RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W PUS2P53167 370 aa3.88□□□□□ -1.79
SEC22YLR268W SMX3P54999 86 aaPredicted RBP3.88□□□□□ -1.79
SEC22YLR268W SEC5P89102 971 aa3.88□□□□□ -1.79
SEC22YLR268W APM1Q00776 475 aaPredicted RBP3.88□□□□□ -1.79
SEC22YLR268W NRG1Q03125 231 aa3.88□□□□□ -1.79
SEC22YLR268W TAF3Q12297 353 aa3.88□□□□□ -1.79
SEC22YLR268W HBS1P32769 611 aaKnown RBP3.87□□□□□ -1.79
SEC22YLR268W PZF1P39933 429 aa3.87□□□□□ -1.79
SEC22YLR268W IRR1P40541 1150 aa3.87□□□□□ -1.79
SEC22YLR268W MUS81Q04149 632 aaPredicted RBP3.87□□□□□ -1.79
SEC22YLR268W ATG11Q12527 1178 aa3.87□□□□□ -1.79
SEC22YLR268W YLR415CO13578 112 aa3.86□□□□□ -1.79
SEC22YLR268W PRP9P19736 530 aaKnown RBP3.86□□□□□ -1.79
SEC22YLR268W CBR1P38626 284 aaKnown RBP3.86□□□□□ -1.79
SEC22YLR268W CWC24P53769 259 aa3.86□□□□□ -1.79
SEC22YLR268W HAL9Q12180 1030 aa3.86□□□□□ -1.79
SEC22YLR268W SPO11P23179 398 aa3.85□□□□□ -1.79
SEC22YLR268W BCD1P38772 366 aa3.85□□□□□ -1.79
SEC22YLR268W YJL206CP39529 758 aa3.85□□□□□ -1.79
SEC22YLR268W MAD1P40957 749 aa3.85□□□□□ -1.79
SEC22YLR268W YAP1802P53309 568 aa3.85□□□□□ -1.79
SEC22YLR268W RPN13O13563 156 aa3.84□□□□□ -1.79
SEC22YLR268W HIS7P33734 552 aaKnown RBP3.84□□□□□ -1.79
SEC22YLR268W SIC1P38634 284 aa3.84□□□□□ -1.79
SEC22YLR268W HOS4P40480 1083 aa3.84□□□□□ -1.79
SEC22YLR268W CCT7P42943 550 aaKnown RBP3.84□□□□□ -1.79
SEC22YLR268W UBC11P52492 156 aa3.84□□□□□ -1.79
SEC22YLR268W MRI1Q06489 411 aaKnown RBP3.84□□□□□ -1.79
SEC22YLR268W PRI2P20457 528 aa3.83□□□□□ -1.8
SEC22YLR268W CYS3P31373 394 aaKnown RBP3.83□□□□□ -1.8
SEC22YLR268W ORC2P32833 620 aa3.83□□□□□ -1.8
SEC22YLR268W YEL020CP39994 560 aa3.83□□□□□ -1.8
SEC22YLR268W PFA3P42836 336 aa3.83□□□□□ -1.8
SEC22YLR268W NOG2P53742 486 aaKnown RBP3.83□□□□□ -1.8
SEC22YLR268W ASM4Q05166 528 aa3.83□□□□□ -1.8
SEC22YLR268W ENV7Q12003 364 aa3.83□□□□□ -1.8
SEC22YLR268W CDC11P32458 415 aa3.82□□□□□ -1.8
SEC22YLR268W EMP70P32802 667 aa3.82□□□□□ -1.8
SEC22YLR268W SAK1P38990 1142 aa3.82□□□□□ -1.8
SEC22YLR268W BAP3P41815 604 aa3.82□□□□□ -1.8
SEC22YLR268W SSY5P47002 699 aa3.82□□□□□ -1.8
SEC22YLR268W TGL5Q12043 749 aa3.82□□□□□ -1.8
SEC22YLR268W SIR3P06701 978 aa3.81□□□□□ -1.8
SEC22YLR268W HIR1P32479 840 aa3.81□□□□□ -1.8
SEC22YLR268W STE5P32917 917 aa3.81□□□□□ -1.8
SEC22YLR268W PFD1P46988 109 aa3.81□□□□□ -1.8
SEC22YLR268W SVF1Q05515 481 aa3.81□□□□□ -1.8
SEC22YLR268W YOR022CQ12204 715 aa3.81□□□□□ -1.8
SEC22YLR268W PET10P36139 283 aa3.8□□□□□ -1.8
SEC22YLR268W NDC80P40460 691 aa3.8□□□□□ -1.8
SEC22YLR268W YPR071WQ12346 211 aa3.8□□□□□ -1.8
SEC22YLR268W GPR1Q12361 961 aa3.8□□□□□ -1.8
SEC22YLR268W YBR259WP38338 688 aa3.79□□□□□ -1.8
SEC22YLR268W REV7P38927 245 aa3.79□□□□□ -1.8
SEC22YLR268W BDH2P39713 417 aa3.79□□□□□ -1.8
SEC22YLR268W SPF1P39986 1215 aaKnown RBP3.79□□□□□ -1.8
SEC22YLR268W NIT3P49954 291 aa3.79□□□□□ -1.8
SEC22YLR268W RSC3Q06639 885 aa3.79□□□□□ -1.8
SEC22YLR268W THI21Q08975 551 aa3.79□□□□□ -1.8
SEC22YLR268W PRC1P00729 532 aa3.78□□□□□ -1.8
SEC22YLR268W PYC1P11154 1178 aaKnown RBP3.78□□□□□ -1.8
SEC22YLR268W ECM1P39715 212 aa3.78□□□□□ -1.8
SEC22YLR268W PAC2P39937 518 aa3.78□□□□□ -1.8
SEC22YLR268W ARG2P40360 574 aa3.78□□□□□ -1.8
SEC22YLR268W SEG1Q04279 960 aa3.78□□□□□ -1.8
SEC22YLR268W DAL7P21826 554 aa3.77□□□□□ -1.81
SEC22YLR268W VPS34P22543 875 aa3.77□□□□□ -1.81
SEC22YLR268W CCT3P39077 534 aaKnown RBP3.77□□□□□ -1.81
SEC22YLR268W UTP8P53276 713 aaKnown RBP3.77□□□□□ -1.81
SEC22YLR268W RIM13Q03792 727 aa3.77□□□□□ -1.81
SEC22YLR268W JIP5Q06214 492 aaPredicted RBP3.77□□□□□ -1.81
SEC22YLR268W YKL033W-AQ86ZR7 236 aa3.77□□□□□ -1.81
SEC22YLR268W TOP3P13099 656 aa3.76□□□□□ -1.81
SEC22YLR268W HOM2P13663 365 aaKnown RBP3.76□□□□□ -1.81
SEC22YLR268W MSD1P15179 658 aaKnown RBP3.76□□□□□ -1.81
SEC22YLR268W EMC3P36039 253 aa3.76□□□□□ -1.81
SEC22YLR268W GLG1P36143 616 aa3.76□□□□□ -1.81
SEC22YLR268W YBR284WP38150 797 aa3.76□□□□□ -1.81
SEC22YLR268W UBS1P38290 277 aa3.76□□□□□ -1.81
SEC22YLR268W YBR184WP38299 523 aa3.76□□□□□ -1.81
SEC22YLR268W ALR2P43553 858 aa3.76□□□□□ -1.81
SEC22YLR268W MRK1P50873 501 aa3.76□□□□□ -1.81
SEC22YLR268W TEX1P53851 422 aaKnown RBP3.76□□□□□ -1.81
SEC22YLR268W FMP25Q08023 583 aa3.76□□□□□ -1.81
SEC22YLR268W LTP1P40347 161 aa3.75□□□□□ -1.81
SEC22YLR268W GAT1P43574 510 aa3.75□□□□□ -1.81
SEC22YLR268W BNA3P47039 444 aaKnown RBP3.75□□□□□ -1.81
SEC22YLR268W CTR1P49573 406 aa3.75□□□□□ -1.81
SEC22YLR268W GAD1Q04792 585 aa3.75□□□□□ -1.81
SEC22YLR268W TDA5Q06417 326 aaKnown RBP3.75□□□□□ -1.81
SEC22YLR268W HBN1Q96VH4 193 aa3.75□□□□□ -1.81
SEC22YLR268W YUR1P26725 428 aa3.74□□□□□ -1.81
SEC22YLR268W TAD1P53065 400 aa3.74□□□□□ -1.81
SEC22YLR268W YCL002CP25565 263 aa3.73□□□□□ -1.81
SEC22YLR268W SET5P38890 526 aaKnown RBP3.73□□□□□ -1.81
SEC22YLR268W LRS4Q04087 347 aaKnown RBP3.73□□□□□ -1.81
SEC22YLR268W REH1Q06709 432 aa3.73□□□□□ -1.81
SEC22YLR268W OSW1Q08692 278 aa3.73□□□□□ -1.81
SEC22YLR268W SAP190P36123 1033 aa3.72□□□□□ -1.81
SEC22YLR268W MTR3P48240 250 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms