RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W PTC5Q12511 572 aa1.98□□□□□ -2.09
RTP1YMR185W NFS1P25374 497 aa1.97□□□□□ -2.09
RTP1YMR185W PRP45P28004 379 aaPredicted RBP1.97□□□□□ -2.09
RTP1YMR185W NIP1P32497 812 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W MIP6P38760 659 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W SEC9P40357 651 aa1.97□□□□□ -2.09
RTP1YMR185W SHQ1P40486 507 aaPredicted RBP1.97□□□□□ -2.09
RTP1YMR185W GTS1P40956 396 aa1.97□□□□□ -2.09
RTP1YMR185W MIC19P43594 170 aa1.97□□□□□ -2.09
RTP1YMR185W AIP1P46680 615 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W YBP2P53169 641 aa1.97□□□□□ -2.09
RTP1YMR185W RTC4P53850 401 aa1.97□□□□□ -2.09
RTP1YMR185W GDE1Q02979 1223 aa1.97□□□□□ -2.09
RTP1YMR185W EIS1Q05050 843 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W MRD1Q06106 887 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W SFH1Q06168 426 aa1.97□□□□□ -2.09
RTP1YMR185W ESF1Q06344 628 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W YOR352WQ08816 343 aa1.97□□□□□ -2.09
RTP1YMR185W YPL225WQ08971 146 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W DAS2Q12084 232 aa1.97□□□□□ -2.09
RTP1YMR185W LSO1Q3E827 93 aa1.97□□□□□ -2.09
RTP1YMR185W FKS1P38631 1876 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W FOB1O13329 566 aa1.97□□□□□ -2.09
RTP1YMR185W CDC8P00572 216 aa1.97□□□□□ -2.09
RTP1YMR185W CDC6P09119 513 aa1.97□□□□□ -2.09
RTP1YMR185W PMR1P13586 950 aa1.97□□□□□ -2.09
RTP1YMR185W PRP16P15938 1071 aaPredicted RBP1.97□□□□□ -2.09
RTP1YMR185W RAD57P25301 460 aa1.97□□□□□ -2.09
RTP1YMR185W APL2P36000 726 aaPredicted RBP1.97□□□□□ -2.09
RTP1YMR185W MYO3P36006 1272 aa1.97□□□□□ -2.09
RTP1YMR185W PPX1P38698 397 aa1.97□□□□□ -2.09
RTP1YMR185W PTC7P38797 343 aa1.97□□□□□ -2.09
RTP1YMR185W VFA1P40080 203 aa1.97□□□□□ -2.09
RTP1YMR185W THI12P42883 340 aa1.97□□□□□ -2.09
RTP1YMR185W THI5P43534 340 aa1.97□□□□□ -2.09
RTP1YMR185W YJR039WP47107 1121 aa1.97□□□□□ -2.09
RTP1YMR185W THI11P47183 340 aa1.97□□□□□ -2.09
RTP1YMR185W GCV1P48015 400 aa1.97□□□□□ -2.09
RTP1YMR185W YGR237CP50089 785 aa1.97□□□□□ -2.09
RTP1YMR185W HFM1P51979 1187 aa1.97□□□□□ -2.09
RTP1YMR185W VPS4P52917 437 aa1.97□□□□□ -2.09
RTP1YMR185W YNL193WP53870 558 aa1.97□□□□□ -2.09
RTP1YMR185W UFD2P54860 961 aa1.97□□□□□ -2.09
RTP1YMR185W RPL22BP56628 122 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W SSY1Q03770 852 aa1.97□□□□□ -2.09
RTP1YMR185W VPS64Q03944 604 aa1.97□□□□□ -2.09
RTP1YMR185W MMR1Q06324 491 aa1.97□□□□□ -2.09
RTP1YMR185W THI13Q07748 340 aa1.97□□□□□ -2.09
RTP1YMR185W ESC8Q08119 714 aa1.97□□□□□ -2.09
RTP1YMR185W TIP41Q12199 356 aa1.97□□□□□ -2.09
RTP1YMR185W HSP82P02829 709 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W YET1P35723 206 aa1.97□□□□□ -2.09
RTP1YMR185W MAL31P38156 614 aa1.97□□□□□ -2.09
RTP1YMR185W RXT2P38255 430 aa1.97□□□□□ -2.09
RTP1YMR185W GDT1P38301 280 aaPredicted RBP1.97□□□□□ -2.09
RTP1YMR185W SMF1P38925 575 aa1.97□□□□□ -2.09
RTP1YMR185W EPL1P43572 832 aa1.97□□□□□ -2.09
RTP1YMR185W OSW7P43611 510 aa1.97□□□□□ -2.09
RTP1YMR185W ALG2P43636 503 aa1.97□□□□□ -2.09
RTP1YMR185W TRS85P46944 698 aa1.97□□□□□ -2.09
RTP1YMR185W IRC8P47046 822 aa1.97□□□□□ -2.09
RTP1YMR185W ENT3P47160 408 aa1.97□□□□□ -2.09
RTP1YMR185W YGL138CP53122 345 aa1.97□□□□□ -2.09
RTP1YMR185W UTP22P53254 1237 aaPredicted RBP1.97□□□□□ -2.09
RTP1YMR185W BTN2P53286 410 aa1.97□□□□□ -2.09
RTP1YMR185W RPS15Q01855 142 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W EBS1Q03466 884 aaKnown RBP1.97□□□□□ -2.09
RTP1YMR185W VTI1Q04338 217 aa1.97□□□□□ -2.09
RTP1YMR185W ATG13Q06628 738 aa1.97□□□□□ -2.09
RTP1YMR185W OPY2Q06810 360 aa1.97□□□□□ -2.09
RTP1YMR185W TRE1Q08919 783 aa1.97□□□□□ -2.09
RTP1YMR185W GAL11P19659 1081 aa1.96□□□□□ -2.1
RTP1YMR185W RNR3P21672 869 aaKnown RBP1.96□□□□□ -2.1
RTP1YMR185W RPL5P26321 297 aaKnown RBP1.96□□□□□ -2.1
RTP1YMR185W IMP2'P32351 346 aa1.96□□□□□ -2.1
RTP1YMR185W ECM32P32644 1121 aaKnown RBP1.96□□□□□ -2.1
RTP1YMR185W RAD5P32849 1169 aaPredicted RBP1.96□□□□□ -2.1
RTP1YMR185W UGA2P38067 497 aa1.96□□□□□ -2.1
RTP1YMR185W MMS21P38632 267 aa1.96□□□□□ -2.1
RTP1YMR185W QDR1P40475 563 aa1.96□□□□□ -2.1
RTP1YMR185W VTC2P43585 828 aa1.96□□□□□ -2.1
RTP1YMR185W ILM1P47155 203 aa1.96□□□□□ -2.1
RTP1YMR185W TAN1P53072 289 aaPredicted RBP1.96□□□□□ -2.1
RTP1YMR185W MON1P53129 644 aa1.96□□□□□ -2.1
RTP1YMR185W VPS30Q02948 557 aa1.96□□□□□ -2.1
RTP1YMR185W TPP1Q03796 238 aa1.96□□□□□ -2.1
RTP1YMR185W AFT2Q08957 416 aa1.96□□□□□ -2.1
RTP1YMR185W CDC37P06101 506 aaKnown RBP1.96□□□□□ -2.1
RTP1YMR185W PPR1P07272 904 aaPredicted RBP1.96□□□□□ -2.1
RTP1YMR185W MTF2P10849 440 aa1.96□□□□□ -2.1
RTP1YMR185W SPO12P17123 173 aa1.96□□□□□ -2.1
RTP1YMR185W COQ1P18900 473 aa1.96□□□□□ -2.1
RTP1YMR185W MRPS28P21771 286 aa1.96□□□□□ -2.1
RTP1YMR185W MSH3P25336 1018 aa1.96□□□□□ -2.1
RTP1YMR185W SEC65P29478 273 aa1.96□□□□□ -2.1
RTP1YMR185W ZUO1P32527 433 aaKnown RBP1.96□□□□□ -2.1
RTP1YMR185W SLD2P34252 453 aa1.96□□□□□ -2.1
RTP1YMR185W SQT1P35184 431 aa1.96□□□□□ -2.1
RTP1YMR185W PES4P39684 611 aa1.96□□□□□ -2.1
RTP1YMR185W GIP4P39732 760 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms