RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	MSH6	Q03834	1242 aa		4	□□□□□ -1.77
LDS2	YOL047C	RPN7	Q06103	429 aa	Known RBP	4	□□□□□ -1.77
LDS2	YOL047C	YOR296W	Q08748	1289 aa		4	□□□□□ -1.77
LDS2	YOL047C	LYS2	P07702	1392 aa		4	□□□□□ -1.77
LDS2	YOL047C	PSK1	P31374	1356 aa		4	□□□□□ -1.77
LDS2	YOL047C	TY1B-BR	Q12193	1756 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	TY1B-GR3	Q12316	1755 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	TY1B-OR	Q92393	1755 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	MSS18	P08593	268 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	HSC82	P15108	705 aa	Known RBP	3.99	□□□□□ -1.77
LDS2	YOL047C	SAN1	P22470	610 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	URA1	P28272	314 aa	Predicted RBP	3.99	□□□□□ -1.77
LDS2	YOL047C	DOM34	P33309	386 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	PES4	P39684	611 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	DLD3	P39976	496 aa	Known RBP	3.99	□□□□□ -1.77
LDS2	YOL047C	TMA108	P40462	946 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	FAF1	P40546	346 aa	Predicted RBP	3.99	□□□□□ -1.77
LDS2	YOL047C	AAD14	P42884	376 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	ALG2	P43636	503 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	TAD1	P53065	400 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	NSG2	P53898	299 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	MOT3	P54785	490 aa	Known RBP	3.99	□□□□□ -1.77
LDS2	YOL047C	TIM50	Q02776	476 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	ERO1	Q03103	563 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	SXM1	Q04175	944 aa	Known RBP	3.99	□□□□□ -1.77
LDS2	YOL047C	TY1A-MR1	Q04215	440 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	PMT7	Q06644	662 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	TSR2	Q06672	205 aa	Known RBP	3.99	□□□□□ -1.77
LDS2	YOL047C	GUD1	Q07729	489 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	PSH1	Q12161	406 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	MED1	Q12321	566 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	YKL068W-A	Q3E826	78 aa		3.99	□□□□□ -1.77
LDS2	YOL047C	RPS31	P05759	152 aa	Known RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	YER152C	P10356	443 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	BIK1	P11709	440 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	SYP1	P25623	870 aa	Known RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	PER1	P25625	357 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	PPH3	P32345	308 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	ZUO1	P32527	433 aa	Known RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	SER1	P33330	395 aa	Known RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	SPC29	P33419	253 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	YBR238C	P38330	731 aa	Known RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	NMD3	P38861	518 aa	Known RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	ACA1	P39970	489 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	SIP5	P40210	489 aa	Known RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	YJR098C	P47139	656 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	PXR1	P53335	271 aa	Predicted RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	VPS20	Q04272	221 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	YMR018W	Q04364	514 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	ERV41	Q04651	352 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	NKP2	Q06162	153 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	YTM1	Q12024	460 aa	Predicted RBP	3.98	□□□□□ -1.77
LDS2	YOL047C	TCB1	Q12466	1186 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	RKM4	Q12504	494 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	RMP1	Q12530	201 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	RTP1	Q12751	981 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	NHA1	Q99271	985 aa		3.98	□□□□□ -1.77
LDS2	YOL047C	DOP1	Q03921	1698 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	BI4	P03879	638 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	RNR2	P09938	399 aa	Known RBP	3.97	□□□□□ -1.77
LDS2	YOL047C	HMG1	P12683	1054 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	NAT1	P12945	854 aa	Known RBP	3.97	□□□□□ -1.77
LDS2	YOL047C	PET123	P17558	318 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	STE11	P23561	717 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	HEM12	P32347	362 aa	Predicted RBP	3.97	□□□□□ -1.77
LDS2	YOL047C	DPH2	P32461	534 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
LDS2	YOL047C	MUD2	P36084	527 aa	Known RBP	3.97	□□□□□ -1.77
LDS2	YOL047C	PET10	P36139	283 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	BIT2	P38346	545 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	RIM11	P38615	370 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	OSH7	P38755	437 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	CKB2	P38930	258 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	VPS8	P39702	1274 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	DUG1	P43616	481 aa	Known RBP	3.97	□□□□□ -1.77
LDS2	YOL047C	SRB7	P47822	140 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	YGR153W	P48238	217 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	YNR063W	P53749	607 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	YDR338C	Q05497	695 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	UTP4	Q06679	776 aa	Known RBP	3.97	□□□□□ -1.77
LDS2	YOL047C	PSR2	Q07949	397 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	BNR1	P40450	1375 aa		3.97	□□□□□ -1.77
LDS2	YOL047C	CYB2	P00175	591 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	RPS21A	P0C0V8	87 aa	Known RBP	3.96	□□□□□ -1.78
LDS2	YOL047C	IDI1	P15496	288 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	PHO81	P17442	1178 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	MSM1	P22438	575 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	HSP104	P31539	908 aa	Known RBP	3.96	□□□□□ -1.78
LDS2	YOL047C	VMA8	P32610	256 aa	Known RBP	3.96	□□□□□ -1.78
LDS2	YOL047C	RDH54	P38086	958 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	YBL086C	P38177	466 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	UBS1	P38290	277 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	PCM1	P38628	557 aa	Known RBP	3.96	□□□□□ -1.78
LDS2	YOL047C	YAP3	P38749	330 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	APE4	P38821	490 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	YTA6	P40328	754 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	CCT5	P40413	562 aa	Known RBP	3.96	□□□□□ -1.78
LDS2	YOL047C	YIL165C	P40446	119 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	QRI7	P43122	407 aa		3.96	□□□□□ -1.78
LDS2	YOL047C	GYP8	P43570	497 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 128.4 ms