RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C MTC2P34246 357 aa1.06□□□□□ -2.24
RKR1YMR247C WHI3P34761 661 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C THI80P35202 319 aa1.06□□□□□ -2.24
RKR1YMR247C VBA5P36172 582 aa1.06□□□□□ -2.24
RKR1YMR247C PIH1P38768 344 aa1.06□□□□□ -2.24
RKR1YMR247C YHR078WP38799 552 aa1.06□□□□□ -2.24
RKR1YMR247C BDH2P39713 417 aa1.06□□□□□ -2.24
RKR1YMR247C PRY1P47032 299 aa1.06□□□□□ -2.24
RKR1YMR247C CTH1P47976 325 aa1.06□□□□□ -2.24
RKR1YMR247C MTC3P53077 123 aa1.06□□□□□ -2.24
RKR1YMR247C YGR283CP53336 341 aaPredicted RBP1.06□□□□□ -2.24
RKR1YMR247C HOL1P53389 586 aa1.06□□□□□ -2.24
RKR1YMR247C TAF8Q03750 510 aa1.06□□□□□ -2.24
RKR1YMR247C JIP5Q06214 492 aaPredicted RBP1.06□□□□□ -2.24
RKR1YMR247C BDF2Q07442 638 aa1.06□□□□□ -2.24
RKR1YMR247C THI21Q08975 551 aa1.06□□□□□ -2.24
RKR1YMR247C TAD3Q9URQ3 322 aa1.06□□□□□ -2.24
RKR1YMR247C ERG20P08524 352 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C MLS1P30952 554 aa1.06□□□□□ -2.24
RKR1YMR247C CYS3P31373 394 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C SFP1P32432 683 aa1.06□□□□□ -2.24
RKR1YMR247C PEX6P33760 1030 aa1.06□□□□□ -2.24
RKR1YMR247C YKR075CP36155 307 aa1.06□□□□□ -2.24
RKR1YMR247C MIP6P38760 659 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C MGS1P40151 587 aa1.06□□□□□ -2.24
RKR1YMR247C RLP7P40693 322 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C RET2P43621 546 aa1.06□□□□□ -2.24
RKR1YMR247C YGL176CP46945 554 aa1.06□□□□□ -2.24
RKR1YMR247C AVT1P47082 602 aa1.06□□□□□ -2.24
RKR1YMR247C YJR039WP47107 1121 aa1.06□□□□□ -2.24
RKR1YMR247C MSE1P48525 536 aa1.06□□□□□ -2.24
RKR1YMR247C PUS4P48567 403 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C CTK1Q03957 528 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C IOC4Q04213 475 aa1.06□□□□□ -2.24
RKR1YMR247C CRT10Q08226 957 aa1.06□□□□□ -2.24
RKR1YMR247C ATP4P05626 244 aa1.06□□□□□ -2.24
RKR1YMR247C NOT3P06102 836 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C SPC29P33419 253 aa1.06□□□□□ -2.24
RKR1YMR247C SDS22P36047 338 aa1.06□□□□□ -2.24
RKR1YMR247C YKR018CP36114 725 aa1.06□□□□□ -2.24
RKR1YMR247C FLR1P38124 548 aa1.06□□□□□ -2.24
RKR1YMR247C NPR3P38742 1146 aa1.06□□□□□ -2.24
RKR1YMR247C GIP4P39732 760 aa1.06□□□□□ -2.24
RKR1YMR247C QRI1P43123 477 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C SPT20P50875 604 aa1.06□□□□□ -2.24
RKR1YMR247C HFM1P51979 1187 aa1.06□□□□□ -2.24
RKR1YMR247C NRG1Q03125 231 aa1.06□□□□□ -2.24
RKR1YMR247C NHX1Q04121 633 aa1.06□□□□□ -2.24
RKR1YMR247C HFD1Q04458 532 aa1.06□□□□□ -2.24
RKR1YMR247C PSR2Q07949 397 aa1.06□□□□□ -2.24
RKR1YMR247C ENV7Q12003 364 aa1.06□□□□□ -2.24
RKR1YMR247C YTM1Q12024 460 aaPredicted RBP1.06□□□□□ -2.24
RKR1YMR247C GAL10P04397 699 aa1.05□□□□□ -2.24
RKR1YMR247C CDC6P09119 513 aa1.05□□□□□ -2.24
RKR1YMR247C SEC15P22224 910 aa1.05□□□□□ -2.24
RKR1YMR247C VPS34P22543 875 aa1.05□□□□□ -2.24
RKR1YMR247C SRP40P32583 406 aaPredicted RBP1.05□□□□□ -2.24
RKR1YMR247C STE14P32584 239 aa1.05□□□□□ -2.24
RKR1YMR247C TOM71P38825 639 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C SLN1P39928 1220 aaPredicted RBP1.05□□□□□ -2.24
RKR1YMR247C ELO3P40319 345 aa1.05□□□□□ -2.24
RKR1YMR247C GZF3P42944 551 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C UBA2P52488 636 aa1.05□□□□□ -2.24
RKR1YMR247C TEL2P53038 688 aa1.05□□□□□ -2.24
RKR1YMR247C YLR224WQ05947 369 aa1.05□□□□□ -2.24
RKR1YMR247C YPR196WQ06595 470 aa1.05□□□□□ -2.24
RKR1YMR247C CSR1Q06705 408 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C TRP3P00937 484 aa1.05□□□□□ -2.24
RKR1YMR247C TOM70P07213 617 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C PYC1P11154 1178 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C ARE1P25628 610 aa1.05□□□□□ -2.24
RKR1YMR247C HBS1P32769 611 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C DUR3P33413 735 aa1.05□□□□□ -2.24
RKR1YMR247C YKL222CP35995 705 aa1.05□□□□□ -2.24
RKR1YMR247C YRO2P38079 344 aa1.05□□□□□ -2.24
RKR1YMR247C YBP1P38315 674 aa1.05□□□□□ -2.24
RKR1YMR247C ZIP2P53061 704 aa1.05□□□□□ -2.24
RKR1YMR247C ARG5,6Q01217 863 aa1.05□□□□□ -2.24
RKR1YMR247C PTA1Q01329 785 aaPredicted RBP1.05□□□□□ -2.24
RKR1YMR247C FDC1Q03034 503 aa1.05□□□□□ -2.24
RKR1YMR247C VBA4Q04602 768 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C ENT2Q05785 613 aa1.05□□□□□ -2.24
RKR1YMR247C YSH1Q06224 779 aaPredicted RBP1.05□□□□□ -2.24
RKR1YMR247C FLC1Q08967 793 aa1.05□□□□□ -2.24
RKR1YMR247C NKP1Q12493 238 aa1.05□□□□□ -2.24
RKR1YMR247C VPS5Q92331 675 aa1.05□□□□□ -2.24
RKR1YMR247C CWH43P25618 953 aa1.05□□□□□ -2.24
RKR1YMR247C CDC15P27636 974 aa1.05□□□□□ -2.24
RKR1YMR247C MRPL36P36531 177 aa1.05□□□□□ -2.24
RKR1YMR247C APN2P38207 520 aa1.05□□□□□ -2.24
RKR1YMR247C SRP68P38687 599 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C MNN11P46985 422 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C CTR1P49573 406 aa1.05□□□□□ -2.24
RKR1YMR247C YGR125WP53273 1036 aa1.05□□□□□ -2.24
RKR1YMR247C MRPS35P53292 345 aa1.05□□□□□ -2.24
RKR1YMR247C SDH1Q00711 640 aa1.05□□□□□ -2.24
RKR1YMR247C YDR306CQ06640 478 aa1.05□□□□□ -2.24
RKR1YMR247C CRD1Q07560 283 aa1.05□□□□□ -2.24
RKR1YMR247C NPC2Q12408 173 aa1.05□□□□□ -2.24
RKR1YMR247C KCS1Q12494 1050 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms