	587 aa	Predicted RBP	2.21	□□□□□ -2.06
UBP2	YOR124C	TY1B-A	O13527	1196 aa	Known RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	CLN3	P13365	580 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	YAK1	P14680	807 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	NCP1	P16603	691 aa	Known RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	MET4	P32389	672 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	BEM3	P32873	1128 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	KDX1	P36005	433 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	IFA38	P38286	347 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	FZO1	P38297	855 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	RPN10	P38886	268 aa	Known RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	HXT8	P40886	569 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	DIM1	P41819	318 aa	Known RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	EMW1	P42842	904 aa	Known RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	ROG3	P43602	733 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	URB2	P47108	1174 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	TAF6	P53040	516 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	SDA1	P53313	767 aa	Known RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	RET3	P53600	189 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	DAK1	P54838	584 aa	Known RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	URH1	Q04179	340 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	GAL83	Q04739	417 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	ATG17	Q06410	417 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	GPI13	Q07830	1017 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	AFT2	Q08957	416 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	SLM3	Q12093	417 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	GPM3	Q12326	303 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	CYB2	P00175	591 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	HXK1	P04806	485 aa	Known RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	ISY1	P21374	235 aa	Predicted RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	CHL1	P22516	861 aa	Predicted RBP	2.2	□□□□□ -2.06
UBP2	YOR124C	CNA1	P23287	553 aa		2.2	□□□□□ -2.06
UBP2	YOR124C	RAD14	P28519	371 aa		2.2	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms