RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C YER152CP10356 443 aa2.12□□□□□ -2.07
SFB2YNL049C YBR284WP38150 797 aa2.12□□□□□ -2.07
SFB2YNL049C ALG14P38242 237 aa2.12□□□□□ -2.07
SFB2YNL049C ATG14P38270 344 aa2.12□□□□□ -2.07
SFB2YNL049C KSP1P38691 1029 aaKnown RBP2.12□□□□□ -2.07
SFB2YNL049C ATG36P46983 293 aa2.12□□□□□ -2.07
SFB2YNL049C HSV2P50079 448 aaPredicted RBP2.12□□□□□ -2.07
SFB2YNL049C ELA1P53861 379 aaPredicted RBP2.12□□□□□ -2.07
SFB2YNL049C UTP14Q04500 899 aaKnown RBP2.12□□□□□ -2.07
SFB2YNL049C YDR306CQ06640 478 aa2.12□□□□□ -2.07
SFB2YNL049C GNT1Q12096 491 aa2.12□□□□□ -2.07
SFB2YNL049C SLP1Q12232 587 aa2.12□□□□□ -2.07
SFB2YNL049C SSB1P11484 613 aaKnown RBP2.11□□□□□ -2.07
SFB2YNL049C SNA3P14359 133 aa2.11□□□□□ -2.07
SFB2YNL049C RPL8AP17076 256 aaKnown RBP2.11□□□□□ -2.07
SFB2YNL049C SAC7P17121 654 aa2.11□□□□□ -2.07
SFB2YNL049C DBP2P24783 546 aaKnown RBP2.11□□□□□ -2.07
SFB2YNL049C TOM20P35180 183 aa2.11□□□□□ -2.07
SFB2YNL049C CRP1P38845 465 aaKnown RBP2.11□□□□□ -2.07
SFB2YNL049C GDH3P39708 457 aa2.11□□□□□ -2.07
SFB2YNL049C YEN1P40028 759 aa2.11□□□□□ -2.07
SFB2YNL049C SSB2P40150 613 aaKnown RBP2.11□□□□□ -2.07
SFB2YNL049C YOL057WQ08225 711 aa2.11□□□□□ -2.07
SFB2YNL049C AVO1Q08236 1176 aa2.11□□□□□ -2.07
SFB2YNL049C CTI6Q08923 506 aa2.11□□□□□ -2.07
SFB2YNL049C FLO11P08640 1367 aa2.11□□□□□ -2.07
SFB2YNL049C CYB2P00175 591 aa2.11□□□□□ -2.07
SFB2YNL049C PRE10P21242 288 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SFB2YNL049C RAD53P22216 821 aa2.11□□□□□ -2.07
SFB2YNL049C MEF1P25039 761 aa2.11□□□□□ -2.07
SFB2YNL049C QNS1P38795 714 aaKnown RBP2.11□□□□□ -2.07
SFB2YNL049C PNT1P38969 423 aa2.11□□□□□ -2.07
SFB2YNL049C GUS1P46655 708 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SFB2YNL049C NCE103P53615 221 aa2.11□□□□□ -2.07
SFB2YNL049C RSA3Q05942 220 aaKnown RBP2.11□□□□□ -2.07
SFB2YNL049C SPP382Q06411 708 aaPredicted RBP2.11□□□□□ -2.07
SFB2YNL049C LAP2Q10740 671 aa2.11□□□□□ -2.07
SFB2YNL049C RPL11AP0C0W9 174 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C MSD1P15179 658 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C NFS1P25374 497 aa2.1□□□□□ -2.07
SFB2YNL049C KIP1P28742 1111 aa2.1□□□□□ -2.07
SFB2YNL049C MAE1P36013 669 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C NMD3P38861 518 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C VPS53P47061 822 aa2.1□□□□□ -2.07
SFB2YNL049C YGL081WP53156 320 aa2.1□□□□□ -2.07
SFB2YNL049C TFB2Q02939 513 aa2.1□□□□□ -2.07
SFB2YNL049C THI72Q08579 599 aa2.1□□□□□ -2.07
SFB2YNL049C YPR071WQ12346 211 aa2.1□□□□□ -2.07
SFB2YNL049C AHC1Q12433 566 aa2.1□□□□□ -2.07
SFB2YNL049C RPL11BQ3E757 174 aaPredicted RBP2.1□□□□□ -2.07
SFB2YNL049C SWI1P09547 1314 aa2.1□□□□□ -2.07
SFB2YNL049C TOM70P07213 617 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C PEX6P33760 1030 aa2.1□□□□□ -2.07
SFB2YNL049C APL2P36000 726 aaPredicted RBP2.1□□□□□ -2.07
SFB2YNL049C UIP5P36137 443 aa2.1□□□□□ -2.07
SFB2YNL049C SNF7P39929 240 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C TIF4631P39935 952 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C YFL054CP43549 646 aa2.1□□□□□ -2.07
SFB2YNL049C UBP6P43593 499 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C JJJ3P47138 172 aa2.1□□□□□ -2.07
SFB2YNL049C SOL4P53315 255 aa2.1□□□□□ -2.07
SFB2YNL049C HEF3P53978 1044 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C MDM1Q01846 1127 aa2.1□□□□□ -2.07
SFB2YNL049C UGO1Q03327 502 aa2.1□□□□□ -2.07
SFB2YNL049C DOT1Q04089 582 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C DUS3Q06053 668 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C YLR257WQ06146 321 aaKnown RBP2.1□□□□□ -2.07
SFB2YNL049C GIC2Q06648 383 aa2.1□□□□□ -2.07
SFB2YNL049C YLL054CQ12244 843 aa2.1□□□□□ -2.07
SFB2YNL049C SUT2Q12286 268 aa2.1□□□□□ -2.07
SFB2YNL049C SPO21Q12411 609 aa2.1□□□□□ -2.07
SFB2YNL049C AAR2P32357 355 aaPredicted RBP2.09□□□□□ -2.07
SFB2YNL049C AFR1P33304 620 aa2.09□□□□□ -2.07
SFB2YNL049C HSE1P38753 452 aa2.09□□□□□ -2.07
SFB2YNL049C FUN12P39730 1002 aaKnown RBP2.09□□□□□ -2.07
SFB2YNL049C MPP10P47083 593 aaKnown RBP2.09□□□□□ -2.07
SFB2YNL049C MMR1Q06324 491 aa2.09□□□□□ -2.07
SFB2YNL049C GUD1Q07729 489 aa2.09□□□□□ -2.07
SFB2YNL049C YPL260WQ08977 551 aa2.09□□□□□ -2.07
SFB2YNL049C YOR223WQ12015 292 aa2.09□□□□□ -2.07
SFB2YNL049C NHA1Q99271 985 aa2.09□□□□□ -2.07
SFB2YNL049C CDC11P32458 415 aa2.09□□□□□ -2.08
SFB2YNL049C YKL151CP36059 337 aa2.09□□□□□ -2.08
SFB2YNL049C PET10P36139 283 aa2.09□□□□□ -2.08
SFB2YNL049C GPT2P36148 743 aa2.09□□□□□ -2.08
SFB2YNL049C TOM71P38825 639 aaKnown RBP2.09□□□□□ -2.08
SFB2YNL049C FOL2P51601 243 aaKnown RBP2.09□□□□□ -2.08
SFB2YNL049C BUL2Q03758 920 aaKnown RBP2.09□□□□□ -2.08
SFB2YNL049C WHI4Q07655 649 aaKnown RBP2.09□□□□□ -2.08
SFB2YNL049C TY1A-NL1Q12391 440 aaKnown RBP2.09□□□□□ -2.08
SFB2YNL049C MDM12Q92328 271 aa2.09□□□□□ -2.08
SFB2YNL049C NPP1P25353 742 aa2.08□□□□□ -2.08
SFB2YNL049C RME1P32338 300 aaKnown RBP2.08□□□□□ -2.08
SFB2YNL049C SFP1P32432 683 aa2.08□□□□□ -2.08
SFB2YNL049C EUG1P32474 517 aa2.08□□□□□ -2.08
SFB2YNL049C DOM34P33309 386 aa2.08□□□□□ -2.08
SFB2YNL049C MCD4P36051 919 aa2.08□□□□□ -2.08
SFB2YNL049C STV1P37296 890 aa2.08□□□□□ -2.08
SFB2YNL049C YRO2P38079 344 aa2.08□□□□□ -2.08
SFB2YNL049C RRM3P38766 723 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms