RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W YLR001CQ07895 862 aa4.52□□□□□ -1.69
CST9YLR394W RPP2AP05319 106 aaKnown RBP4.51□□□□□ -1.69
CST9YLR394W MCD4P36051 919 aa4.51□□□□□ -1.69
CST9YLR394W DSS1P39112 969 aa4.51□□□□□ -1.69
CST9YLR394W NIT3P49954 291 aa4.51□□□□□ -1.69
CST9YLR394W YDR514CQ04408 483 aa4.51□□□□□ -1.69
CST9YLR394W UPC2Q12151 913 aa4.51□□□□□ -1.69
CST9YLR394W LAS17Q12446 633 aa4.51□□□□□ -1.69
CST9YLR394W CYS3P31373 394 aaKnown RBP4.5□□□□□ -1.69
CST9YLR394W SCT1P32784 759 aa4.5□□□□□ -1.69
CST9YLR394W YIL108WP40483 696 aaKnown RBP4.5□□□□□ -1.69
CST9YLR394W URM1P40554 99 aaPredicted RBP4.5□□□□□ -1.69
CST9YLR394W NCS6P53088 359 aa4.5□□□□□ -1.69
CST9YLR394W NOG2P53742 486 aaKnown RBP4.5□□□□□ -1.69
CST9YLR394W NPC2Q12408 173 aa4.5□□□□□ -1.69
CST9YLR394W SRD1P09007 221 aa4.49□□□□□ -1.69
CST9YLR394W MIH1P23748 554 aa4.49□□□□□ -1.69
CST9YLR394W TYE7P33122 291 aaPredicted RBP4.49□□□□□ -1.69
CST9YLR394W CAF16P43569 289 aa4.49□□□□□ -1.69
CST9YLR394W YNL193WP53870 558 aa4.49□□□□□ -1.69
CST9YLR394W SLU7Q02775 382 aaKnown RBP4.49□□□□□ -1.69
CST9YLR394W YDR338CQ05497 695 aa4.49□□□□□ -1.69
CST9YLR394W HAL9Q12180 1030 aa4.49□□□□□ -1.69
CST9YLR394W YBR182C-AQ8TGU6 64 aa4.49□□□□□ -1.69
CST9YLR394W PCL2P25693 308 aa4.48□□□□□ -1.69
CST9YLR394W BUL1P48524 976 aa4.48□□□□□ -1.69
CST9YLR394W PSP2P50109 593 aaKnown RBP4.48□□□□□ -1.69
CST9YLR394W ZDS1P50111 915 aaKnown RBP4.48□□□□□ -1.69
CST9YLR394W REH1Q06709 432 aa4.48□□□□□ -1.69
CST9YLR394W THI21Q08975 551 aa4.48□□□□□ -1.69
CST9YLR394W YOR022CQ12204 715 aa4.48□□□□□ -1.69
CST9YLR394W ADR1P07248 1323 aa4.48□□□□□ -1.69
CST9YLR394W RAD18P10862 487 aa4.47□□□□□ -1.69
CST9YLR394W CTF8P38877 133 aa4.47□□□□□ -1.69
CST9YLR394W FPR3P38911 411 aaKnown RBP4.47□□□□□ -1.69
CST9YLR394W SDP1P40479 209 aa4.47□□□□□ -1.69
CST9YLR394W ENB1Q08299 606 aa4.47□□□□□ -1.69
CST9YLR394W RPS9AO13516 197 aaKnown RBP4.46□□□□□ -1.69
CST9YLR394W PRP4P20053 465 aaKnown RBP4.46□□□□□ -1.69
CST9YLR394W STO1P34160 861 aaKnown RBP4.46□□□□□ -1.69
CST9YLR394W MET13P53128 600 aa4.46□□□□□ -1.69
CST9YLR394W DUS1P53759 423 aaKnown RBP4.46□□□□□ -1.69
CST9YLR394W ASM4Q05166 528 aa4.46□□□□□ -1.69
CST9YLR394W GSY1P23337 708 aa4.46□□□□□ -1.7
CST9YLR394W KAR4P25583 335 aa4.46□□□□□ -1.7
CST9YLR394W ATG19P35193 415 aa4.46□□□□□ -1.7
CST9YLR394W ATF1P40353 525 aa4.46□□□□□ -1.7
CST9YLR394W RLP7P40693 322 aaKnown RBP4.46□□□□□ -1.7
CST9YLR394W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
CST9YLR394W SNP1Q00916 300 aaPredicted RBP4.46□□□□□ -1.7
CST9YLR394W VPS30Q02948 557 aa4.46□□□□□ -1.7
CST9YLR394W SFL1P20134 766 aa4.45□□□□□ -1.7
CST9YLR394W SEC21P32074 935 aaKnown RBP4.45□□□□□ -1.7
CST9YLR394W ALY2P47029 1046 aa4.45□□□□□ -1.7
CST9YLR394W YNR029CP53729 429 aaKnown RBP4.45□□□□□ -1.7
CST9YLR394W UTP14Q04500 899 aaKnown RBP4.45□□□□□ -1.7
CST9YLR394W GPR1Q12361 961 aa4.45□□□□□ -1.7
CST9YLR394W DIF1O13577 133 aa4.44□□□□□ -1.7
CST9YLR394W PRC1P00729 532 aa4.44□□□□□ -1.7
CST9YLR394W TUB3P09734 445 aaKnown RBP4.44□□□□□ -1.7
CST9YLR394W HMG1P12683 1054 aa4.44□□□□□ -1.7
CST9YLR394W PCM1P38628 557 aaKnown RBP4.44□□□□□ -1.7
CST9YLR394W SET5P38890 526 aaKnown RBP4.44□□□□□ -1.7
CST9YLR394W MGS1P40151 587 aa4.44□□□□□ -1.7
CST9YLR394W AIM14P53109 570 aa4.44□□□□□ -1.7
CST9YLR394W ATG33Q06485 197 aa4.44□□□□□ -1.7
CST9YLR394W YLR040CQ07988 224 aa4.44□□□□□ -1.7
CST9YLR394W YGR161W-CQ3E744 92 aa4.44□□□□□ -1.7
CST9YLR394W YLR149CQ99296 730 aa4.44□□□□□ -1.7
CST9YLR394W Q0142Q9ZZW4 58 aa4.44□□□□□ -1.7
CST9YLR394W SED4P25365 1065 aa4.43□□□□□ -1.7
CST9YLR394W EFT1P32324 842 aaKnown RBP4.43□□□□□ -1.7
CST9YLR394W HOG1P32485 435 aa4.43□□□□□ -1.7
CST9YLR394W SAP190P36123 1033 aa4.43□□□□□ -1.7
CST9YLR394W YHR078WP38799 552 aa4.43□□□□□ -1.7
CST9YLR394W SNM1P40993 198 aa4.43□□□□□ -1.7
CST9YLR394W QRI1P43123 477 aaKnown RBP4.43□□□□□ -1.7
CST9YLR394W SSY5P47002 699 aa4.43□□□□□ -1.7
CST9YLR394W ZIP2P53061 704 aa4.43□□□□□ -1.7
CST9YLR394W PUS2P53167 370 aa4.43□□□□□ -1.7
CST9YLR394W GUP2Q08929 609 aa4.43□□□□□ -1.7
CST9YLR394W SFP1P32432 683 aa4.42□□□□□ -1.7
CST9YLR394W YEL1P34225 687 aa4.42□□□□□ -1.7
CST9YLR394W UBP12P39538 1254 aa4.42□□□□□ -1.7
CST9YLR394W STU2P46675 888 aa4.42□□□□□ -1.7
CST9YLR394W UBC9P50623 157 aaPredicted RBP4.42□□□□□ -1.7
CST9YLR394W CRR1Q05790 422 aa4.42□□□□□ -1.7
CST9YLR394W YOL073CQ08232 322 aa4.42□□□□□ -1.7
CST9YLR394W CRP1P38845 465 aaKnown RBP4.41□□□□□ -1.7
CST9YLR394W SHR5P41912 237 aa4.41□□□□□ -1.7
CST9YLR394W GPG1P53130 126 aa4.41□□□□□ -1.7
CST9YLR394W ASI2P53895 289 aa4.41□□□□□ -1.7
CST9YLR394W ERG5P54781 538 aa4.41□□□□□ -1.7
CST9YLR394W NHX1Q04121 633 aa4.41□□□□□ -1.7
CST9YLR394W MUS81Q04149 632 aaPredicted RBP4.41□□□□□ -1.7
CST9YLR394W TMN2Q04562 672 aa4.41□□□□□ -1.7
CST9YLR394W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
CST9YLR394W YKR051WP36142 418 aa4.4□□□□□ -1.7
CST9YLR394W MRPS35P53292 345 aa4.4□□□□□ -1.7
CST9YLR394W THI73Q07904 523 aa4.4□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms