RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	WHI3	P34761	661 aa	Known RBP	5.19	□□□□□ -1.58
RCM1	YNL022C	UGA2	P38067	497 aa		5.19	□□□□□ -1.58
RCM1	YNL022C	NMD3	P38861	518 aa	Known RBP	5.19	□□□□□ -1.58
RCM1	YNL022C	ERP2	P39704	215 aa		5.19	□□□□□ -1.58
RCM1	YNL022C	SAH1	P39954	449 aa	Known RBP	5.19	□□□□□ -1.58
RCM1	YNL022C	MXR1	P40029	184 aa		5.19	□□□□□ -1.58
RCM1	YNL022C	AIM21	P40563	679 aa		5.19	□□□□□ -1.58
RCM1	YNL022C	UBP6	P43593	499 aa	Known RBP	5.19	□□□□□ -1.58
RCM1	YNL022C	AUS1	Q08409	1394 aa		5.19	□□□□□ -1.58
RCM1	YNL022C	ADE6	P38972	1358 aa	Known RBP	5.18	□□□□□ -1.58
RCM1	YNL022C	ADE8	P04161	214 aa		5.18	□□□□□ -1.58
RCM1	YNL022C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
RCM1	YNL022C	RPS24A	P0CX31	135 aa	Known RBP	5.18	□□□□□ -1.58
RCM1	YNL022C	RPS24B	P0CX32	135 aa	Known RBP	5.18	□□□□□ -1.58
RCM1	YNL022C	SAM35	P14693	329 aa		5.18	□□□□□ -1.58
RCM1	YNL022C	CDC12	P32468	407 aa	Known RBP	5.18	□□□□□ -1.58
RCM1	YNL022C	RRT14	P40470	206 aa		5.18	□□□□□ -1.58
RCM1	YNL022C	EAR1	Q03212	550 aa		5.18	□□□□□ -1.58
RCM1	YNL022C	MTC5	Q03897	1148 aa		5.18	□□□□□ -1.58
RCM1	YNL022C	TAP42	Q04372	366 aa		5.18	□□□□□ -1.58
RCM1	YNL022C	HIM1	Q06674	414 aa		5.18	□□□□□ -1.58
RCM1	YNL022C	DBP2	P24783	546 aa	Known RBP	5.17	□□□□□ -1.58
RCM1	YNL022C	NAM7	P30771	971 aa	Known RBP	5.17	□□□□□ -1.58
RCM1	YNL022C	PRO1	P32264	428 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	KAE1	P36132	386 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	YBR071W	P38243	211 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	PEA2	P40091	420 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	ALG2	P43636	503 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	RRP46	P53256	223 aa	Predicted RBP	5.17	□□□□□ -1.58
RCM1	YNL022C	YPL034W	Q03083	165 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	LCD1	Q04377	747 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	TRE1	Q08919	783 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	YPR071W	Q12346	211 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	NKP1	Q12493	238 aa		5.17	□□□□□ -1.58
RCM1	YNL022C	RRP5	Q05022	1729 aa	Known RBP	5.17	□□□□□ -1.58
RCM1	YNL022C	MSD1	P15179	658 aa	Known RBP	5.16	□□□□□ -1.58
RCM1	YNL022C	EUG1	P32474	517 aa		5.16	□□□□□ -1.58
RCM1	YNL022C	OYE3	P41816	400 aa	Predicted RBP	5.16	□□□□□ -1.58
RCM1	YNL022C	GPG1	P53130	126 aa		5.16	□□□□□ -1.58
RCM1	YNL022C	COG6	P53959	839 aa		5.16	□□□□□ -1.58
RCM1	YNL022C	YDL144C	Q07589	356 aa		5.16	□□□□□ -1.58
RCM1	YNL022C	RSB1	Q08417	382 aa		5.16	□□□□□ -1.58
RCM1	YNL022C	YLR122C	Q12312	125 aa		5.16	□□□□□ -1.58
RCM1	YNL022C	RAD18	P10862	487 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	MTC2	P34246	357 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	PET10	P36139	283 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	YKR078W	P36158	585 aa	Known RBP	5.15	□□□□□ -1.58
RCM1	YNL022C	SEC26	P41810	973 aa	Known RBP	5.15	□□□□□ -1.58
RCM1	YNL022C	TY4A-J	P47023	414 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	MPP10	P47083	593 aa	Known RBP	5.15	□□□□□ -1.58
RCM1	YNL022C	CCM1	P48237	864 aa	Predicted RBP	5.15	□□□□□ -1.58
RCM1	YNL022C	PRP43	P53131	767 aa	Known RBP	5.15	□□□□□ -1.58
RCM1	YNL022C	YGR021W	P53212	290 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	YLR001C	Q07895	862 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	RSC58	Q07979	502 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	MCA1	Q08601	432 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	MPD2	Q99316	277 aa		5.15	□□□□□ -1.58
RCM1	YNL022C	URB1	P34241	1764 aa	Known RBP	5.15	□□□□□ -1.59
RCM1	YNL022C	BI4	P03879	638 aa		5.14	□□□□□ -1.59
RCM1	YNL022C	YRO2	P38079	344 aa		5.14	□□□□□ -1.59
RCM1	YNL022C	FUN12	P39730	1002 aa	Known RBP	5.14	□□□□□ -1.59
RCM1	YNL022C	ENV11	P53246	860 aa		5.14	□□□□□ -1.59
RCM1	YNL022C	HIF1	Q12373	385 aa		5.14	□□□□□ -1.59
RCM1	YNL022C	YRF1-2	P40105	1681 aa		5.14	□□□□□ -1.59
RCM1	YNL022C	FKS3	Q04952	1785 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	RPP0	P05317	312 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	SRD1	P09007	221 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	SST2	P11972	698 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	RPA135	P22138	1203 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	RPC82	P32349	654 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	PRP19	P32523	503 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	TFC4	P33339	1025 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	MGS1	P40151	587 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	VPS27	P40343	622 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	GPP1	P41277	250 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	RPS0B	P46654	252 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	PAP2	P53632	584 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	MTQ2	Q03920	221 aa	Predicted RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	HRQ1	Q05549	1077 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	CDC45	Q08032	650 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	MDM38	Q08179	573 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	RVB2	Q12464	471 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	CDC9	P04819	755 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	SUI2	P20459	304 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	ACE2	P21192	770 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	FUN30	P31380	1131 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	TOA1	P32773	286 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	MRS6	P32864	603 aa	Known RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	PEX7	P39108	375 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	RTR1	P40084	226 aa	Predicted RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	UBX4	P54730	416 aa		5.13	□□□□□ -1.59
RCM1	YNL022C	RCL1	Q08096	367 aa	Predicted RBP	5.13	□□□□□ -1.59
RCM1	YNL022C	APC1	P53886	1748 aa		5.12	□□□□□ -1.59
RCM1	YNL022C	ADP1	P25371	1049 aa		5.12	□□□□□ -1.59
RCM1	YNL022C	PLC1	P32383	869 aa		5.12	□□□□□ -1.59
RCM1	YNL022C	AIM26	P32858	118 aa		5.12	□□□□□ -1.59
RCM1	YNL022C	REC104	P33323	182 aa		5.12	□□□□□ -1.59
RCM1	YNL022C	YEL1	P34225	687 aa		5.12	□□□□□ -1.59
RCM1	YNL022C	TRZ1	P36159	838 aa	Predicted RBP	5.12	□□□□□ -1.59
RCM1	YNL022C	YER158C	P40095	573 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms